| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is nitA [H]
Identifier: 91784392
GI number: 91784392
Start: 3362704
End: 3363750
Strand: Reverse
Name: nitA [H]
Synonym: Bxe_A1408
Alternate gene names: 91784392
Gene position: 3363750-3362704 (Counterclockwise)
Preceding gene: 91784393
Following gene: 91784391
Centisome position: 68.71
GC content: 64.18
Gene sequence:
>1047_bases ATGTCCGACAAATCGACCGGCAAGCGCATCGTGCGCGCCGCGGCGGTCCAGATCGCACCGGACTTCGAGCGCAGCGGCGG CACGCTCGAAAAGGTTTGCGAGGCCATCGAACAGGCGGCGCGCGAAGGCGTGCAACTGATCGTATTTCCCGAAACCTTCG TGCCGTATTACCCGTACTTCTCTTTCGTGCGGCCGCCCGTGGCCTCCGGCGCCGATCACATGAAACTCTACGAAGAGGCC GTGGTGGTGCCGGGTCCCGTGACGCAGGCGGTGGCCGAGCAGGCGCGTTTGCACCGGATGGTGGTGGTGCTCGGCGTCAA CGAGCGCGATCACGGCAGCCTCTACAACACGCAACTGATCTTCGACGTGGACGGCCAGATCGTGCTCAAGCGCCGCAAGA TCACCCCGACGTTTCATGAACGGATGATCTGGGGCCAAGGCGACGCGGCCGGGCTGACGGTGGCGCGCACCGCGGTGGCA CGCGTGGGCGCGCTCGCCTGCTGGGAGCATTACAACCCGCTCGCGCGTTATGCGTTGATGACGCAGCACGAAGAGATTCA TTGCAGCCAGTTTCCCGGCTCGCTGGTGGGGCCGATCTTCGCCGATCAGATCGAGGTGACGATCCGCCATCACGCGCTGG AATCGGGATGTTTCGTCGTCAATGCAACGGGATGGCTGAGCGAAGCGCAGATTGCGTCCGTGACTCCGGATACGAATCTG CAGAGGGCGCTGCGCGGCGGCTGCAATACCGCGATCGTCTCTCCGGAAGGCCAGCATCTTGCCGAACCGTTGCGCGAGGG CGAGGGCATGGTGATCGCCGATCTCGACATGGCCTTGATCACCAAGCGCAAACGCATGATGGATTCGGTCGGCCATTACG CGCGCCCCGAACTGCTGAGCCTCGCCATCAACCGGCGGCCCGCGGAAACCGTGGCGCCGATGCAGGCGTGGCCGGCTGTC CCGGGCGCCGATTTCAATTCAACCGAAGGAGGATGCGATGAACGCCAGCGAACCGCTGTCGGCAGAGAGCCGGCAATTGA TGACTGA
Upstream 100 bases:
>100_bases ATCAGCCCGCTCGACGTGCTCGACATCCAGTTGCTCCACCGCAAGGACAACGCGCTGGTCATCCACACCTGGACGGTTTG ACGAAAGGCGAGTGACCACC
Downstream 100 bases:
>100_bases ATTGCAGTCCGCCGGTTTGCGGCTCGTCTCGCCGGATTCGGGCGCGGCGAGCCGGCGCGGCGGCGCGGGTCCGTCGGACC ACAAGGCGGTGACGGTGGAT
Product: putative nitrilase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MSDKSTGKRIVRAAAVQIAPDFERSGGTLEKVCEAIEQAAREGVQLIVFPETFVPYYPYFSFVRPPVASGADHMKLYEEA VVVPGPVTQAVAEQARLHRMVVVLGVNERDHGSLYNTQLIFDVDGQIVLKRRKITPTFHERMIWGQGDAAGLTVARTAVA RVGALACWEHYNPLARYALMTQHEEIHCSQFPGSLVGPIFADQIEVTIRHHALESGCFVVNATGWLSEAQIASVTPDTNL QRALRGGCNTAIVSPEGQHLAEPLREGEGMVIADLDMALITKRKRMMDSVGHYARPELLSLAINRRPAETVAPMQAWPAV PGADFNSTEGGCDERQRTAVGREPAIDD
Sequences:
>Translated_348_residues MSDKSTGKRIVRAAAVQIAPDFERSGGTLEKVCEAIEQAAREGVQLIVFPETFVPYYPYFSFVRPPVASGADHMKLYEEA VVVPGPVTQAVAEQARLHRMVVVLGVNERDHGSLYNTQLIFDVDGQIVLKRRKITPTFHERMIWGQGDAAGLTVARTAVA RVGALACWEHYNPLARYALMTQHEEIHCSQFPGSLVGPIFADQIEVTIRHHALESGCFVVNATGWLSEAQIASVTPDTNL QRALRGGCNTAIVSPEGQHLAEPLREGEGMVIADLDMALITKRKRMMDSVGHYARPELLSLAINRRPAETVAPMQAWPAV PGADFNSTEGGCDERQRTAVGREPAIDD >Mature_347_residues SDKSTGKRIVRAAAVQIAPDFERSGGTLEKVCEAIEQAAREGVQLIVFPETFVPYYPYFSFVRPPVASGADHMKLYEEAV VVPGPVTQAVAEQARLHRMVVVLGVNERDHGSLYNTQLIFDVDGQIVLKRRKITPTFHERMIWGQGDAAGLTVARTAVAR VGALACWEHYNPLARYALMTQHEEIHCSQFPGSLVGPIFADQIEVTIRHHALESGCFVVNATGWLSEAQIASVTPDTNLQ RALRGGCNTAIVSPEGQHLAEPLREGEGMVIADLDMALITKRKRMMDSVGHYARPELLSLAINRRPAETVAPMQAWPAVP GADFNSTEGGCDERQRTAVGREPAIDD
Specific function: Unknown
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Caenorhabditis elegans, GI17557111, Length=313, Percent_Identity=31.9488817891374, Blast_Score=139, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6322027, Length=185, Percent_Identity=31.3513513513514, Blast_Score=91, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000132 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: =3.5.5.7 [H]
Molecular weight: Translated: 38120; Mature: 37989
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS50007 PIPLC_X_DOMAIN ; PS00921 NITRIL_CHT_2 ; PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKSTGKRIVRAAAVQIAPDFERSGGTLEKVCEAIEQAAREGVQLIVFPETFVPYYPYF CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECHHHCCCCCHH SFVRPPVASGADHMKLYEEAVVVPGPVTQAVAEQARLHRMVVVLGVNERDHGSLYNTQLI HHCCCCCCCCCHHHHHHHHCEECCCCHHHHHHHHHHHEEEEEEEECCCCCCCCEECEEEE FDVDGQIVLKRRKITPTFHERMIWGQGDAAGLTVARTAVARVGALACWEHYNPLARYALM EECCCEEEEEECCCCHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH TQHEEIHCSQFPGSLVGPIFADQIEVTIRHHALESGCFVVNATGWLSEAQIASVTPDTNL HCCCHHHHHHCCCHHHCCHHHHHHEEEHHHHHHCCCCEEEECCCCCCCCEEEECCCCCHH QRALRGGCNTAIVSPEGQHLAEPLREGEGMVIADLDMALITKRKRMMDSVGHYARPELLS HHHHHCCCCEEEECCCCHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCCCCHHHHH LAINRRPAETVAPMQAWPAVPGADFNSTEGGCDERQRTAVGREPAIDD HHHCCCCCHHHCCHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC >Mature Secondary Structure SDKSTGKRIVRAAAVQIAPDFERSGGTLEKVCEAIEQAAREGVQLIVFPETFVPYYPYF CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECHHHCCCCCHH SFVRPPVASGADHMKLYEEAVVVPGPVTQAVAEQARLHRMVVVLGVNERDHGSLYNTQLI HHCCCCCCCCCHHHHHHHHCEECCCCHHHHHHHHHHHEEEEEEEECCCCCCCCEECEEEE FDVDGQIVLKRRKITPTFHERMIWGQGDAAGLTVARTAVARVGALACWEHYNPLARYALM EECCCEEEEEECCCCHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH TQHEEIHCSQFPGSLVGPIFADQIEVTIRHHALESGCFVVNATGWLSEAQIASVTPDTNL HCCCHHHHHHCCCHHHCCHHHHHHEEEHHHHHHCCCCEEEECCCCCCCCEEEECCCCCHH QRALRGGCNTAIVSPEGQHLAEPLREGEGMVIADLDMALITKRKRMMDSVGHYARPELLS HHHHHCCCCEEEECCCCHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCCCCHHHHH LAINRRPAETVAPMQAWPAVPGADFNSTEGGCDERQRTAVGREPAIDD HHHCCCCCHHHCCHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1400390 [H]