| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is lpxA [H]
Identifier: 91784107
GI number: 91784107
Start: 3033781
End: 3034569
Strand: Reverse
Name: lpxA [H]
Synonym: Bxe_A1694
Alternate gene names: 91784107
Gene position: 3034569-3033781 (Counterclockwise)
Preceding gene: 91784108
Following gene: 91784106
Centisome position: 61.98
GC content: 65.15
Gene sequence:
>789_bases ATGAGCAGGATTCATCCCACTGCGATCGTCGAACCGGGCGCGCAACTCGACGAATCCGTCGAAGTCGGACCGTATGCCGT GATCGGCGCGCATGTAACGATCGGCGCGCGCACCACGGTCGGTTCGCACAGCGTGATCGAAGGTCACACCACGCTCGGCG AAGACAATCGGATCGGCCACTACGCATCGGTCGGCGGCCGTCCGCAGGACATGAAGTACAAGGACGAGCCGACCCGGCTC GTGATCGGCAGCCGCAACACGATCCGCGAGTTCACCACGATCCACACCGGCACGGTGCAGGACTCGGGCGTCACCACACT CGGCGACGACAACTGGATCATGGCGTACGTGCACATCGGGCACGATTGCCACGTCGGCAACAACGTCATTCTGTCGAGCA ATGCGCAGATGGCCGGCCACGTCATCATCGGCGACCACGCGATCGTCGGCGGCATGTCGGGCGTCCATCAGTTCGTGCGT ATCGGCGCGCATTCCATGCTGGGCGGCGCGTCGGCGCTGGTGCAGGACATTCCGCCGTTCGTGATCGCCGCCGGCAACAA GGCCGAACCGCACGGCATCAACGTGGAAGGTCTGCGCCGCCGCGGCTTCTCGCCGGACGCGATCTCGGCGTTGCGCGCGG CTTATCGCGTGCTGTACAAGAACGGCCTGTCGCTGGAAGAGGCGAAGGTGCAGCTGCGTGAACTCGCGTCCGCCGGCGGC GACGGTGACGAACCGGTGCAGACACTGCTCGCGTTCGTCGAAGCGTCGCAACGCGGCATCATCCGCTAA
Upstream 100 bases:
>100_bases GCTTGAGCTAGCGTCCCGGCGCTCAGCGGCGCGACGCGTGCGCTGAGCGCCCCGCCAGATGCCCACCCAGACAACGCAAC AGAATCAGAAGCGAGGACGC
Downstream 100 bases:
>100_bases CCGATGGCATTGCAACCTAGTCCACTGCGAGTGGCGATGGTGGCCGGCGAGCCGTCCGGCGACCTGCTGGCGGCGTCGCT GCTCGACGGCCTCGCGAGCC
Product: UDP-N-acetylglucosamine acyltransferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine acyltransferase [H]
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MSRIHPTAIVEPGAQLDESVEVGPYAVIGAHVTIGARTTVGSHSVIEGHTTLGEDNRIGHYASVGGRPQDMKYKDEPTRL VIGSRNTIREFTTIHTGTVQDSGVTTLGDDNWIMAYVHIGHDCHVGNNVILSSNAQMAGHVIIGDHAIVGGMSGVHQFVR IGAHSMLGGASALVQDIPPFVIAAGNKAEPHGINVEGLRRRGFSPDAISALRAAYRVLYKNGLSLEEAKVQLRELASAGG DGDEPVQTLLAFVEASQRGIIR
Sequences:
>Translated_262_residues MSRIHPTAIVEPGAQLDESVEVGPYAVIGAHVTIGARTTVGSHSVIEGHTTLGEDNRIGHYASVGGRPQDMKYKDEPTRL VIGSRNTIREFTTIHTGTVQDSGVTTLGDDNWIMAYVHIGHDCHVGNNVILSSNAQMAGHVIIGDHAIVGGMSGVHQFVR IGAHSMLGGASALVQDIPPFVIAAGNKAEPHGINVEGLRRRGFSPDAISALRAAYRVLYKNGLSLEEAKVQLRELASAGG DGDEPVQTLLAFVEASQRGIIR >Mature_261_residues SRIHPTAIVEPGAQLDESVEVGPYAVIGAHVTIGARTTVGSHSVIEGHTTLGEDNRIGHYASVGGRPQDMKYKDEPTRLV IGSRNTIREFTTIHTGTVQDSGVTTLGDDNWIMAYVHIGHDCHVGNNVILSSNAQMAGHVIIGDHAIVGGMSGVHQFVRI GAHSMLGGASALVQDIPPFVIAAGNKAEPHGINVEGLRRRGFSPDAISALRAAYRVLYKNGLSLEEAKVQLRELASAGGD GDEPVQTLLAFVEASQRGIIR
Specific function: Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell [H]
COG id: COG1043
COG function: function code M; Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family. LpxA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786378, Length=259, Percent_Identity=51.7374517374517, Blast_Score=278, Evalue=3e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001451 - InterPro: IPR010137 - InterPro: IPR011004 [H]
Pfam domain/function: PF00132 Hexapep [H]
EC number: =2.3.1.129 [H]
Molecular weight: Translated: 27760; Mature: 27629
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIHPTAIVEPGAQLDESVEVGPYAVIGAHVTIGARTTVGSHSVIEGHTTLGEDNRIGH CCCCCCCEEECCCCCCCCCCCCCCEEEEEEEEEECCEEECCCCCEEECCCCCCCCCCCCC YASVGGRPQDMKYKDEPTRLVIGSRNTIREFTTIHTGTVQDSGVTTLGDDNWIMAYVHIG CCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHEEECCCCCCCCCEEECCCCEEEEEEEEC HDCHVGNNVILSSNAQMAGHVIIGDHAIVGGMSGVHQFVRIGAHSMLGGASALVQDIPPF CEEECCCEEEEECCCCEEEEEEECCCCEECCHHHHHHHHHHHHHHHHCHHHHHHHHCCCE VIAAGNKAEPHGINVEGLRRRGFSPDAISALRAAYRVLYKNGLSLEEAKVQLRELASAGG EEECCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC DGDEPVQTLLAFVEASQRGIIR CCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SRIHPTAIVEPGAQLDESVEVGPYAVIGAHVTIGARTTVGSHSVIEGHTTLGEDNRIGH CCCCCCEEECCCCCCCCCCCCCCEEEEEEEEEECCEEECCCCCEEECCCCCCCCCCCCC YASVGGRPQDMKYKDEPTRLVIGSRNTIREFTTIHTGTVQDSGVTTLGDDNWIMAYVHIG CCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHEEECCCCCCCCCEEECCCCEEEEEEEEC HDCHVGNNVILSSNAQMAGHVIIGDHAIVGGMSGVHQFVRIGAHSMLGGASALVQDIPPF CEEECCCEEEEECCCCEEEEEEECCCCEECCHHHHHHHHHHHHHHHHCHHHHHHHHCCCE VIAAGNKAEPHGINVEGLRRRGFSPDAISALRAAYRVLYKNGLSLEEAKVQLRELASAGG EEECCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC DGDEPVQTLLAFVEASQRGIIR CCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA