| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is 91784126
Identifier: 91784126
GI number: 91784126
Start: 3056551
End: 3057843
Strand: Reverse
Name: 91784126
Synonym: Bxe_A1675
Alternate gene names: NA
Gene position: 3057843-3056551 (Counterclockwise)
Preceding gene: 91784127
Following gene: 91784125
Centisome position: 62.46
GC content: 67.59
Gene sequence:
>1293_bases ATGGACGAGTTGACACTCGGTTTGATCGGCGCGGGTGCCGTGGTGGTCGGGGGCGTGGTCGTGTACAACGCGTGGCAGGG CGCGAAGGTGCGCCGCAAGATGCCGCGGCCAATGCCGGCCGACGCCGCGGAAAACTTCACGCGGGACGATCAGGAGGAAC AGAGCCCGTTCATCGAGCCGGCTCGGCCCACCATGCGCCGCGAACCGGTGGTGGGCACCGAAGCGGCGGAGCAGACCGCG TCGGCGCGCGTCGAGCCGACGTTCGGCAGCCCCGCCGCGACGGCCGCGCCGCTCGATACGCCGGCCGATATCCAGGCCGA AACGACCACGCCGAATGGCTACCCGGAAGCCGAGGGCGTGGCTCAAGCCGAAGGCGGCGATCATGCGGAGGCCGGCAAGA CCGCGCCGGCCGCCCGCCAGGACGACGAGCCGGTCGAACCGATTCTGCCCGCCGCCACGACGATTTCATCGGCGCCGCCG GCTATCGTCGATCGGCGCATCGACTGTATCGTGCCGATCCGCCTGAACGGCCCGGTTGCCGGCGACAAGGTGATTCCGCT TGCGCAGCGCCTGCGCCGCGCGGGCAGCAAGCCGGTGCATATCGAGGGCAAACTCGAAGGCGGCGCGTGGGAACTGCTGC AAAACGGCGCGCGTTATGAAGAGTTGCGCGCGGCCGCGCAATTGGCGAACCGCAGCGGCGCGCTCAACGAACTGGAGTTT TCCGAGTTCGTGACCGGCGTGCAGCAATTTGCCGACGCGCTGGATGCCTCGCCGGAATTCCCGGACATGCTGGAAACGGT CGCGATGGCGCGCGAACTCGACGGCTTCGCCGCGCAGTGCGACGCGCAGTTGTCGATCAACGTGCTCTCCGATGGCGCGC CGTGGTCCGCCAACTACGTGCAGGCAATCGCCTCGCAGGACGGCCTACTGCTGTCGCGCGACGGTACGCGTTTCGTCAAG CTCGACGCGCGGCAAAGCCCGGTGTTCATGCTGCAATTCGGCGATACTAATTTCCTGCGCGACGACCTGACCTACAAGGG CGGCCAGATGATCACGCTGGTGCTCGACGTGCCGGTGGCCGACGAAGACATCCTGCCGTTCCGCCTGATGTGCGACTACG CGAAATCGCTGGCGGAGCGCATTGGCGGGCGGGTGGTCGACGACGGCCGGCGTCCGTTGCCTGAAACCGCGTTGCTCGCA ATCGAAAAGCAGCTCATGACCCTCTACGCGAAGCTCGAACAGGCGGGCATCCCGGCGGGTTCGCCGGCCACGCGCCGGTT GTTCAGCCAGTAA
Upstream 100 bases:
>100_bases GAATCGCGGGTGTCCGCGTTCAGCGCAGCGGCCGGTGGCCGCGCGACACGTGGAGCGGGCGCTAGGCCGCGCAGATAAAA GAATTGCTGATGGAGCATGC
Downstream 100 bases:
>100_bases TTTCTACGTTTTACCGGTGTCCGCAGCGGCCGCACGATGTGCGGCCGCTGTCGTTTCAGGCGCCGCGTTCGCACGCGCCG TTCGCGTGGACGCGCCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRKMPRPMPADAAENFTRDDQEEQSPFIEPARPTMRREPVVGTEAAEQTA SARVEPTFGSPAATAAPLDTPADIQAETTTPNGYPEAEGVAQAEGGDHAEAGKTAPAARQDDEPVEPILPAATTISSAPP AIVDRRIDCIVPIRLNGPVAGDKVIPLAQRLRRAGSKPVHIEGKLEGGAWELLQNGARYEELRAAAQLANRSGALNELEF SEFVTGVQQFADALDASPEFPDMLETVAMARELDGFAAQCDAQLSINVLSDGAPWSANYVQAIASQDGLLLSRDGTRFVK LDARQSPVFMLQFGDTNFLRDDLTYKGGQMITLVLDVPVADEDILPFRLMCDYAKSLAERIGGRVVDDGRRPLPETALLA IEKQLMTLYAKLEQAGIPAGSPATRRLFSQ
Sequences:
>Translated_430_residues MDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRKMPRPMPADAAENFTRDDQEEQSPFIEPARPTMRREPVVGTEAAEQTA SARVEPTFGSPAATAAPLDTPADIQAETTTPNGYPEAEGVAQAEGGDHAEAGKTAPAARQDDEPVEPILPAATTISSAPP AIVDRRIDCIVPIRLNGPVAGDKVIPLAQRLRRAGSKPVHIEGKLEGGAWELLQNGARYEELRAAAQLANRSGALNELEF SEFVTGVQQFADALDASPEFPDMLETVAMARELDGFAAQCDAQLSINVLSDGAPWSANYVQAIASQDGLLLSRDGTRFVK LDARQSPVFMLQFGDTNFLRDDLTYKGGQMITLVLDVPVADEDILPFRLMCDYAKSLAERIGGRVVDDGRRPLPETALLA IEKQLMTLYAKLEQAGIPAGSPATRRLFSQ >Mature_430_residues MDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRKMPRPMPADAAENFTRDDQEEQSPFIEPARPTMRREPVVGTEAAEQTA SARVEPTFGSPAATAAPLDTPADIQAETTTPNGYPEAEGVAQAEGGDHAEAGKTAPAARQDDEPVEPILPAATTISSAPP AIVDRRIDCIVPIRLNGPVAGDKVIPLAQRLRRAGSKPVHIEGKLEGGAWELLQNGARYEELRAAAQLANRSGALNELEF SEFVTGVQQFADALDASPEFPDMLETVAMARELDGFAAQCDAQLSINVLSDGAPWSANYVQAIASQDGLLLSRDGTRFVK LDARQSPVFMLQFGDTNFLRDDLTYKGGQMITLVLDVPVADEDILPFRLMCDYAKSLAERIGGRVVDDGRRPLPETALLA IEKQLMTLYAKLEQAGIPAGSPATRRLFSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46084; Mature: 46084
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRKMPRPMPADAAENFTRDDQEEQSPFIEP CCCCEEEEECCCHHHHCCEEEEECCCCCHHHHHCCCCCCCCHHHHCCCCCHHHCCCCCCC ARPTMRREPVVGTEAAEQTASARVEPTFGSPAATAAPLDTPADIQAETTTPNGYPEAEGV CCCCHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC AQAEGGDHAEAGKTAPAARQDDEPVEPILPAATTISSAPPAIVDRRIDCIVPIRLNGPVA EECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHCCCCEEEEEEEECCCCC GDKVIPLAQRLRRAGSKPVHIEGKLEGGAWELLQNGARYEELRAAAQLANRSGALNELEF CCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHH SEFVTGVQQFADALDASPEFPDMLETVAMARELDGFAAQCDAQLSINVLSDGAPWSANYV HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHCCCEEEEEEECCCCCCCHHHH QAIASQDGLLLSRDGTRFVKLDARQSPVFMLQFGDTNFLRDDLTYKGGQMITLVLDVPVA HHHHCCCCEEEECCCCEEEEEECCCCCEEEEEECCCCHHHHCCCCCCCEEEEEEEECCCC DEDILPFRLMCDYAKSLAERIGGRVVDDGRRPLPETALLAIEKQLMTLYAKLEQAGIPAG CCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC SPATRRLFSQ CHHHHHHHCC >Mature Secondary Structure MDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRKMPRPMPADAAENFTRDDQEEQSPFIEP CCCCEEEEECCCHHHHCCEEEEECCCCCHHHHHCCCCCCCCHHHHCCCCCHHHCCCCCCC ARPTMRREPVVGTEAAEQTASARVEPTFGSPAATAAPLDTPADIQAETTTPNGYPEAEGV CCCCHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC AQAEGGDHAEAGKTAPAARQDDEPVEPILPAATTISSAPPAIVDRRIDCIVPIRLNGPVA EECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHCCCCEEEEEEEECCCCC GDKVIPLAQRLRRAGSKPVHIEGKLEGGAWELLQNGARYEELRAAAQLANRSGALNELEF CCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHH SEFVTGVQQFADALDASPEFPDMLETVAMARELDGFAAQCDAQLSINVLSDGAPWSANYV HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHCCCEEEEEEECCCCCCCHHHH QAIASQDGLLLSRDGTRFVKLDARQSPVFMLQFGDTNFLRDDLTYKGGQMITLVLDVPVA HHHHCCCCEEEECCCCEEEEEECCCCCEEEEEECCCCHHHHCCCCCCCEEEEEEEECCCC DEDILPFRLMCDYAKSLAERIGGRVVDDGRRPLPETALLAIEKQLMTLYAKLEQAGIPAG CCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC SPATRRLFSQ CHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA