| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91784283
Identifier: 91784283
GI number: 91784283
Start: 3239329
End: 3240327
Strand: Reverse
Name: 91784283
Synonym: Bxe_A1517
Alternate gene names: NA
Gene position: 3240327-3239329 (Counterclockwise)
Preceding gene: 91784284
Following gene: 91784282
Centisome position: 66.19
GC content: 60.96
Gene sequence:
>999_bases ATGTTCCATCTGATCTTTTCCTCCCTCGACAGCTTTGTCTCAGCCGTGCAGACGCTGCTGTACGTCGACGTGGTGCAGCC GCTGCTGTTCCGCTTCAATCTGATGGACTACGACGAAGACACTTACGACAGCCTGTACTGGGTGATCGTGGGCGTCTTCG AAGTGCTGGCCATGTACGCGATCCTGCGCCCGCTCGAAGCATTGCGTCCGGTGGAGCAGTGGGAGAACCGCAAGGCGGTG CGCGTCGACGTGATCTACACGTGGATCGCCAAGCTCGGCATTCTCAACCTGTTCTTTTTCTTCGCGCTGCAGCCGTTCTT CGACAACGTGCAGGCGTGGCTGCGGCTGCACAACATTTCGAATATCGAGTTCGACAATCTGTGGCCGGGCGTCACCACAC AGCCGCTCGTCACGTTCGTGATGTATCTGCTCGTGCTCGACTTCGCCGGCTACTGGTATCACCGCTGGGAACACCGGATC GGCGTGTGGTGGGAACTGCACGCGGTGCACCACAGCCAGCAGCAGATGTCGCTGTGGTCCGACGACCGCAACCATCTGCT CGACGATCTGCTACAGGCTTCGTTTTTCGCGGTGATCGCGCTGGTGATCGGCGTGCCGCCGTCGCAGTTCGTCGTGCTGG TGGCGATCACGAATCTCGCGCAAAGCGTGCAGCACGCGAATATCCGCTTGTACTTCGGCTGGCTGGGCGAGCGTCTGCTG GTCAGCCCGACCTTCCATCGCCGCCATCATGCAATCGGTTATGGCCATGAAGGCTTGAAATACGGTTGCAACTTCGGCGT GCTGTTTCCGTGGTGGGACATGCTGTTTCGCAGCGTCTCCTGGAGCCGCGACATGGAGCCGACCGGCATCAGCGATCAAC TCGAAGGCCGCCGCTACGGCGAGGGTTTCTGGGCGCAGCACTGGCTCGCCTTCGTGCGCATTGCCGGGCGCCTGTCGCCG AAGCGCCGCACCGAAAGTAACGACGCCGCCGCCGTTTGA
Upstream 100 bases:
>100_bases TTCTTCAATCGCGCGCCGGTCACGGCGCCGAACGGCGCCTGAGGCAGGGACTCATGCCGCACCAGGCGAACCGTCACGGA TGAAGTAACAGACCAGCACC
Downstream 100 bases:
>100_bases GCGCGCATCCTCCCACGCCGCCGGTTTCCCCGGCGGCGCGTCACGTGGTTTATCCTGTTCACTTTTGCGCACGCCGCGCA GAAAGTCCCCTTGGGGGACG
Product: hypothetical protein
Products: NA
Alternate protein names: Sterol Desaturase; Transmembrane Protein; Sterol Desaturase-Related Protein; Sterol Desaturase Family Protein; Sterol Desaturase-Like Protein; YhhN Family Protein; YhhN-Like Protein; Fatty Acid Hydroxylase Superfamily; TRAP Dicarboxylate Transporter; Sterol Desaturase Protein; TRAP Dicarboxylate Transporter DctM Subunit
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MFHLIFSSLDSFVSAVQTLLYVDVVQPLLFRFNLMDYDEDTYDSLYWVIVGVFEVLAMYAILRPLEALRPVEQWENRKAV RVDVIYTWIAKLGILNLFFFFALQPFFDNVQAWLRLHNISNIEFDNLWPGVTTQPLVTFVMYLLVLDFAGYWYHRWEHRI GVWWELHAVHHSQQQMSLWSDDRNHLLDDLLQASFFAVIALVIGVPPSQFVVLVAITNLAQSVQHANIRLYFGWLGERLL VSPTFHRRHHAIGYGHEGLKYGCNFGVLFPWWDMLFRSVSWSRDMEPTGISDQLEGRRYGEGFWAQHWLAFVRIAGRLSP KRRTESNDAAAV
Sequences:
>Translated_332_residues MFHLIFSSLDSFVSAVQTLLYVDVVQPLLFRFNLMDYDEDTYDSLYWVIVGVFEVLAMYAILRPLEALRPVEQWENRKAV RVDVIYTWIAKLGILNLFFFFALQPFFDNVQAWLRLHNISNIEFDNLWPGVTTQPLVTFVMYLLVLDFAGYWYHRWEHRI GVWWELHAVHHSQQQMSLWSDDRNHLLDDLLQASFFAVIALVIGVPPSQFVVLVAITNLAQSVQHANIRLYFGWLGERLL VSPTFHRRHHAIGYGHEGLKYGCNFGVLFPWWDMLFRSVSWSRDMEPTGISDQLEGRRYGEGFWAQHWLAFVRIAGRLSP KRRTESNDAAAV >Mature_332_residues MFHLIFSSLDSFVSAVQTLLYVDVVQPLLFRFNLMDYDEDTYDSLYWVIVGVFEVLAMYAILRPLEALRPVEQWENRKAV RVDVIYTWIAKLGILNLFFFFALQPFFDNVQAWLRLHNISNIEFDNLWPGVTTQPLVTFVMYLLVLDFAGYWYHRWEHRI GVWWELHAVHHSQQQMSLWSDDRNHLLDDLLQASFFAVIALVIGVPPSQFVVLVAITNLAQSVQHANIRLYFGWLGERLL VSPTFHRRHHAIGYGHEGLKYGCNFGVLFPWWDMLFRSVSWSRDMEPTGISDQLEGRRYGEGFWAQHWLAFVRIAGRLSP KRRTESNDAAAV
Specific function: Unknown
COG id: COG3000
COG function: function code I; Sterol desaturase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38931; Mature: 38931
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHLIFSSLDSFVSAVQTLLYVDVVQPLLFRFNLMDYDEDTYDSLYWVIVGVFEVLAMYA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH ILRPLEALRPVEQWENRKAVRVDVIYTWIAKLGILNLFFFFALQPFFDNVQAWLRLHNIS HHHHHHHHCCHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NIEFDNLWPGVTTQPLVTFVMYLLVLDFAGYWYHRWEHRIGVWWELHAVHHSQQQMSLWS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHC DDRNHLLDDLLQASFFAVIALVIGVPPSQFVVLVAITNLAQSVQHANIRLYFGWLGERLL CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHE VSPTFHRRHHAIGYGHEGLKYGCNFGVLFPWWDMLFRSVSWSRDMEPTGISDQLEGRRYG ECCCHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCC EGFWAQHWLAFVRIAGRLSPKRRTESNDAAAV CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MFHLIFSSLDSFVSAVQTLLYVDVVQPLLFRFNLMDYDEDTYDSLYWVIVGVFEVLAMYA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH ILRPLEALRPVEQWENRKAVRVDVIYTWIAKLGILNLFFFFALQPFFDNVQAWLRLHNIS HHHHHHHHCCHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NIEFDNLWPGVTTQPLVTFVMYLLVLDFAGYWYHRWEHRIGVWWELHAVHHSQQQMSLWS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHC DDRNHLLDDLLQASFFAVIALVIGVPPSQFVVLVAITNLAQSVQHANIRLYFGWLGERLL CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHE VSPTFHRRHHAIGYGHEGLKYGCNFGVLFPWWDMLFRSVSWSRDMEPTGISDQLEGRRYG ECCCHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCC EGFWAQHWLAFVRIAGRLSPKRRTESNDAAAV CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA