| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91784284
Identifier: 91784284
GI number: 91784284
Start: 3240386
End: 3241405
Strand: Reverse
Name: 91784284
Synonym: Bxe_A1516
Alternate gene names: NA
Gene position: 3241405-3240386 (Counterclockwise)
Preceding gene: 91784285
Following gene: 91784283
Centisome position: 66.21
GC content: 61.27
Gene sequence:
>1020_bases ATGCGCAAATTTTTTCTTCCCGGCTTGACTGCCACGTTCGCCGCGGGTGCGGCGCTGGTTGCCGCCGCAGGTTTTTTTTC TCCGGCCGCCCACGCCAACAACGTGATCGTGCTCAATTCCGGCGAAGCCACGCTGAGCCTGATCGACGAGACCACCCGTC AGGTGGTCGGCACGGTGCCCACGGGCAAGGAACCGCACCATCTGATGGCCACGCCGGACAATTCGTCGTTGATCGTGGCG AATTCGGTGTCGAACAATCTGATGTTCGTCGATCCGAAAACCGGCCAGGTGCAGCGCTGGGTCGAAAATATCGAAGATCC GTATCAGATCGGTTTTTCGCCTGACCGCAAATGGCTGGTCACCACCGGCCTGCGTCTGGACCGTCTCGACATCTATCACT ACGACGGCCAGAAGAACCAGATGACGCTGGCGTCGCGCCTGCCGCTCGCGGTCATGCCGAGCCACATGGCGTTCACCACC GACAGCAAGACGGTTTTCGTCACGTTGCAGGTGTCGGGCGAACTGGCGGCGATCGATCTCGCCACGCAGACCGTCAAGTG GAAGATGAAAGTCGGCAAGGTGCCGGCAGGCCTGTGGATGACGCCGGGCGACAAATACCTGCTGGTCGGCATGACGGGCG CGGATTACGTCGCGGTGGTCGACTGGCGCAACCAGAAGGTCATCAAGACGATCCACACGGGCAACGGCGCGCATAACTTC CGCTCGCTGGCTGACGGCAAGCATGTCGCGGTGTCGAACCGGGTGGCGAGCACCATCAGCATCATCGACGAAGACGCGCT TACCAACGTCGGCGACATCACGGGTTTGATGCCCGGACCCGACGACATGGAACTTTCCGCGGACAAACGCTATCTGTGGG TTACCTTCCGCTTCGCGAAGCATGTCGGCATCATCGACCTGACAACGCGTAAGCTGATCCAGACGATTGCCGTGGGCCGC TCGCCGCACGGCATCTATTTCTTCAATCGCGCGCCGGTCACGGCGCCGAACGGCGCCTGA
Upstream 100 bases:
>100_bases TGGTGCCCCTGATTTCTCTTGTGTGCGAACAGCGACCTACGTCAACCGCTGGCCCCGGCAAACGTTCTACAATGACAGCT GTTCTCCGAAGTGAGTTTTC
Downstream 100 bases:
>100_bases GGCAGGGACTCATGCCGCACCAGGCGAACCGTCACGGATGAAGTAACAGACCAGCACCATGTTCCATCTGATCTTTTCCT CCCTCGACAGCTTTGTCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: 40-Residue YVTN Family Beta-Propeller Repeat Protein; Surface Antigen Gene; Cell Surface Protein; Surface Layer Protein; YVTN Family Beta-Propeller Repeat Protein; Beta-Propeller Repeat-Containing Protein; Beta-Propeller Fold Protein; Surface Antigen; Cytochrome D1 Heme Region; Triple Helix Repeat-Containing Collagen; Signal Peptide Protein; Yvtn Beta-Propeller Repeat Family Protein; WD40 Domain-Containing Protein; Outer Membrane Protein; YVTN Beta-Propeller Repeat Family Protein; PGRS-Subfamily Gly-Rich Protein; IPT/TIG Domain Protein; Yvtn Beta-Propeller Repeat-Containing Protein; Vegetative Incompatibility; Signal Peptide; Beta-Propeller Repeat Protein YVTN Family; Surface Antigen-Like Protein; Cytochrome D1 Heme Subunit; Serine/Threonine Protein Kinase; YVTN Family Beta-Propeller Repeat-Containing Protein; 40-Residue Yvtn Family Beta-Propeller Repeat Protein; Exported Protein; YVTN Family Beta-Propeller Repeat Family Protein
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MRKFFLPGLTATFAAGAALVAAAGFFSPAAHANNVIVLNSGEATLSLIDETTRQVVGTVPTGKEPHHLMATPDNSSLIVA NSVSNNLMFVDPKTGQVQRWVENIEDPYQIGFSPDRKWLVTTGLRLDRLDIYHYDGQKNQMTLASRLPLAVMPSHMAFTT DSKTVFVTLQVSGELAAIDLATQTVKWKMKVGKVPAGLWMTPGDKYLLVGMTGADYVAVVDWRNQKVIKTIHTGNGAHNF RSLADGKHVAVSNRVASTISIIDEDALTNVGDITGLMPGPDDMELSADKRYLWVTFRFAKHVGIIDLTTRKLIQTIAVGR SPHGIYFFNRAPVTAPNGA
Sequences:
>Translated_339_residues MRKFFLPGLTATFAAGAALVAAAGFFSPAAHANNVIVLNSGEATLSLIDETTRQVVGTVPTGKEPHHLMATPDNSSLIVA NSVSNNLMFVDPKTGQVQRWVENIEDPYQIGFSPDRKWLVTTGLRLDRLDIYHYDGQKNQMTLASRLPLAVMPSHMAFTT DSKTVFVTLQVSGELAAIDLATQTVKWKMKVGKVPAGLWMTPGDKYLLVGMTGADYVAVVDWRNQKVIKTIHTGNGAHNF RSLADGKHVAVSNRVASTISIIDEDALTNVGDITGLMPGPDDMELSADKRYLWVTFRFAKHVGIIDLTTRKLIQTIAVGR SPHGIYFFNRAPVTAPNGA >Mature_339_residues MRKFFLPGLTATFAAGAALVAAAGFFSPAAHANNVIVLNSGEATLSLIDETTRQVVGTVPTGKEPHHLMATPDNSSLIVA NSVSNNLMFVDPKTGQVQRWVENIEDPYQIGFSPDRKWLVTTGLRLDRLDIYHYDGQKNQMTLASRLPLAVMPSHMAFTT DSKTVFVTLQVSGELAAIDLATQTVKWKMKVGKVPAGLWMTPGDKYLLVGMTGADYVAVVDWRNQKVIKTIHTGNGAHNF RSLADGKHVAVSNRVASTISIIDEDALTNVGDITGLMPGPDDMELSADKRYLWVTFRFAKHVGIIDLTTRKLIQTIAVGR SPHGIYFFNRAPVTAPNGA
Specific function: Unknown
COG id: COG3391
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36874; Mature: 36874
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKFFLPGLTATFAAGAALVAAAGFFSPAAHANNVIVLNSGEATLSLIDETTRQVVGTVP CCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEHHHHHHHHHEECCC TGKEPHHLMATPDNSSLIVANSVSNNLMFVDPKTGQVQRWVENIEDPYQIGFSPDRKWLV CCCCCCEEEECCCCCCEEEEECCCCCEEEEECCCCHHHHHHHCCCCCEEECCCCCCCEEE TTGLRLDRLDIYHYDGQKNQMTLASRLPLAVMPSHMAFTTDSKTVFVTLQVSGELAAIDL EECCEEEEEEEEEECCCCCCEEHHHCCCEEECCCCEEEEECCCEEEEEEEECCCEEEEEE ATQTVKWKMKVGKVPAGLWMTPGDKYLLVGMTGADYVAVVDWRNQKVIKTIHTGNGAHNF EEEEEEEEEEECCCCCCCEECCCCCEEEEEECCCCEEEEEEECCCEEEEEEECCCCCHHH RSLADGKHVAVSNRVASTISIIDEDALTNVGDITGLMPGPDDMELSADKRYLWVTFRFAK HHHCCCCEEEECCHHHHHHEEECHHHHCCCCHHCCCCCCCCCCEECCCCEEEEEEEEEHH HVGIIDLTTRKLIQTIAVGRSPHGIYFFNRAPVTAPNGA CCCEEEEHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCC >Mature Secondary Structure MRKFFLPGLTATFAAGAALVAAAGFFSPAAHANNVIVLNSGEATLSLIDETTRQVVGTVP CCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEHHHHHHHHHEECCC TGKEPHHLMATPDNSSLIVANSVSNNLMFVDPKTGQVQRWVENIEDPYQIGFSPDRKWLV CCCCCCEEEECCCCCCEEEEECCCCCEEEEECCCCHHHHHHHCCCCCEEECCCCCCCEEE TTGLRLDRLDIYHYDGQKNQMTLASRLPLAVMPSHMAFTTDSKTVFVTLQVSGELAAIDL EECCEEEEEEEEEECCCCCCEEHHHCCCEEECCCCEEEEECCCEEEEEEEECCCEEEEEE ATQTVKWKMKVGKVPAGLWMTPGDKYLLVGMTGADYVAVVDWRNQKVIKTIHTGNGAHNF EEEEEEEEEEECCCCCCCEECCCCCEEEEEECCCCEEEEEEECCCEEEEEEECCCCCHHH RSLADGKHVAVSNRVASTISIIDEDALTNVGDITGLMPGPDDMELSADKRYLWVTFRFAK HHHCCCCEEEECCHHHHHHEEECHHHHCCCCHHCCCCCCCCCCEECCCCEEEEEEEEEHH HVGIIDLTTRKLIQTIAVGRSPHGIYFFNRAPVTAPNGA CCCEEEEHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA