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The map label for this gene is intZ [H]

Identifier: 91784092

GI number: 91784092

Start: 3017136

End: 3018476

Strand: Reverse

Name: intZ [H]

Synonym: Bxe_A1709

Alternate gene names: 91784092

Gene position: 3018476-3017136 (Counterclockwise)

Preceding gene: 91784093

Following gene: 91784081

Centisome position: 61.65

GC content: 55.11

Gene sequence:

>1341_bases
ATGCTCACCGATATGCAATTACGAGCGCTGAAACCCGGCGAAAAAATCTACAAGGTGGCTGACCAGCAAGGGCTGTACGT
CGCGGTAATGCCTTCTGGTGGGATGAGTTTCCGGTACGACTATCGAGTAAATGGCCGCCGAGAAACCTTGGTCATTGGCC
GGTATGATCCGCAAGCACCGGCCCGGAAACTGCGCGAATCGGATCAGTTAAGTTTTGGTATGTCGGTCAGCCTCGCGGAA
GCTCGCCTTTTGCATGCCCAAGCTCGGAGGGAGATCCAGCAAGGAAACAGTCCCTCGCGCTCGAAAGTCGAAAAGCGGGT
GCAAGCCAACGACGCCTTCACGTTTGGAAACTGGGCAGAGAAGTATTTCGCAGAAGCCACTCTGGCCGATTCAACGCGCT
CGATGCGCAAGTCCGTGTACGAGCGCAACCTCGCGTCGGAATTTGACAAGCTGAAGCTGGAGGAAATCACGCCGGCTCGA
CTAATGGCGCGATGCGAGAAGATCAAGGCGCGTGGTGCCGCTGCTCAGGCGATCCACGCAAGGGAAATCGTGCTGCAGGT
ATTTCGCTTCGTGCAGGCGAGGGGAATCAAGGTCGACAACCCGGCTGCGTCCATCAGACCCAGTGCGATCGCCACATTCA
AAGCGCGGGACAGGGCGCTGAACCCGGAAGAGATTCATGTCTTCTTCAATGTCCTCGAGCAGGTAGCCACCATGTCGACG
TTACGTCTCGCAGTCAAGTTCATGCTGCTGACGCTTGTTCGTAAATCGGAATTTATCGACGCTACTTGGGACGAGGTTGA
TTTTGAGGCTGCAACCTGGACCATTCCCAAGGAGCGAATGAAGGCTGGGCGGCCTCATCGAGTCTACTTGAGCGAACAGG
CGTTGGAGATCCTCGTGGCCTTCAAGACTTGTTTTGGGGCTAGCATGTACCTGCACCCAGGAAGATATGAGACCGCCTCT
CCGATTAGCGCAGCGACCCTGAATCGGGTGATCGATAGCACGGTGAAGCTGATCAATGACAGGGGCGACGAGTTTGAATC
ATTTACCGTGCACGACCTACGTCGCACGGCGAGCACGCTGTTGCATGAAGCGGGATTTAACACAGACTGGATAGAGAAAT
GCCTTGCGCACGAACAGCGTGGTGTACGCGCGATCTACAACAAAGCGGAATATGCGGATCAGCGAAGAACGATGCTTCAG
GCGTGGGCGGATATGGTAGATCGGTGGATCAAAGAAAAGCCTCGCGCAACATTCGATTCGCGTGGAGGCAAAAATGTCGT
TGCGCTGTCTAGGACCCGCTATACCGATATGCTGAAAGATAGTCTGAATGGCTCGGCGTGA

Upstream 100 bases:

>100_bases
ACTGTTGACGGTATCGATATTCCCTCCTCGGACGGCCTTGCCCGATACCGTCAAGCTGCTGTGACGGTATCGGTTGACGG
TATACGTTCGAGGAGGCTGT

Downstream 100 bases:

>100_bases
TTCGCTGGCGAGTTCGAACCCCACCGTCTCCGCCAGCAATTGCCGTGGAACCCCGCAGAGTCAAGGCTCTGCGGGGTTTT
ATTTTTTTTACGACCTACAA

Product: putative phage integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MLTDMQLRALKPGEKIYKVADQQGLYVAVMPSGGMSFRYDYRVNGRRETLVIGRYDPQAPARKLRESDQLSFGMSVSLAE
ARLLHAQARREIQQGNSPSRSKVEKRVQANDAFTFGNWAEKYFAEATLADSTRSMRKSVYERNLASEFDKLKLEEITPAR
LMARCEKIKARGAAAQAIHAREIVLQVFRFVQARGIKVDNPAASIRPSAIATFKARDRALNPEEIHVFFNVLEQVATMST
LRLAVKFMLLTLVRKSEFIDATWDEVDFEAATWTIPKERMKAGRPHRVYLSEQALEILVAFKTCFGASMYLHPGRYETAS
PISAATLNRVIDSTVKLINDRGDEFESFTVHDLRRTASTLLHEAGFNTDWIEKCLAHEQRGVRAIYNKAEYADQRRTMLQ
AWADMVDRWIKEKPRATFDSRGGKNVVALSRTRYTDMLKDSLNGSA

Sequences:

>Translated_446_residues
MLTDMQLRALKPGEKIYKVADQQGLYVAVMPSGGMSFRYDYRVNGRRETLVIGRYDPQAPARKLRESDQLSFGMSVSLAE
ARLLHAQARREIQQGNSPSRSKVEKRVQANDAFTFGNWAEKYFAEATLADSTRSMRKSVYERNLASEFDKLKLEEITPAR
LMARCEKIKARGAAAQAIHAREIVLQVFRFVQARGIKVDNPAASIRPSAIATFKARDRALNPEEIHVFFNVLEQVATMST
LRLAVKFMLLTLVRKSEFIDATWDEVDFEAATWTIPKERMKAGRPHRVYLSEQALEILVAFKTCFGASMYLHPGRYETAS
PISAATLNRVIDSTVKLINDRGDEFESFTVHDLRRTASTLLHEAGFNTDWIEKCLAHEQRGVRAIYNKAEYADQRRTMLQ
AWADMVDRWIKEKPRATFDSRGGKNVVALSRTRYTDMLKDSLNGSA
>Mature_446_residues
MLTDMQLRALKPGEKIYKVADQQGLYVAVMPSGGMSFRYDYRVNGRRETLVIGRYDPQAPARKLRESDQLSFGMSVSLAE
ARLLHAQARREIQQGNSPSRSKVEKRVQANDAFTFGNWAEKYFAEATLADSTRSMRKSVYERNLASEFDKLKLEEITPAR
LMARCEKIKARGAAAQAIHAREIVLQVFRFVQARGIKVDNPAASIRPSAIATFKARDRALNPEEIHVFFNVLEQVATMST
LRLAVKFMLLTLVRKSEFIDATWDEVDFEAATWTIPKERMKAGRPHRVYLSEQALEILVAFKTCFGASMYLHPGRYETAS
PISAATLNRVIDSTVKLINDRGDEFESFTVHDLRRTASTLLHEAGFNTDWIEKCLAHEQRGVRAIYNKAEYADQRRTMLQ
AWADMVDRWIKEKPRATFDSRGGKNVVALSRTRYTDMLKDSLNGSA

Specific function: Integrase is necessary for integration of the phage into the host genome by site-specific recombination. In conjunction with excisionase, integrase is also necessary for excision of the prophage from the host genome [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI145693166, Length=414, Percent_Identity=30.9178743961353, Blast_Score=164, Evalue=9e-42,
Organism=Escherichia coli, GI1788974, Length=413, Percent_Identity=28.3292978208232, Blast_Score=154, Evalue=9e-39,
Organism=Escherichia coli, GI1788690, Length=412, Percent_Identity=28.8834951456311, Blast_Score=146, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 50720; Mature: 50720

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTDMQLRALKPGEKIYKVADQQGLYVAVMPSGGMSFRYDYRVNGRRETLVIGRYDPQAP
CCCCCCHHCCCCHHHHHHHHCCCCCEEEEECCCCCEEEEEEEECCCEEEEEEECCCCCCH
ARKLRESDQLSFGMSVSLAEARLLHAQARREIQQGNSPSRSKVEKRVQANDAFTFGNWAE
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEECCHHHH
KYFAEATLADSTRSMRKSVYERNLASEFDKLKLEEITPARLMARCEKIKARGAAAQAIHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHH
REIVLQVFRFVQARGIKVDNPAASIRPSAIATFKARDRALNPEEIHVFFNVLEQVATMST
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHEEHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LRLAVKFMLLTLVRKSEFIDATWDEVDFEAATWTIPKERMKAGRPHRVYLSEQALEILVA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHCCCCCEEEEHHHHHHHHHH
FKTCFGASMYLHPGRYETASPISAATLNRVIDSTVKLINDRGDEFESFTVHDLRRTASTL
HHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LHEAGFNTDWIEKCLAHEQRGVRAIYNKAEYADQRRTMLQAWADMVDRWIKEKPRATFDS
HHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
RGGKNVVALSRTRYTDMLKDSLNGSA
CCCCEEEEEEHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLTDMQLRALKPGEKIYKVADQQGLYVAVMPSGGMSFRYDYRVNGRRETLVIGRYDPQAP
CCCCCCHHCCCCHHHHHHHHCCCCCEEEEECCCCCEEEEEEEECCCEEEEEEECCCCCCH
ARKLRESDQLSFGMSVSLAEARLLHAQARREIQQGNSPSRSKVEKRVQANDAFTFGNWAE
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEECCHHHH
KYFAEATLADSTRSMRKSVYERNLASEFDKLKLEEITPARLMARCEKIKARGAAAQAIHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHH
REIVLQVFRFVQARGIKVDNPAASIRPSAIATFKARDRALNPEEIHVFFNVLEQVATMST
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHEEHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LRLAVKFMLLTLVRKSEFIDATWDEVDFEAATWTIPKERMKAGRPHRVYLSEQALEILVA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHCCCCCEEEEHHHHHHHHHH
FKTCFGASMYLHPGRYETASPISAATLNRVIDSTVKLINDRGDEFESFTVHDLRRTASTL
HHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LHEAGFNTDWIEKCLAHEQRGVRAIYNKAEYADQRRTMLQAWADMVDRWIKEKPRATFDS
HHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
RGGKNVVALSRTRYTDMLKDSLNGSA
CCCCEEEEEEHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]