| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is boxC [H]
Identifier: 91784378
GI number: 91784378
Start: 3346559
End: 3348229
Strand: Reverse
Name: boxC [H]
Synonym: Bxe_A1422
Alternate gene names: 91784378
Gene position: 3348229-3346559 (Counterclockwise)
Preceding gene: 91784379
Following gene: 91784377
Centisome position: 68.39
GC content: 63.55
Gene sequence:
>1671_bases ATGTCCACAGCAGAAACCGCCGTCGCGCCGGTCGACTACCGCACCGATCCCTCGCAGTACAAGCATTGGAAGCTGAGCTT CAACGGTCCCGTCGCGACACTCGGCATCGATATCGCCGAGGACGGCGGTATCCGTGACGGCTACAAGCTGAAGCTGAATT CCTACGATCTCGGCGTCGACATCGAACTGCACGACGCAATACAGCGCATCCGCTTCGAGCATCCGGAAGTCAGAACCGTG GTGCTGACGAGCCTGAAGGATCGCGTGTTCTGCTCGGGCGCGAACATCTTCATGCTCGGTCTTTCCACCCATGCGTGGAA GGTCAACTTCTGCAAGTTCACCAACGAAACGCGCAATGGCCTGGAAGATTCATCGCGCCATTCGGGTCTGAAGTTTCTCG CGGCGGTCAACGGCGCCTGCGCGGGCGGCGGCTACGAACTCGCGCTCGCCTGCGACGAGATCTATCTGGTGGATGACCGT TCGTCGTCGGTATCGCTGCCGGAAGTGCCGCTGCTCGGCGTGTTGCCGGGCACCGGCGGCCTGACGCGCGTGACCGACAA GCGCAAGGTGCGTCACGATCGCGCCGACATCTTCTGCACGGTGGTGGAAGGCGTGCGCGGCGAGCGCGCAAAGGCATGGC GCCTCGTGGATGAAGTCGTGAAGCCGAACCAGTTCGACCAGGCGATCCAGGCGCGCGCGCTCGAACTCGCCGCGCAGAGC GATCGTCCCGCGCACGCGCAAGGCGTGCCGCTCACGCGGATCGAACGCACCGATCGCGAAGACGGCCTCACTTATAAAAC GCTCGACGTGACGATCGATCGTGCGAAGCGCATTGCAACGTTCACGGCCAAGGCTCCGCAAACCGAACCGCCCGCGAGTA TCGACGCCATCGTCGCAGCCGGCGCGAACTGGTGGCCGTTGAAATTCGCCCGCGAATTCGACGACGCGATCCTGTCCATG CGCACCAACGAGCTTGCGGTCGGCACGTGGGTCTTCAGGACCGAAGGCGACGCCCGCCATCTGCTCGCCGCGGACGCCTC GCTGATGCAGCACAAAGACCACTGGTTCGTGCGCGAGACGATCGGCCTGTTGCGCCGCACGCTGGCGCGTATCGACGTCT CGTCGCGTTCGCTGTTCGCGCTGATCGAGCCAGGCTCGTGCTTTGCCGGCACCTTCGCGGAACTCGCGTTCGCCGCCGAC CGCACTTATATGGCGGCGCTGCCGGCCAATGAAGACGAAGAGCCGGCCATCACGCTTTCGGAGGTCAACTTCGGCCTCTA TCCGATGGTTACGCATCAATCACGTCTGGCCCGGCGTTTCTATGAAGAAACGGAACCGCTCGATGCCGTGCGCTCCCGGA TCGGCCAGGCGATCAAGCCGGTCGAAGCCGAACGCCTCGGCCTCGTCACGGCGTCCCCCGACGACATTGACTGGGCCGAC GAAATCCGCATTGCGCTCGAAGAACGCGCGGCCATGTCGCCGGATGCCTTGACCGGACTCGAAGCGAATCTGCGCTTCAA CGGTCCGGAAACAATGGAGACGCGCATTTTCGGCCGTCTTACCGCGTGGCAGAACTGGATCTTCAACCGGCCGAACGCAG TGGGCGAGAAGGGCGCGCTCAAGGTGTACGGCAAGGGCAGCAAGGCGCAATTCGACGTCTCGCGCGTGTGA
Upstream 100 bases:
>100_bases AGGGTTTACTAGCAAACATGCACTAAAGTGCTTTACATGGGTTGAACGATGCACTATTGTTCAAAAAACAATTTGCATCG TCCAGTCAGGAGACGCCCCC
Downstream 100 bases:
>100_bases TTCACATTTGATGCGCGCCTGATGCACATTGCAACGCCATCGACGCCATCGACGCCATCGACGCAGCGAGCGCGAGCCGG AGCGCCACTTGCCCGACACG
Product: benzoyl-CoA-dihydrodiol lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 556; Mature: 555
Protein sequence:
