| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is hisS [H]
Identifier: 91784206
GI number: 91784206
Start: 3150434
End: 3151774
Strand: Reverse
Name: hisS [H]
Synonym: Bxe_A1595
Alternate gene names: 91784206
Gene position: 3151774-3150434 (Counterclockwise)
Preceding gene: 91784207
Following gene: 91784205
Centisome position: 64.38
GC content: 58.99
Gene sequence:
>1341_bases ATGACTGAACAGAAGAAAAAGCTCGAAAAGCTGTCCGGCGTGAAGGGCATGAACGACATCCTTCCGCAGGAAGCCGGGCT GTGGGAATTTTTTGAAACCACCGTCAAGTCTATGCTGCGTTCGTACGGATACCAGAATATCCGTACGCCGATCATCGAGC ATACGCAGCTGTTCAAGCGCGGTATCGGTGAGGTGACCGATATCGTCGAGAAAGAGATGTACAGCTTTACCGACGCGCTC AATGGTGAAAATCTGACCATGCGGCCGGAAAATACGGCAGCGGTGGTGCGCGCGGCGATCGAACACAACATGCTGTACGA CGGCCCGAAGCGCCTGTGGTACATCGGTCCGATGTTCCGTCACGAGCGTCCGCAGCGCGGCCGCTATCGCCAGTTCCATC AGGTCGGTGTGGAAGCGCTGGGCTTTGCCGGTCCGGACGCCGACGCTGAAATCATCATGATGTGCCAGCGCCTGTGGGAC GATCTCGGGCTGATGGGCATCAAGCTCGAACTCAATTCGCTGGGTCTCGCGCACGAACGCGCGGCGCATCGTGTCGAACT GATCGCGTACCTCGAAAAGCACATGGACGTGCTCGACGAAGAAGCGAAGCGTCGTCTCTACACGAACCCGCTGCGCGTGC TCGATACGAAGAATCCGGCCATGCAGGAAGTCGCGCAGAACGCGCCGAAGCTGATCGATTTTCTCGGCGAAGAATCGCGC GCGCACTTCGAAGGTTTGCAGCGCATTCTGAAGGCGAACAATATTCCGTTCACGATCAATCAGCGTCTCGTGCGCGGTCT CGATTATTACAATCTGACCGTGTTCGAATGGGTGACCGACAAGCTCGGCGCGCAAGGCACCGTTGCGGCCGGCGGCCGTT ACGATCCGCTGATCGAACAGCTCGGCGGCAAGCCCACGGCGGCATGCGGCTGGGCAATGGGCATCGAGCGGATCCTCGAA TTGCTGAAAGAAGAGCAACTCGTGCCGGAAGACGAAGGTTGCGACGTGTACGTGGTCCATCAGGGCGAGGCGGCGCGCGA ACAGGCCTTCATCATTGCCGAGCGTTTGCGCGACACGGGCCTCGACGTCATCCTGCATTGCAGTGCCGACGGTCAGACGG CCAGCTTCAAATCGCAGATGAAGCGTGCGGATGCAAGCGGCGCGGCCTTTGCGGTGGTGCTCGGTGAAGACGAGATCGCC AACGGCACGGTCGGCGTGAAACCGTTGCGCGATACGAATGCTGACGGCGGTAAAAACGAGCAACACAACGTGCCCGCCGA AGACTTGACCGAATTTCTAATCAATGCGATGGTTGCAACCGCCGAAGACGGCGACGACTGA
Upstream 100 bases:
>100_bases AAACATCGCCCAAGAATTCCAGCAAATCGTGAGTGACTACGTCGAGCGCCGCTACGGCCGCGCCGAAGCGCTCAATTAAA TATCGGCTACCGAAAGACAG
Downstream 100 bases:
>100_bases TCGCGATGTCGTCGAGCCGGTTGGTTTCCAATCGGACTCGACACGCACATGTAGCAAGAAAGAGGAAATCGCCGGGCAAT GAGTTACCACGACGAACAAG
Product: histidyl-tRNA synthetase
Products: NA
Alternate protein names: Histidine--tRNA ligase; HisRS [H]
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MTEQKKKLEKLSGVKGMNDILPQEAGLWEFFETTVKSMLRSYGYQNIRTPIIEHTQLFKRGIGEVTDIVEKEMYSFTDAL NGENLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWD DLGLMGIKLELNSLGLAHERAAHRVELIAYLEKHMDVLDEEAKRRLYTNPLRVLDTKNPAMQEVAQNAPKLIDFLGEESR AHFEGLQRILKANNIPFTINQRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILE LLKEEQLVPEDEGCDVYVVHQGEAAREQAFIIAERLRDTGLDVILHCSADGQTASFKSQMKRADASGAAFAVVLGEDEIA NGTVGVKPLRDTNADGGKNEQHNVPAEDLTEFLINAMVATAEDGDD
Sequences:
>Translated_446_residues MTEQKKKLEKLSGVKGMNDILPQEAGLWEFFETTVKSMLRSYGYQNIRTPIIEHTQLFKRGIGEVTDIVEKEMYSFTDAL NGENLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWD DLGLMGIKLELNSLGLAHERAAHRVELIAYLEKHMDVLDEEAKRRLYTNPLRVLDTKNPAMQEVAQNAPKLIDFLGEESR AHFEGLQRILKANNIPFTINQRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILE LLKEEQLVPEDEGCDVYVVHQGEAAREQAFIIAERLRDTGLDVILHCSADGQTASFKSQMKRADASGAAFAVVLGEDEIA NGTVGVKPLRDTNADGGKNEQHNVPAEDLTEFLINAMVATAEDGDD >Mature_445_residues TEQKKKLEKLSGVKGMNDILPQEAGLWEFFETTVKSMLRSYGYQNIRTPIIEHTQLFKRGIGEVTDIVEKEMYSFTDALN GENLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDD LGLMGIKLELNSLGLAHERAAHRVELIAYLEKHMDVLDEEAKRRLYTNPLRVLDTKNPAMQEVAQNAPKLIDFLGEESRA HFEGLQRILKANNIPFTINQRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQLGGKPTAACGWAMGIERILEL LKEEQLVPEDEGCDVYVVHQGEAAREQAFIIAERLRDTGLDVILHCSADGQTASFKSQMKRADASGAAFAVVLGEDEIAN GTVGVKPLRDTNADGGKNEQHNVPAEDLTEFLINAMVATAEDGDD
Specific function: Unknown
COG id: COG0124
COG function: function code J; Histidyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Escherichia coli, GI1788861, Length=407, Percent_Identity=56.5110565110565, Blast_Score=458, Evalue=1e-130,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002314 - InterPro: IPR006195 - InterPro: IPR004154 - InterPro: IPR015807 - InterPro: IPR004516 [H]
Pfam domain/function: PF03129 HGTP_anticodon; PF00587 tRNA-synt_2b [H]
EC number: =6.1.1.21 [H]
Molecular weight: Translated: 49931; Mature: 49800
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQKKKLEKLSGVKGMNDILPQEAGLWEFFETTVKSMLRSYGYQNIRTPIIEHTQLFKR CCCHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHH GIGEVTDIVEKEMYSFTDALNGENLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFR CCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCEEEECHHHH HERPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLMGIKLELNSLGLAHER CCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEHHHCCCHHHH AAHRVELIAYLEKHMDVLDEEAKRRLYTNPLRVLDTKNPAMQEVAQNAPKLIDFLGEESR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCHHHHHHHHCCHHHHHHHCCCHH AHFEGLQRILKANNIPFTINQRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ HHHHHHHHHHHHCCCCEEHHHHHHHCCCCCCHHHHHHHHHHHCCCCEECCCCCCCHHHHH LGGKPTAACGWAMGIERILELLKEEQLVPEDEGCDVYVVHQGEAAREQAFIIAERLRDTG HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCC LDVILHCSADGQTASFKSQMKRADASGAAFAVVLGEDEIANGTVGVKPLRDTNADGGKNE CEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC QHNVPAEDLTEFLINAMVATAEDGDD CCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TEQKKKLEKLSGVKGMNDILPQEAGLWEFFETTVKSMLRSYGYQNIRTPIIEHTQLFKR CCHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHH GIGEVTDIVEKEMYSFTDALNGENLTMRPENTAAVVRAAIEHNMLYDGPKRLWYIGPMFR CCHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCEEEECHHHH HERPQRGRYRQFHQVGVEALGFAGPDADAEIIMMCQRLWDDLGLMGIKLELNSLGLAHER CCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEHHHCCCHHHH AAHRVELIAYLEKHMDVLDEEAKRRLYTNPLRVLDTKNPAMQEVAQNAPKLIDFLGEESR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCHHHHHHHHCCHHHHHHHCCCHH AHFEGLQRILKANNIPFTINQRLVRGLDYYNLTVFEWVTDKLGAQGTVAAGGRYDPLIEQ HHHHHHHHHHHHCCCCEEHHHHHHHCCCCCCHHHHHHHHHHHCCCCEECCCCCCCHHHHH LGGKPTAACGWAMGIERILELLKEEQLVPEDEGCDVYVVHQGEAAREQAFIIAERLRDTG HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCC LDVILHCSADGQTASFKSQMKRADASGAAFAVVLGEDEIANGTVGVKPLRDTNADGGKNE CEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC QHNVPAEDLTEFLINAMVATAEDGDD CCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA