| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is aroK [H]
Identifier: 91784379
GI number: 91784379
Start: 3348346
End: 3349329
Strand: Reverse
Name: aroK [H]
Synonym: Bxe_A1421
Alternate gene names: 91784379
Gene position: 3349329-3348346 (Counterclockwise)
Preceding gene: 91784386
Following gene: 91784378
Centisome position: 68.41
GC content: 67.38
Gene sequence:
>984_bases ATGAACCAAAATTACTCTCCTGCGTCATTGGACGATTCCGCCGACGAGGATGCCGGCCGCGCGGAACGGGCCACGGAGCG CGGCGGCGAACGCGAGGAACGCGATCCCTTCCTGACGGCGATGGGCGAACGCGTGCGCCTGCTGCGTGCGCGCCGCGGCA TGACCCGCAAGACGCTCGCCACGGAAACCGGGTTGTCGGAGCGGCATCTTGCGAATCTGGAGTCGGGCGTGGGCAATGCG TCCGTGCTGGTGCTGCGGCAGATTGCGGCCACTTTGAACTGTTCGCTCGCCGAGGTGATCGGCGACGAAACCACCGCTTC CGCCGAATGGCTGCTGATCCGTGAACTGCTGCACGGACGCGATCAGGCGGCGTTGCAGCGCGCCCGCATGGCGCTTGCCG AAATGTTCGCGCAGGCGCCGCGCGACCCGCATCGCAAGGACCGGATTGCGTTGATCGGCCTGCGCGGCGCCGGCAAATCC ACGCTCGGGCGCATGCTGGCACAGGAGCGCAAGGTGCCGTTCGTCGAGCTCACGCGCGTGATCGAGCAACTGGCCGGCTG CCCGCCGTCGGAGATCCACTCGCTGTACGGGGCGGCCGCTTACCGGCGTTATGAACACCGGGCGCTCGAGGCCGTGATTC AGGAGCACGAGCATGCGGTGATTGCGTCGCCGGGCGGCCTCGTGTCCGAGTCGGGCACGTTCAATACGCTGCTGTCGCAC TGCTACACGGTGTGGCTGCAAGCAGCGCCGGAGGAACATATGCGCCGCGTCGTCGCGCAGGGCGACCTGCGGCCGATGTC GGGCAACAAGGAGGCGATGGACGACCTGAAGCGCATCCTGGCGGGACGCAGCGAGCTGTATGGCCGCGCCGACATGAGCT TCGACACCAGCGAGAAAACCCTGGCCGACGCCTATCTGCAACTGCGCGACCGTCTCGCCGCAAGGCTGGCCGCCGAATCG CCGGATGAAGCGCGTGTGGGCTGA
Upstream 100 bases:
>100_bases CAGCGTTTGTTATTGGATCAATATTTGGCGAAAATTAACCGTTCACCACGTGTGTGTCAAGCACTATAGTACATATATCG CAGTTAAAGGGCGCCAAAAC
Downstream 100 bases:
>100_bases CATGCATTCCTGCATCAGGGTTTACTAGCAAACATGCACTAAAGTGCTTTACATGGGTTGAACGATGCACTATTGTTCAA AAAACAATTTGCATCGTCCA
Product: anaerobic benzoate catabolism transcriptional regulator
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MNQNYSPASLDDSADEDAGRAERATERGGEREERDPFLTAMGERVRLLRARRGMTRKTLATETGLSERHLANLESGVGNA SVLVLRQIAATLNCSLAEVIGDETTASAEWLLIRELLHGRDQAALQRARMALAEMFAQAPRDPHRKDRIALIGLRGAGKS TLGRMLAQERKVPFVELTRVIEQLAGCPPSEIHSLYGAAAYRRYEHRALEAVIQEHEHAVIASPGGLVSESGTFNTLLSH CYTVWLQAAPEEHMRRVVAQGDLRPMSGNKEAMDDLKRILAGRSELYGRADMSFDTSEKTLADAYLQLRDRLAARLAAES PDEARVG
Sequences:
>Translated_327_residues MNQNYSPASLDDSADEDAGRAERATERGGEREERDPFLTAMGERVRLLRARRGMTRKTLATETGLSERHLANLESGVGNA SVLVLRQIAATLNCSLAEVIGDETTASAEWLLIRELLHGRDQAALQRARMALAEMFAQAPRDPHRKDRIALIGLRGAGKS TLGRMLAQERKVPFVELTRVIEQLAGCPPSEIHSLYGAAAYRRYEHRALEAVIQEHEHAVIASPGGLVSESGTFNTLLSH CYTVWLQAAPEEHMRRVVAQGDLRPMSGNKEAMDDLKRILAGRSELYGRADMSFDTSEKTLADAYLQLRDRLAARLAAES PDEARVG >Mature_327_residues MNQNYSPASLDDSADEDAGRAERATERGGEREERDPFLTAMGERVRLLRARRGMTRKTLATETGLSERHLANLESGVGNA SVLVLRQIAATLNCSLAEVIGDETTASAEWLLIRELLHGRDQAALQRARMALAEMFAQAPRDPHRKDRIALIGLRGAGKS TLGRMLAQERKVPFVELTRVIEQLAGCPPSEIHSLYGAAAYRRYEHRALEAVIQEHEHAVIASPGGLVSESGTFNTLLSH CYTVWLQAAPEEHMRRVVAQGDLRPMSGNKEAMDDLKRILAGRSELYGRADMSFDTSEKTLADAYLQLRDRLAARLAAES PDEARVG
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
None
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 36066; Mature: 36066
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQNYSPASLDDSADEDAGRAERATERGGEREERDPFLTAMGERVRLLRARRGMTRKTLA CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHCCCHHHHHH TETGLSERHLANLESGVGNASVLVLRQIAATLNCSLAEVIGDETTASAEWLLIRELLHGR HHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHCCC DQAALQRARMALAEMFAQAPRDPHRKDRIALIGLRGAGKSTLGRMLAQERKVPFVELTRV CHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHH IEQLAGCPPSEIHSLYGAAAYRRYEHRALEAVIQEHEHAVIASPGGLVSESGTFNTLLSH HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHH CYTVWLQAAPEEHMRRVVAQGDLRPMSGNKEAMDDLKRILAGRSELYGRADMSFDTSEKT HHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHH LADAYLQLRDRLAARLAAESPDEARVG HHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNQNYSPASLDDSADEDAGRAERATERGGEREERDPFLTAMGERVRLLRARRGMTRKTLA CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHCCCHHHHHH TETGLSERHLANLESGVGNASVLVLRQIAATLNCSLAEVIGDETTASAEWLLIRELLHGR HHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHCCC DQAALQRARMALAEMFAQAPRDPHRKDRIALIGLRGAGKSTLGRMLAQERKVPFVELTRV CHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHH IEQLAGCPPSEIHSLYGAAAYRRYEHRALEAVIQEHEHAVIASPGGLVSESGTFNTLLSH HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHH CYTVWLQAAPEEHMRRVVAQGDLRPMSGNKEAMDDLKRILAGRSELYGRADMSFDTSEKT HHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHH LADAYLQLRDRLAARLAAESPDEARVG HHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12917641 [H]