| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is ispG [H]
Identifier: 91784207
GI number: 91784207
Start: 3151796
End: 3153100
Strand: Reverse
Name: ispG [H]
Synonym: Bxe_A1594
Alternate gene names: 91784207
Gene position: 3153100-3151796 (Counterclockwise)
Preceding gene: 91784208
Following gene: 91784206
Centisome position: 64.4
GC content: 64.14
Gene sequence:
>1305_bases ATGCATTCCGAAGCTCAATCCCAATCCAGTAGCAAGATCGTTTCCAATGAGCCGGTGTTCGGCGGCCAGGCCGCGCGGCG CAAGTCGCACGCGGTCGACGTCCGTTGGGGCGGTCAGCTCGTCACGATCGGTGGCGACGCGCCTGTGCGTGTCCAGTCCA TGACCAACACGGACACCGCGGACGCGATCGGCACCGCAATCCAGATCAAGGAGCTGGCGCAGGCCGGCTCGGAACTGGTG CGTATCACGGTGAACACGCCGGAAGCGGCTGCGGCCGTGCCGGCCGTGCGCGAGCAGCTCGACCGCATGGGCGTGTCGGT GCCGCTCGTCGGCGACTTCCATTACAACGGCCATTTGCTGTTGCGCGATTACCCCGCCTGTGCGGAGGCGTTGTCCAAGT ACCGGATCAACCCGGGCAACGTGGGCCACGGCGCGAAGCGCGACACGCAGTTTGCGCAGATGGTCGAAGCCGCGGCGAAG TACGACAAACCTGTGCGTATCGGCGTCAACTGGGGCAGTCTCGATCAGGATCTGCTCGCCAAAATGATGGACGAGAACGC CGCGCGTTCCACGCCGTGGGAAGCGCAAAGCGTCATGTATGAAGCGCTCATCCAGTCGGCGATCGGCTCGGCGGAGCGGG CGGTCGAACTCGGTCTGTCGCGCAACCAGATCATTCTGTCGTGCAAGGTTAGCGGCGTGCAGGATCTGATCGCCGTGTAT CGTGAACTCGCGCGCCGTTGCGATTTCGCGCTGCATCTCGGCTTGACCGAGGCCGGCATGGGCTCGAAAGGCATCGTGGC GTCGACGGCGGCGCTGTCCGTGTTGCTGCAGCAGGGCATCGGCGACACGATCCGCATTTCGCTTACGCCGGAACCGGGCG GATCGCGCACCGGCGAGGTGATCGTCGGCCAGGAAATCCTGCAGACCATGGGGCTGCGCTCGTTCACGCCGATGGTGATC GCGTGCCCGGGTTGCGGCCGTACCACCAGCACGCTGTTCCAGGAACTGGCGTCGCAGATCCAGACCTATCTGCGCACGCA GATGCCGGTGTGGCGCGATCAGTATCCTGGCGTCGAGAAGATGCACGTCGCGGTGATGGGTTGCATCGTCAACGGTCCGG GCGAGTCGAAGCAGGCCAACATCGGCATTAGCTTGCCGGGTTCGGGTGAGAATCCTGCCGCGCCGGTGTTCATCGACGGC GAGAAGGTGAAGACGCTGCGCGGCGAAAACATCGCCCAAGAATTCCAGCAAATCGTGAGTGACTACGTCGAGCGCCGCTA CGGCCGCGCCGAAGCGCTCAATTAA
Upstream 100 bases:
>100_bases GACAGATACGGTATGCGCCGCGGCCAACCGGTCCGCGGCGCTTTTTCAATTCAGGCGCTACGTCTGTTGTGTGGCGCATG TGGCGTAAATGGGTTTTTCG
Downstream 100 bases:
>100_bases ATATCGGCTACCGAAAGACAGATGACTGAACAGAAGAAAAAGCTCGAAAAGCTGTCCGGCGTGAAGGGCATGAACGACAT CCTTCCGCAGGAAGCCGGGC
Product: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Products: NA
Alternate protein names: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [H]
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MHSEAQSQSSSKIVSNEPVFGGQAARRKSHAVDVRWGGQLVTIGGDAPVRVQSMTNTDTADAIGTAIQIKELAQAGSELV RITVNTPEAAAAVPAVREQLDRMGVSVPLVGDFHYNGHLLLRDYPACAEALSKYRINPGNVGHGAKRDTQFAQMVEAAAK YDKPVRIGVNWGSLDQDLLAKMMDENAARSTPWEAQSVMYEALIQSAIGSAERAVELGLSRNQIILSCKVSGVQDLIAVY RELARRCDFALHLGLTEAGMGSKGIVASTAALSVLLQQGIGDTIRISLTPEPGGSRTGEVIVGQEILQTMGLRSFTPMVI ACPGCGRTTSTLFQELASQIQTYLRTQMPVWRDQYPGVEKMHVAVMGCIVNGPGESKQANIGISLPGSGENPAAPVFIDG EKVKTLRGENIAQEFQQIVSDYVERRYGRAEALN
Sequences:
>Translated_434_residues MHSEAQSQSSSKIVSNEPVFGGQAARRKSHAVDVRWGGQLVTIGGDAPVRVQSMTNTDTADAIGTAIQIKELAQAGSELV RITVNTPEAAAAVPAVREQLDRMGVSVPLVGDFHYNGHLLLRDYPACAEALSKYRINPGNVGHGAKRDTQFAQMVEAAAK YDKPVRIGVNWGSLDQDLLAKMMDENAARSTPWEAQSVMYEALIQSAIGSAERAVELGLSRNQIILSCKVSGVQDLIAVY RELARRCDFALHLGLTEAGMGSKGIVASTAALSVLLQQGIGDTIRISLTPEPGGSRTGEVIVGQEILQTMGLRSFTPMVI ACPGCGRTTSTLFQELASQIQTYLRTQMPVWRDQYPGVEKMHVAVMGCIVNGPGESKQANIGISLPGSGENPAAPVFIDG EKVKTLRGENIAQEFQQIVSDYVERRYGRAEALN >Mature_434_residues MHSEAQSQSSSKIVSNEPVFGGQAARRKSHAVDVRWGGQLVTIGGDAPVRVQSMTNTDTADAIGTAIQIKELAQAGSELV RITVNTPEAAAAVPAVREQLDRMGVSVPLVGDFHYNGHLLLRDYPACAEALSKYRINPGNVGHGAKRDTQFAQMVEAAAK YDKPVRIGVNWGSLDQDLLAKMMDENAARSTPWEAQSVMYEALIQSAIGSAERAVELGLSRNQIILSCKVSGVQDLIAVY RELARRCDFALHLGLTEAGMGSKGIVASTAALSVLLQQGIGDTIRISLTPEPGGSRTGEVIVGQEILQTMGLRSFTPMVI ACPGCGRTTSTLFQELASQIQTYLRTQMPVWRDQYPGVEKMHVAVMGCIVNGPGESKQANIGISLPGSGENPAAPVFIDG EKVKTLRGENIAQEFQQIVSDYVERRYGRAEALN
Specific function: Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate [H]
COG id: COG0821
COG function: function code I; Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispG family [H]
Homologues:
Organism=Escherichia coli, GI1788863, Length=391, Percent_Identity=34.2710997442455, Blast_Score=189, Evalue=4e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016425 - InterPro: IPR004588 [H]
Pfam domain/function: PF04551 GcpE [H]
EC number: =1.17.7.1 [H]
Molecular weight: Translated: 46575; Mature: 46575
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSEAQSQSSSKIVSNEPVFGGQAARRKSHAVDVRWGGQLVTIGGDAPVRVQSMTNTDTA CCCCHHCCCCCCCCCCCCCCCCHHHHCCCCEEEEEECCEEEEECCCCCEEEEECCCCCHH DAIGTAIQIKELAQAGSELVRITVNTPEAAAAVPAVREQLDRMGVSVPLVGDFHYNGHLL HHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCEEE LRDYPACAEALSKYRINPGNVGHGAKRDTQFAQMVEAAAKYDKPVRIGVNWGSLDQDLLA EECCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHH KMMDENAARSTPWEAQSVMYEALIQSAIGSAERAVELGLSRNQIILSCKVSGVQDLIAVY HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEECCCHHHHHHHH RELARRCDFALHLGLTEAGMGSKGIVASTAALSVLLQQGIGDTIRISLTPEPGGSRTGEV HHHHHHCCEEEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCE IVGQEILQTMGLRSFTPMVIACPGCGRTTSTLFQELASQIQTYLRTQMPVWRDQYPGVEK EECHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHH MHVAVMGCIVNGPGESKQANIGISLPGSGENPAAPVFIDGEKVKTLRGENIAQEFQQIVS HHEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEECCCHHHHHCCCHHHHHHHHHHH DYVERRYGRAEALN HHHHHHCCCHHCCC >Mature Secondary Structure MHSEAQSQSSSKIVSNEPVFGGQAARRKSHAVDVRWGGQLVTIGGDAPVRVQSMTNTDTA CCCCHHCCCCCCCCCCCCCCCCHHHHCCCCEEEEEECCEEEEECCCCCEEEEECCCCCHH DAIGTAIQIKELAQAGSELVRITVNTPEAAAAVPAVREQLDRMGVSVPLVGDFHYNGHLL HHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCEEE LRDYPACAEALSKYRINPGNVGHGAKRDTQFAQMVEAAAKYDKPVRIGVNWGSLDQDLLA EECCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHH KMMDENAARSTPWEAQSVMYEALIQSAIGSAERAVELGLSRNQIILSCKVSGVQDLIAVY HHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEECCCHHHHHHHH RELARRCDFALHLGLTEAGMGSKGIVASTAALSVLLQQGIGDTIRISLTPEPGGSRTGEV HHHHHHCCEEEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCE IVGQEILQTMGLRSFTPMVIACPGCGRTTSTLFQELASQIQTYLRTQMPVWRDQYPGVEK EECHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHH MHVAVMGCIVNGPGESKQANIGISLPGSGENPAAPVFIDGEKVKTLRGENIAQEFQQIVS HHEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEECCCHHHHHCCCHHHHHHHHHHH DYVERRYGRAEALN HHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA