| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91784391
Identifier: 91784391
GI number: 91784391
Start: 3361641
End: 3362711
Strand: Reverse
Name: 91784391
Synonym: Bxe_A1409
Alternate gene names: NA
Gene position: 3362711-3361641 (Counterclockwise)
Preceding gene: 91784392
Following gene: 91784390
Centisome position: 68.69
GC content: 64.71
Gene sequence:
>1071_bases ATGACTGAATTGCAGTCCGCCGGTTTGCGGCTCGTCTCGCCGGATTCGGGCGCGGCGAGCCGGCGCGGCGGCGCGGGTCC GTCGGACCACAAGGCGGTGACGGTGGATGGCGTGACGATCATGGTGCCCGTGCATACGAGCACTGCATGGCACTCGCCGT TCGTGGCGCAAACACCGGATGCCAGTGGTTCGAGTGCGCTGCTGCGCGGCACGATTCCGATTGCCAGTATCAGTTTTCCG AAGGCGCCGCGTTTTTACGGCATGCAGACGCTCGACGGCGTACCGTACTCGCATATCGCCACGTTGCACGGTGCGGACGT ACTGGCGACTACCGTATTGCAAACCTGTATTCGCTATGAGAGCCGGCGCAAGAGCTGCAAGTTCTGCGCGATCGGGCAGT CGCTCGCGGCAGGCCGCACGATTGCGCGCAAGACGCCCGAGCAGCTCGCGGAAGTGGCGCGCGCGGCCGTGCTGCTCGAC GGCGTGAAGCATATGGTGCTGACCACCGGCACGCCACCCACGCCGGATCGCGGCGCGCAGATTCTGTGCGAGAGTGCGTT TGCAATCAAGGCCGCGGTCGATCTGCCGATCCAGGCACAATGCGAGCCGCCCGACGACGACCGCTGGTTCGCGCGCATGA AAGCGAGCGGCATCGACACACTCGGCATGCATCTCGAAGTCGTGACGCCTGAATTGCGCGAACGCATCATGCCGGGCAAG GCGAGCGTGCCGCTGTCGCGCTACATGGAAGCGTTCAGGTCCGCGGTGGCCGTGTTCGGACGCGGCCAGGTCAGCACCTA TATTCTCGCGGGGCTGGGCGACAGCGCCGAGGCGATTCTGACGATGTCGCGCGAGTTGATCGAACTCGGCGTCTATCCGT TCGTCGTGCCGTTCGTGCCGATCAGCGGCACGCCGCTCGAAGATCATCCGGCGCCCACACCCGAATTCATGAAGTCGGTT TTACAGCCGCTGGGCGGCATGCTCAATGCCGCGGCCATGCGTTCGAGCGATATCAAGGCGGGCTGCGGCAAATGCGGCGC GTGTTCGTCACTCTCATCGTACGAGGCGTGA
Upstream 100 bases:
>100_bases ATGCAGGCGTGGCCGGCTGTCCCGGGCGCCGATTTCAATTCAACCGAAGGAGGATGCGATGAACGCCAGCGAACCGCTGT CGGCAGAGAGCCGGCAATTG
Downstream 100 bases:
>100_bases TCATGTTCGGTGAAGCGATCGCAGGCGAGGCGCTGGACGGCGACATGGGTTTCGCGCCGTATGCGCCGAGTGAATTCCGT ATCAAGTGGACCACGTTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Radical SAM Domain-Containing Protein; Elongator /MiaB/NifB; Biotin Synthase-Related; Lipoic Acid Synthetase; Oxidoreductase; Iron-Molybdenum Cofactorbiosynthesis Nitrogenase NifB; Radical SAM Family Protein
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MTELQSAGLRLVSPDSGAASRRGGAGPSDHKAVTVDGVTIMVPVHTSTAWHSPFVAQTPDASGSSALLRGTIPIASISFP KAPRFYGMQTLDGVPYSHIATLHGADVLATTVLQTCIRYESRRKSCKFCAIGQSLAAGRTIARKTPEQLAEVARAAVLLD GVKHMVLTTGTPPTPDRGAQILCESAFAIKAAVDLPIQAQCEPPDDDRWFARMKASGIDTLGMHLEVVTPELRERIMPGK ASVPLSRYMEAFRSAVAVFGRGQVSTYILAGLGDSAEAILTMSRELIELGVYPFVVPFVPISGTPLEDHPAPTPEFMKSV LQPLGGMLNAAAMRSSDIKAGCGKCGACSSLSSYEA
Sequences:
