| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is fabZ [H]
Identifier: 91784108
GI number: 91784108
Start: 3034664
End: 3035128
Strand: Reverse
Name: fabZ [H]
Synonym: Bxe_A1693
Alternate gene names: 91784108
Gene position: 3035128-3034664 (Counterclockwise)
Preceding gene: 91784109
Following gene: 91784107
Centisome position: 61.99
GC content: 58.28
Gene sequence:
>465_bases ATGAGCACCGAAAAAATCAATCTCGACATTCATAAGATTCTCACGCTGCTGCCACATCGTTACCCGATCCTGCTGGTGGA CCGGGTGCTCGAACTCGAGCCGCACAAGAACATCAAAGCGTTGAAGAACGTGTCGATCAACGAACCGTATTTCCAGGGCC ACTTTCCGACCCGTCCGGTCATGCCGGGCGTGCTGATTCTCGAAGCGCTCGCGCAAACGGCGGCTTTGCTGACGTTTTCG GAAGAGCCGAGCGACCCGTCGAACACGCTGTATCTGTTCGTCGGCATCGACAATGCACGCTTCAAGCGCGTGGTGGAACC GGGCGATCAGCTGATCCTGAACTGCACGTTCGAGCGTCATATGCGCGGCATCTGGAAGTTCAAGGCGCGCGCCGAAGTGG ATGGCGTAGTAGCGGCGGAAGCCGACCTGATGTGCGCGGTGCGGCACACGGACAAGGACGCTTGA
Upstream 100 bases:
>100_bases GCCGCCGGGTTATGGCGAGCGCCGGCAGCATGCGTTATCAACCCACCTGCACCAGCATCCGCAGTCATCATCGCGCAGTC AATGCGTGAGTAGAAACACC
Downstream 100 bases:
>100_bases GCTAGCGTCCCGGCGCTCAGCGGCGCGACGCGTGCGCTGAGCGCCCCGCCAGATGCCCACCCAGACAACGCAACAGAATC AGAAGCGAGGACGCATGAGC
Product: (3R)-hydroxymyristoyl-ACP dehydratase
Products: trans-Delta2-enoyl-acyl-ACP; H2O [C]
Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase [H]
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSTEKINLDIHKILTLLPHRYPILLVDRVLELEPHKNIKALKNVSINEPYFQGHFPTRPVMPGVLILEALAQTAALLTFS EEPSDPSNTLYLFVGIDNARFKRVVEPGDQLILNCTFERHMRGIWKFKARAEVDGVVAAEADLMCAVRHTDKDA
Sequences:
>Translated_154_residues MSTEKINLDIHKILTLLPHRYPILLVDRVLELEPHKNIKALKNVSINEPYFQGHFPTRPVMPGVLILEALAQTAALLTFS EEPSDPSNTLYLFVGIDNARFKRVVEPGDQLILNCTFERHMRGIWKFKARAEVDGVVAAEADLMCAVRHTDKDA >Mature_153_residues STEKINLDIHKILTLLPHRYPILLVDRVLELEPHKNIKALKNVSINEPYFQGHFPTRPVMPGVLILEALAQTAALLTFSE EPSDPSNTLYLFVGIDNARFKRVVEPGDQLILNCTFERHMRGIWKFKARAEVDGVVAAEADLMCAVRHTDKDA
Specific function: Involved in saturated fatty acids biosynthesis [H]
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioester dehydratase family. FabZ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786377, Length=146, Percent_Identity=55.4794520547945, Blast_Score=171, Evalue=2e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013114 - InterPro: IPR010084 [H]
Pfam domain/function: PF07977 FabA [H]
EC number: 4.2.1.- [C]
Molecular weight: Translated: 17430; Mature: 17298
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTEKINLDIHKILTLLPHRYPILLVDRVLELEPHKNIKALKNVSINEPYFQGHFPTRPV CCCCEECCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCEECCCCCCCCC MPGVLILEALAQTAALLTFSEEPSDPSNTLYLFVGIDNARFKRVVEPGDQLILNCTFERH CCHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEEECCCHHHHHHCCCCCEEEEEEEHHHH MRGIWKFKARAEVDGVVAAEADLMCAVRHTDKDA HHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCC >Mature Secondary Structure STEKINLDIHKILTLLPHRYPILLVDRVLELEPHKNIKALKNVSINEPYFQGHFPTRPV CCCEECCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCEECCCCCCCCC MPGVLILEALAQTAALLTFSEEPSDPSNTLYLFVGIDNARFKRVVEPGDQLILNCTFERH CCHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEEECCCHHHHHHCCCCCEEEEEEEHHHH MRGIWKFKARAEVDGVVAAEADLMCAVRHTDKDA HHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: D-3-hydroxy-acyl-ACP [C]
Specific reaction: D-3-hydroxy-acyl-ACP = trans-Delta2-enoyl-acyl-ACP + H2O [C]
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA