| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yfgM [C]
Identifier: 91784205
GI number: 91784205
Start: 3149726
End: 3150355
Strand: Reverse
Name: yfgM [C]
Synonym: Bxe_A1596
Alternate gene names: 91784205
Gene position: 3150355-3149726 (Counterclockwise)
Preceding gene: 91784206
Following gene: 91784204
Centisome position: 64.35
GC content: 63.97
Gene sequence:
>630_bases ATGAGTTACCACGACGAACAAGAATCGATTGAAAGTCTGAAGGCATGGTGGACGCAGTGGGGCAATGCAACCACATGGAT CGTGCTGGTGGCACTGGTGGCCGCGGCCGGCTGGAACGGCTGGAATTTCTGGCAGCGGCGCGAGGCGGCGGAAGCCGCCG TGCTGTATGACCAGGTGCAGCAAGCCGTGGCATCGGGCGACAAGGCAAAGATCACGCGCGTCGCCGCCGACATGGAAGAC AGGTTCGGCCGCACCGCGTATGCGCAGATGACCGCGCTGGGCGCCGCCAGGGCGCTGTACGCGGCGGGCGACGAGGCCGC CGCGAAGGCGCAACTGCAATGGACCATCGATCACGCAAAAGACGACGAGTTCAGGCAGATTGCGAAACTGCGTCTCGCTT CGCTGCTGCTCGACGACAAGGCTTACGACCAGGGTCTTGCGCTGCTCGCCGAACCGCAGTCCGACGCGTTCAAAGGCATC GTGGCGAACGGCCGCGGCGATCTGCTCGCCGCTCAAGGCAAGCGTGACGATGCGCGCGCGGCCTACAAGCTCGCGCTCGA CTCGCTGTCGAAAAACGATAGTTCGGCACGCCAGTTGATTCAGTTCAAGCTGGACGCGCTGGGCGGCTGA
Upstream 100 bases:
>100_bases CGCCGAAGACGGCGACGACTGATCGCGATGTCGTCGAGCCGGTTGGTTTCCAATCGGACTCGACACGCACATGTAGCAAG AAAGAGGAAATCGCCGGGCA
Downstream 100 bases:
>100_bases TTGCCGCATGCAGCGCGCCGCATGCAACGACCAGTTGGTCTCTTTTAACTAATTTCCTGAATGCTTCGTCCACCGATGAA TCTGCTGAAACGTTACGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MSYHDEQESIESLKAWWTQWGNATTWIVLVALVAAAGWNGWNFWQRREAAEAAVLYDQVQQAVASGDKAKITRVAADMED RFGRTAYAQMTALGAARALYAAGDEAAAKAQLQWTIDHAKDDEFRQIAKLRLASLLLDDKAYDQGLALLAEPQSDAFKGI VANGRGDLLAAQGKRDDARAAYKLALDSLSKNDSSARQLIQFKLDALGG
Sequences:
>Translated_209_residues MSYHDEQESIESLKAWWTQWGNATTWIVLVALVAAAGWNGWNFWQRREAAEAAVLYDQVQQAVASGDKAKITRVAADMED RFGRTAYAQMTALGAARALYAAGDEAAAKAQLQWTIDHAKDDEFRQIAKLRLASLLLDDKAYDQGLALLAEPQSDAFKGI VANGRGDLLAAQGKRDDARAAYKLALDSLSKNDSSARQLIQFKLDALGG >Mature_208_residues SYHDEQESIESLKAWWTQWGNATTWIVLVALVAAAGWNGWNFWQRREAAEAAVLYDQVQQAVASGDKAKITRVAADMEDR FGRTAYAQMTALGAARALYAAGDEAAAKAQLQWTIDHAKDDEFRQIAKLRLASLLLDDKAYDQGLALLAEPQSDAFKGIV ANGRGDLLAAQGKRDDARAAYKLALDSLSKNDSSARQLIQFKLDALGG
Specific function: Unknown
COG id: COG2976
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 TPR repeat [H]
Homologues:
Organism=Escherichia coli, GI1788860, Length=205, Percent_Identity=25.8536585365854, Blast_Score=64, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018704 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF09976 DUF2133 [H]
EC number: NA
Molecular weight: Translated: 22863; Mature: 22732
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYHDEQESIESLKAWWTQWGNATTWIVLVALVAAAGWNGWNFWQRREAAEAAVLYDQVQ CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH QAVASGDKAKITRVAADMEDRFGRTAYAQMTALGAARALYAAGDEAAAKAQLQWTIDHAK HHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEEECCCC DDEFRQIAKLRLASLLLDDKAYDQGLALLAEPQSDAFKGIVANGRGDLLAAQGKRDDARA CHHHHHHHHHHHHHHHHCCHHHHCCCEEEECCCCHHHHHEEECCCCCEEEECCCCCHHHH AYKLALDSLSKNDSSARQLIQFKLDALGG HHHHHHHHHCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SYHDEQESIESLKAWWTQWGNATTWIVLVALVAAAGWNGWNFWQRREAAEAAVLYDQVQ CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH QAVASGDKAKITRVAADMEDRFGRTAYAQMTALGAARALYAAGDEAAAKAQLQWTIDHAK HHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEEECCCC DDEFRQIAKLRLASLLLDDKAYDQGLALLAEPQSDAFKGIVANGRGDLLAAQGKRDDARA CHHHHHHHHHHHHHHHHCCHHHHCCCEEEECCCCHHHHHEEECCCCCEEEECCCCCHHHH AYKLALDSLSKNDSSARQLIQFKLDALGG HHHHHHHHHCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10655208 [H]