>Translated_356_residues MTELQSAGLRLVSPDSGAASRRGGAGPSDHKAVTVDGVTIMVPVHTSTAWHSPFVAQTPDASGSSALLRGTIPIASISFP KAPRFYGMQTLDGVPYSHIATLHGADVLATTVLQTCIRYESRRKSCKFCAIGQSLAAGRTIARKTPEQLAEVARAAVLLD GVKHMVLTTGTPPTPDRGAQILCESAFAIKAAVDLPIQAQCEPPDDDRWFARMKASGIDTLGMHLEVVTPELRERIMPGK ASVPLSRYMEAFRSAVAVFGRGQVSTYILAGLGDSAEAILTMSRELIELGVYPFVVPFVPISGTPLEDHPAPTPEFMKSV LQPLGGMLNAAAMRSSDIKAGCGKCGACSSLSSYEA >Mature_355_residues TELQSAGLRLVSPDSGAASRRGGAGPSDHKAVTVDGVTIMVPVHTSTAWHSPFVAQTPDASGSSALLRGTIPIASISFPK APRFYGMQTLDGVPYSHIATLHGADVLATTVLQTCIRYESRRKSCKFCAIGQSLAAGRTIARKTPEQLAEVARAAVLLDG VKHMVLTTGTPPTPDRGAQILCESAFAIKAAVDLPIQAQCEPPDDDRWFARMKASGIDTLGMHLEVVTPELRERIMPGKA SVPLSRYMEAFRSAVAVFGRGQVSTYILAGLGDSAEAILTMSRELIELGVYPFVVPFVPISGTPLEDHPAPTPEFMKSVL QPLGGMLNAAAMRSSDIKAGCGKCGACSSLSSYEA
Specific function: Unknown
COG id: COG2516
COG function: function code R; Biotin synthase-related enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37581; Mature: 37449
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELQSAGLRLVSPDSGAASRRGGAGPSDHKAVTVDGVTIMVPVHTSTAWHSPFVAQTPD CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCEEEEEEECCCCCCCCCCCEECCC ASGSSALLRGTIPIASISFPKAPRFYGMQTLDGVPYSHIATLHGADVLATTVLQTCIRYE CCCCCEEEEECCCEEECCCCCCCCCCCCHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHH SRRKSCKFCAIGQSLAAGRTIARKTPEQLAEVARAAVLLDGVKHMVLTTGTPPTPDRGAQ HHHCCCCEEECCCHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHH ILCESAFAIKAAVDLPIQAQCEPPDDDRWFARMKASGIDTLGMHLEVVTPELRERIMPGK HHHHHHHHEEEEECCCCEECCCCCCCHHHHHHHHHCCCCCCCCEEEEECHHHHHHCCCCC ASVPLSRYMEAFRSAVAVFGRGQVSTYILAGLGDSAEAILTMSRELIELGVYPFVVPFVP CCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHEEEEEC ISGTPLEDHPAPTPEFMKSVLQPLGGMLNAAAMRSSDIKAGCGKCGACSSLSSYEA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TELQSAGLRLVSPDSGAASRRGGAGPSDHKAVTVDGVTIMVPVHTSTAWHSPFVAQTPD CCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEECCEEEEEEECCCCCCCCCCCEECCC ASGSSALLRGTIPIASISFPKAPRFYGMQTLDGVPYSHIATLHGADVLATTVLQTCIRYE CCCCCEEEEECCCEEECCCCCCCCCCCCHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHH SRRKSCKFCAIGQSLAAGRTIARKTPEQLAEVARAAVLLDGVKHMVLTTGTPPTPDRGAQ HHHCCCCEEECCCHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHH ILCESAFAIKAAVDLPIQAQCEPPDDDRWFARMKASGIDTLGMHLEVVTPELRERIMPGK HHHHHHHHEEEEECCCCEECCCCCCCHHHHHHHHHCCCCCCCCEEEEECHHHHHHCCCCC ASVPLSRYMEAFRSAVAVFGRGQVSTYILAGLGDSAEAILTMSRELIELGVYPFVVPFVP CCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHEEEEEC ISGTPLEDHPAPTPEFMKSVLQPLGGMLNAAAMRSSDIKAGCGKCGACSSLSSYEA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA