| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is pucI [H]
Identifier: 91784370
GI number: 91784370
Start: 3336476
End: 3337987
Strand: Reverse
Name: pucI [H]
Synonym: Bxe_A1430
Alternate gene names: 91784370
Gene position: 3337987-3336476 (Counterclockwise)
Preceding gene: 91784371
Following gene: 91784369
Centisome position: 68.18
GC content: 61.64
Gene sequence:
>1512_bases ATGAAGCAGACAGCGCAACCCGCCGAGCCGCAGTTCGCAACCGGCGTGCAGGGCAGCAGTCTTTACAACGACGACCTGGC GCCGACCGGTATCGCGCAGCGCACATGGAAGTGGTATCACTTCGCGGCGCTCTGGGTAGGGATGGTGATGAACATCGCGT CCTACATGCTCGCCGCTGGTTTGACGGAAGAGGGCATGTCGCCGTGGCAAGCGGTGATGACCGTGCTGCTCGGCAACCTG ATCGTGCTGGTGCCGATGCTGCTGATCGGCCATGCGGGCGCGAAGCACGGCATTCCGTACGCGGTGCTGGTGCGCTCCTC GTTCGGCACGCAGGGCGCCAAACTGCCGGCGATGCTGCGCGCGATCGTCGCCTGTGGCTGGTACGGGATTCAGACGTGGC TCGGCGGCAGCGCGATCTATACGCTGCTGAACATTCTCACCGGCAACGCGCTGCACGGCGCGGCTTTGCCGTTCCTCGAC ATCTCGCTTGCGCAACTGGCCTGTTTCCTCGTGTTCTGGGCGCTGCAGATCTACTTCATCGTGCATGGCACCGATTCGAT CCGCTGGCTCGAAAGCTGGTCCGCGCCGATCAAGATCGTGATGTGCATTGCGCTCGTATGGTGGGCGACATCCAAAGCGG GCGGTCTGGGCTCGATGCTGTCGGCGCCGTCGCAATTCGTGCCGGGCGGCAAGAAAGAGGGCATGTTCTGGATTACCTTC TGGCCCGGCCTTACCGCAATGGTCGGATTCTGGGCCACCCTCGCATTGAATATTCCCGACTTCACGCGTTTTGCCAGAAC CCAGCGTGATCAGATCATCGGCCAGTCAGTCGGCTTGCCGGTGCCGATGGCGTTGCTCTCGGTGATCTCGGTGGTGGTCA CGTCGGCCACCGTGGTGATTTACGGCAAGGCGATCTGGGATCCGATCGACCTGACGAGCCGCATGACCGGCATCGGCGTG GGCGTCGCGCTGATCATCCTCACACTCGACACCATGTGCTGCAATCTCGCGGCAAATCTCGTCGGCCCGGCCTATGATTT TTCGAGCCTGTGGCCCAAAGGTATTTCGTATCGCGTGGGCGGCATGATCACCGCGACCATCGCAATCGTGATGATGCCGT GGAAGATTCTCGCCACCACGCAAGGCTATATCTTTACGTGGCTGGTCGGCTATTCGGCCTTGCTCGGGCCGGTGGCCGGT ATTCTGATGGTCGACTATTTCCTGATTCGCGGCACGCGCCTCGATACGCGTGAACTGTTCGACGAACACGGCGAGTACAG CTATACCGGCGGCTGGAATATCGGCGCGGTGGTCGCGCTCGTGATCGGCGTGCTGCCGAATCTGCCGGGCTTTTTGCACA CGGCGTTTCCGGCGTCGTTCCCGAACGTGCCGGCGATCTTCAATACGCTCTATACGTATGCGTGGTTTGTCGGATTGGCG TTGGCGTCGATCGTATACAGCGCGTGGATGAAGCTGAGCAAGGGACCCAGCGCGCGCGTGGCGAGTGCATGA
Upstream 100 bases:
>100_bases TTGGCAGCAAACGCAGCGCTAGTACTGAACCTGTCATTCCCCAAGGCCCGACGCGCCGTGAGAGCCGCGCGGGCCGCAAC GATCGAGTGGAGATCCCTAG
Downstream 100 bases:
>100_bases GCAGGAACGAAGTACGTAGTACCGAAACCAGCAGTTCATAAGGAGGCGGCAACATGACGACCCTGATTCGCGGCGGCACG ATTATCGACGCGGAGAACAC
Product: NCS1 family nucleobase/cation symporter
Products: NA
Alternate protein names: Allantoin transport protein [H]
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MKQTAQPAEPQFATGVQGSSLYNDDLAPTGIAQRTWKWYHFAALWVGMVMNIASYMLAAGLTEEGMSPWQAVMTVLLGNL IVLVPMLLIGHAGAKHGIPYAVLVRSSFGTQGAKLPAMLRAIVACGWYGIQTWLGGSAIYTLLNILTGNALHGAALPFLD ISLAQLACFLVFWALQIYFIVHGTDSIRWLESWSAPIKIVMCIALVWWATSKAGGLGSMLSAPSQFVPGGKKEGMFWITF WPGLTAMVGFWATLALNIPDFTRFARTQRDQIIGQSVGLPVPMALLSVISVVVTSATVVIYGKAIWDPIDLTSRMTGIGV GVALIILTLDTMCCNLAANLVGPAYDFSSLWPKGISYRVGGMITATIAIVMMPWKILATTQGYIFTWLVGYSALLGPVAG ILMVDYFLIRGTRLDTRELFDEHGEYSYTGGWNIGAVVALVIGVLPNLPGFLHTAFPASFPNVPAIFNTLYTYAWFVGLA LASIVYSAWMKLSKGPSARVASA
Sequences:
>Translated_503_residues MKQTAQPAEPQFATGVQGSSLYNDDLAPTGIAQRTWKWYHFAALWVGMVMNIASYMLAAGLTEEGMSPWQAVMTVLLGNL IVLVPMLLIGHAGAKHGIPYAVLVRSSFGTQGAKLPAMLRAIVACGWYGIQTWLGGSAIYTLLNILTGNALHGAALPFLD ISLAQLACFLVFWALQIYFIVHGTDSIRWLESWSAPIKIVMCIALVWWATSKAGGLGSMLSAPSQFVPGGKKEGMFWITF WPGLTAMVGFWATLALNIPDFTRFARTQRDQIIGQSVGLPVPMALLSVISVVVTSATVVIYGKAIWDPIDLTSRMTGIGV GVALIILTLDTMCCNLAANLVGPAYDFSSLWPKGISYRVGGMITATIAIVMMPWKILATTQGYIFTWLVGYSALLGPVAG ILMVDYFLIRGTRLDTRELFDEHGEYSYTGGWNIGAVVALVIGVLPNLPGFLHTAFPASFPNVPAIFNTLYTYAWFVGLA LASIVYSAWMKLSKGPSARVASA >Mature_503_residues MKQTAQPAEPQFATGVQGSSLYNDDLAPTGIAQRTWKWYHFAALWVGMVMNIASYMLAAGLTEEGMSPWQAVMTVLLGNL IVLVPMLLIGHAGAKHGIPYAVLVRSSFGTQGAKLPAMLRAIVACGWYGIQTWLGGSAIYTLLNILTGNALHGAALPFLD ISLAQLACFLVFWALQIYFIVHGTDSIRWLESWSAPIKIVMCIALVWWATSKAGGLGSMLSAPSQFVPGGKKEGMFWITF WPGLTAMVGFWATLALNIPDFTRFARTQRDQIIGQSVGLPVPMALLSVISVVVTSATVVIYGKAIWDPIDLTSRMTGIGV GVALIILTLDTMCCNLAANLVGPAYDFSSLWPKGISYRVGGMITATIAIVMMPWKILATTQGYIFTWLVGYSALLGPVAG ILMVDYFLIRGTRLDTRELFDEHGEYSYTGGWNIGAVVALVIGVLPNLPGFLHTAFPASFPNVPAIFNTLYTYAWFVGLA LASIVYSAWMKLSKGPSARVASA
Specific function: Transport of allantoin [H]
COG id: COG1953
COG function: function code FH; Cytosine/uracil/thiamine/allantoin permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
Organism=Escherichia coli, GI87081749, Length=485, Percent_Identity=28.4536082474227, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6322219, Length=456, Percent_Identity=28.5087719298246, Blast_Score=195, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6319429, Length=504, Percent_Identity=27.7777777777778, Blast_Score=193, Evalue=7e-50, Organism=Saccharomyces cerevisiae, GI6319495, Length=493, Percent_Identity=26.369168356998, Blast_Score=181, Evalue=3e-46, Organism=Saccharomyces cerevisiae, GI6324645, Length=447, Percent_Identity=24.3847874720358, Blast_Score=140, Evalue=5e-34, Organism=Saccharomyces cerevisiae, GI6324766, Length=452, Percent_Identity=22.787610619469, Blast_Score=125, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6323266, Length=444, Percent_Identity=22.972972972973, Blast_Score=125, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 - InterPro: IPR012681 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 54300; Mature: 54300
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQTAQPAEPQFATGVQGSSLYNDDLAPTGIAQRTWKWYHFAALWVGMVMNIASYMLAAG CCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LTEEGMSPWQAVMTVLLGNLIVLVPMLLIGHAGAKHGIPYAVLVRSSFGTQGAKLPAMLR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHH AIVACGWYGIQTWLGGSAIYTLLNILTGNALHGAALPFLDISLAQLACFLVFWALQIYFI HHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHE VHGTDSIRWLESWSAPIKIVMCIALVWWATSKAGGLGSMLSAPSQFVPGGKKEGMFWITF EECCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHCCCCCCCCEEEEEE WPGLTAMVGFWATLALNIPDFTRFARTQRDQIIGQSVGLPVPMALLSVISVVVTSATVVI CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEE YGKAIWDPIDLTSRMTGIGVGVALIILTLDTMCCNLAANLVGPAYDFSSLWPKGISYRVG EEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHC GMITATIAIVMMPWKILATTQGYIFTWLVGYSALLGPVAGILMVDYFLIRGTRLDTRELF HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH DEHGEYSYTGGWNIGAVVALVIGVLPNLPGFLHTAFPASFPNVPAIFNTLYTYAWFVGLA HHCCCEEECCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LASIVYSAWMKLSKGPSARVASA HHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKQTAQPAEPQFATGVQGSSLYNDDLAPTGIAQRTWKWYHFAALWVGMVMNIASYMLAAG CCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LTEEGMSPWQAVMTVLLGNLIVLVPMLLIGHAGAKHGIPYAVLVRSSFGTQGAKLPAMLR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHH AIVACGWYGIQTWLGGSAIYTLLNILTGNALHGAALPFLDISLAQLACFLVFWALQIYFI HHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHE VHGTDSIRWLESWSAPIKIVMCIALVWWATSKAGGLGSMLSAPSQFVPGGKKEGMFWITF EECCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHCCCCCCCCEEEEEE WPGLTAMVGFWATLALNIPDFTRFARTQRDQIIGQSVGLPVPMALLSVISVVVTSATVVI CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEE YGKAIWDPIDLTSRMTGIGVGVALIILTLDTMCCNLAANLVGPAYDFSSLWPKGISYRVG EEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHC GMITATIAIVMMPWKILATTQGYIFTWLVGYSALLGPVAGILMVDYFLIRGTRLDTRELF HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH DEHGEYSYTGGWNIGAVVALVIGVLPNLPGFLHTAFPASFPNVPAIFNTLYTYAWFVGLA HHCCCEEECCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LASIVYSAWMKLSKGPSARVASA HHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377; 11344136 [H]