>556_residues MSTAETAVAPVDYRTDPSQYKHWKLSFNGPVATLGIDIAEDGGIRDGYKLKLNSYDLGVDIELHDAIQRIRFEHPEVRTV VLTSLKDRVFCSGANIFMLGLSTHAWKVNFCKFTNETRNGLEDSSRHSGLKFLAAVNGACAGGGYELALACDEIYLVDDR SSSVSLPEVPLLGVLPGTGGLTRVTDKRKVRHDRADIFCTVVEGVRGERAKAWRLVDEVVKPNQFDQAIQARALELAAQS DRPAHAQGVPLTRIERTDREDGLTYKTLDVTIDRAKRIATFTAKAPQTEPPASIDAIVAAGANWWPLKFAREFDDAILSM RTNELAVGTWVFRTEGDARHLLAADASLMQHKDHWFVRETIGLLRRTLARIDVSSRSLFALIEPGSCFAGTFAELAFAAD RTYMAALPANEDEEPAITLSEVNFGLYPMVTHQSRLARRFYEETEPLDAVRSRIGQAIKPVEAERLGLVTASPDDIDWAD EIRIALEERAAMSPDALTGLEANLRFNGPETMETRIFGRLTAWQNWIFNRPNAVGEKGALKVYGKGSKAQFDVSRV
Sequences:
>Translated_556_residues MSTAETAVAPVDYRTDPSQYKHWKLSFNGPVATLGIDIAEDGGIRDGYKLKLNSYDLGVDIELHDAIQRIRFEHPEVRTV VLTSLKDRVFCSGANIFMLGLSTHAWKVNFCKFTNETRNGLEDSSRHSGLKFLAAVNGACAGGGYELALACDEIYLVDDR SSSVSLPEVPLLGVLPGTGGLTRVTDKRKVRHDRADIFCTVVEGVRGERAKAWRLVDEVVKPNQFDQAIQARALELAAQS DRPAHAQGVPLTRIERTDREDGLTYKTLDVTIDRAKRIATFTAKAPQTEPPASIDAIVAAGANWWPLKFAREFDDAILSM RTNELAVGTWVFRTEGDARHLLAADASLMQHKDHWFVRETIGLLRRTLARIDVSSRSLFALIEPGSCFAGTFAELAFAAD RTYMAALPANEDEEPAITLSEVNFGLYPMVTHQSRLARRFYEETEPLDAVRSRIGQAIKPVEAERLGLVTASPDDIDWAD EIRIALEERAAMSPDALTGLEANLRFNGPETMETRIFGRLTAWQNWIFNRPNAVGEKGALKVYGKGSKAQFDVSRV >Mature_555_residues STAETAVAPVDYRTDPSQYKHWKLSFNGPVATLGIDIAEDGGIRDGYKLKLNSYDLGVDIELHDAIQRIRFEHPEVRTVV LTSLKDRVFCSGANIFMLGLSTHAWKVNFCKFTNETRNGLEDSSRHSGLKFLAAVNGACAGGGYELALACDEIYLVDDRS SSVSLPEVPLLGVLPGTGGLTRVTDKRKVRHDRADIFCTVVEGVRGERAKAWRLVDEVVKPNQFDQAIQARALELAAQSD RPAHAQGVPLTRIERTDREDGLTYKTLDVTIDRAKRIATFTAKAPQTEPPASIDAIVAAGANWWPLKFAREFDDAILSMR TNELAVGTWVFRTEGDARHLLAADASLMQHKDHWFVRETIGLLRRTLARIDVSSRSLFALIEPGSCFAGTFAELAFAADR TYMAALPANEDEEPAITLSEVNFGLYPMVTHQSRLARRFYEETEPLDAVRSRIGQAIKPVEAERLGLVTASPDDIDWADE IRIALEERAAMSPDALTGLEANLRFNGPETMETRIFGRLTAWQNWIFNRPNAVGEKGALKVYGKGSKAQFDVSRV
Specific function: Catalyzes the ring opening of 2,3-dihydro-2,3- dihydroxybenzoyl-CoA to form 3,4-dehydroadipyl-CoA semialdehyde [H]
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the benzoyl-CoA oxygenase component C family [H]
Homologues:
Organism=Homo sapiens, GI20127408, Length=164, Percent_Identity=34.1463414634146, Blast_Score=76, Evalue=8e-14, Organism=Escherichia coli, GI1788682, Length=200, Percent_Identity=33.5, Blast_Score=77, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17558304, Length=165, Percent_Identity=30.9090909090909, Blast_Score=69, Evalue=8e-12, Organism=Caenorhabditis elegans, GI25144276, Length=173, Percent_Identity=29.4797687861272, Blast_Score=67, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17508951, Length=173, Percent_Identity=29.4797687861272, Blast_Score=67, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17508953, Length=173, Percent_Identity=29.4797687861272, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI24653139, Length=242, Percent_Identity=30.5785123966942, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017633 - InterPro: IPR001753 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.1.2.44 [H]
Molecular weight: Translated: 61580; Mature: 61449
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAETAVAPVDYRTDPSQYKHWKLSFNGPVATLGIDIAEDGGIRDGYKLKLNSYDLGVD CCCCCCEECCCCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCCCCEEEEEECCCCEEE IELHDAIQRIRFEHPEVRTVVLTSLKDRVFCSGANIFMLGLSTHAWKVNFCKFTNETRNG EEHHHHHHHHHCCCCCEEEEEEEHHCCEEEECCCCEEEEEECCCEEEEEEEEECCHHHCC LEDSSRHSGLKFLAAVNGACAGGGYELALACDEIYLVDDRSSSVSLPEVPLLGVLPGTGG CCCCHHHCCEEEEEECCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCEEEEECCCCC LTRVTDKRKVRHDRADIFCTVVEGVRGERAKAWRLVDEVVKPNQFDQAIQARALELAAQS CCCCCHHHHHHHCHHHEEEEEHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC DRPAHAQGVPLTRIERTDREDGLTYKTLDVTIDRAKRIATFTAKAPQTEPPASIDAIVAA CCCCCCCCCCCHHHCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCHHHHEEC GANWWPLKFAREFDDAILSMRTNELAVGTWVFRTEGDARHLLAADASLMQHKDHWFVRET CCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHH IGLLRRTLARIDVSSRSLFALIEPGSCFAGTFAELAFAADRTYMAALPANEDEEPAITLS HHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEE EVNFGLYPMVTHQSRLARRFYEETEPLDAVRSRIGQAIKPVEAERLGLVTASPDDIDWAD ECCCCCEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCCHH EIRIALEERAAMSPDALTGLEANLRFNGPETMETRIFGRLTAWQNWIFNRPNAVGEKGAL HHHHHHHHHCCCCCCHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCE KVYGKGSKAQFDVSRV EEEECCCCCEEECCCC >Mature Secondary Structure STAETAVAPVDYRTDPSQYKHWKLSFNGPVATLGIDIAEDGGIRDGYKLKLNSYDLGVD CCCCCEECCCCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCCCCEEEEEECCCCEEE IELHDAIQRIRFEHPEVRTVVLTSLKDRVFCSGANIFMLGLSTHAWKVNFCKFTNETRNG EEHHHHHHHHHCCCCCEEEEEEEHHCCEEEECCCCEEEEEECCCEEEEEEEEECCHHHCC LEDSSRHSGLKFLAAVNGACAGGGYELALACDEIYLVDDRSSSVSLPEVPLLGVLPGTGG CCCCHHHCCEEEEEECCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCEEEEECCCCC LTRVTDKRKVRHDRADIFCTVVEGVRGERAKAWRLVDEVVKPNQFDQAIQARALELAAQS CCCCCHHHHHHHCHHHEEEEEHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC DRPAHAQGVPLTRIERTDREDGLTYKTLDVTIDRAKRIATFTAKAPQTEPPASIDAIVAA CCCCCCCCCCCHHHCCCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCHHHHEEC GANWWPLKFAREFDDAILSMRTNELAVGTWVFRTEGDARHLLAADASLMQHKDHWFVRET CCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHH IGLLRRTLARIDVSSRSLFALIEPGSCFAGTFAELAFAADRTYMAALPANEDEEPAITLS HHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEE EVNFGLYPMVTHQSRLARRFYEETEPLDAVRSRIGQAIKPVEAERLGLVTASPDDIDWAD ECCCCCEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCCHH EIRIALEERAAMSPDALTGLEANLRFNGPETMETRIFGRLTAWQNWIFNRPNAVGEKGAL HHHHHHHHHCCCCCCHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCE KVYGKGSKAQFDVSRV EEEECCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12399500 [H]