| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91784037
Identifier: 91784037
GI number: 91784037
Start: 2959184
End: 2960704
Strand: Reverse
Name: 91784037
Synonym: Bxe_A1766
Alternate gene names: NA
Gene position: 2960704-2959184 (Counterclockwise)
Preceding gene: 91784038
Following gene: 91784036
Centisome position: 60.47
GC content: 67.06
Gene sequence:
>1521_bases ATGGCTCAGACAACTTCGGCTCATGAGGCCGATCCGGTCATCAACGTGATCGAGCAGGACGTACCGGGCGGCGACGGCGG TCCGGTGCAGTCCGAGGTTTATCCGGGCACGCTGGATTCGGCCGCGATGGATGCGGTCTCTGCGAGGCGCCGGCGTGAGT TCGACGCCGCCCGCGCAAGGTTGCGCGACCAGGCAGTCCGGGACGATCCCGGTGCGGGAGCACACGCGGCGCAGCAGGGA GGAGCACCGGCACCGGCCGGAATGGCGTCTGCGGTCGATCGTGGTTACGTGCCGCTTGAGCGGCCGCCCGAGCGCGTGAC CAAACGCTATATGCGCTCGGGCAACCAGTATTTCCTGAAGGACGCGCCGTTCCAGCTCGCCTTCGAGGACCTGGGACCGT ACCTCGTCACCGAGCATAACCGGCCGGACGTGGTCGAGTCGATGCTCGACATGGCACATGCCAAATCGTGGCAACGCATC CGCGTGTCGGGCCACGAAGCATTCCGCAGCGAGGTCTGGCTGCAGGCGACATTGCTGGGTATCGAGGTGAGCGGCTACGA GCCGAAGGCGGCGGACCTGGCGCGTCTCGCCGATGCCCGGCAGGCGCGGCTCGACAATCGTATCGAGGTGGCGACGGCGG CAGCTACGGGGCAACAGAGCCGCGCGGATGCGCAGTCGCCCGTGTTTCCGGTGACGCCTTCTGTTGCCGCAGCTACCGTC AATGGAACGTCATCTCCTGCGCGGGTGCACGATGTTGTGCGGGAACCGCGCACCCCGCAGGCGGACCGGAAAGCAGGCAG CGACGAACCCGATGCGCCGAGGCGTTATGCCGGTGAACTGCGCGAGCATGGCAGCGCGCCGTACCTGCATAATCCCGCGC GCACTGACTCCTATTACGTGGTATTCCGCGATCCGGCAGGCGTCGATCAGGCAGTGTGGGGTGTCGACCTCGAACGCGCC GTGCGTGAGTCGGGAGCTGGCGTCGGCCAGGAGGTCGTCCTCGAAAATCTCGGCAAGCGCCTCGTGACGGTGCGCGTGCC GGTCTTCGACGGCGAAGGCAACGTGGTGCGCGAGGAAGACAAGGACGTTTACCGGAATACCTGGCAGGTCGACGTCGTGC AGCGCGACCGGGAGTCGGCCATTCCCGCGCAACCCGATCGTCCCTCGGATGACGCGCACGTCGCCGATTCCCTGGCCGCG CATGTTACGGAGGCACCTCCGCGCCGTCAGCATGATGCCCGACATCCGGAAAACGACTGGGTCATGCAGATGACCGTGCT GGCGACGGCGATGCGGGAACAGGGTTTCGGAGAACGTTCGATCGCCCGCGTGCAGCAGCGTGCCGAACGGATGCTCGTTG CCTTCGGGAAGGAGGGCGTCTCCGTCCCGCCGCCGAAGGTATTCGATCCGAAGGCGCCGTCGGGCCGGGATCAGCGCAGG CGTTCGGCACCGGAGCGGACCCTTGCGCCTGAAATCGATCGCGAGCCGGCCGCGCCGGCACCGATGTCGCCGTCACGCTG A
Upstream 100 bases:
>100_bases GAGCCAGGTTCTTCCCGCGAGCCGGGCGCGCACCCCGATCGATAGCAGATGGCTCGCGACTCGCGGGCAAGACCGTTCCT GAAGGATATGAGGTGGCGAT
Downstream 100 bases:
>100_bases GGCAGATCGTGGCCGCGCGTGAGCGTCTGTGCGTCGAACTCGGTGCCGTCAGGCTGCGCTGGGACGACTGGTGTGCGCGT CGTGGTCTGACGGCCGGCGA
Product: putative DNA primase, DNA transfer TraO- like protein
Products: NA
Alternate protein names: DNA Primase DNA Transfer TraO- Like Protein; DNA Primase; Relaxase; DNA Primase TraC
Number of amino acids: Translated: 506; Mature: 505
Protein sequence:
>506_residues MAQTTSAHEADPVINVIEQDVPGGDGGPVQSEVYPGTLDSAAMDAVSARRRREFDAARARLRDQAVRDDPGAGAHAAQQG GAPAPAGMASAVDRGYVPLERPPERVTKRYMRSGNQYFLKDAPFQLAFEDLGPYLVTEHNRPDVVESMLDMAHAKSWQRI RVSGHEAFRSEVWLQATLLGIEVSGYEPKAADLARLADARQARLDNRIEVATAAATGQQSRADAQSPVFPVTPSVAAATV NGTSSPARVHDVVREPRTPQADRKAGSDEPDAPRRYAGELREHGSAPYLHNPARTDSYYVVFRDPAGVDQAVWGVDLERA VRESGAGVGQEVVLENLGKRLVTVRVPVFDGEGNVVREEDKDVYRNTWQVDVVQRDRESAIPAQPDRPSDDAHVADSLAA HVTEAPPRRQHDARHPENDWVMQMTVLATAMREQGFGERSIARVQQRAERMLVAFGKEGVSVPPPKVFDPKAPSGRDQRR RSAPERTLAPEIDREPAAPAPMSPSR
Sequences:
>Translated_506_residues MAQTTSAHEADPVINVIEQDVPGGDGGPVQSEVYPGTLDSAAMDAVSARRRREFDAARARLRDQAVRDDPGAGAHAAQQG GAPAPAGMASAVDRGYVPLERPPERVTKRYMRSGNQYFLKDAPFQLAFEDLGPYLVTEHNRPDVVESMLDMAHAKSWQRI RVSGHEAFRSEVWLQATLLGIEVSGYEPKAADLARLADARQARLDNRIEVATAAATGQQSRADAQSPVFPVTPSVAAATV NGTSSPARVHDVVREPRTPQADRKAGSDEPDAPRRYAGELREHGSAPYLHNPARTDSYYVVFRDPAGVDQAVWGVDLERA VRESGAGVGQEVVLENLGKRLVTVRVPVFDGEGNVVREEDKDVYRNTWQVDVVQRDRESAIPAQPDRPSDDAHVADSLAA HVTEAPPRRQHDARHPENDWVMQMTVLATAMREQGFGERSIARVQQRAERMLVAFGKEGVSVPPPKVFDPKAPSGRDQRR RSAPERTLAPEIDREPAAPAPMSPSR >Mature_505_residues AQTTSAHEADPVINVIEQDVPGGDGGPVQSEVYPGTLDSAAMDAVSARRRREFDAARARLRDQAVRDDPGAGAHAAQQGG APAPAGMASAVDRGYVPLERPPERVTKRYMRSGNQYFLKDAPFQLAFEDLGPYLVTEHNRPDVVESMLDMAHAKSWQRIR VSGHEAFRSEVWLQATLLGIEVSGYEPKAADLARLADARQARLDNRIEVATAAATGQQSRADAQSPVFPVTPSVAAATVN GTSSPARVHDVVREPRTPQADRKAGSDEPDAPRRYAGELREHGSAPYLHNPARTDSYYVVFRDPAGVDQAVWGVDLERAV RESGAGVGQEVVLENLGKRLVTVRVPVFDGEGNVVREEDKDVYRNTWQVDVVQRDRESAIPAQPDRPSDDAHVADSLAAH VTEAPPRRQHDARHPENDWVMQMTVLATAMREQGFGERSIARVQQRAERMLVAFGKEGVSVPPPKVFDPKAPSGRDQRRR SAPERTLAPEIDREPAAPAPMSPSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55304; Mature: 55173
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQTTSAHEADPVINVIEQDVPGGDGGPVQSEVYPGTLDSAAMDAVSARRRREFDAARAR CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LRDQAVRDDPGAGAHAAQQGGAPAPAGMASAVDRGYVPLERPPERVTKRYMRSGNQYFLK HHHHHHCCCCCCCCHHHHCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEE DAPFQLAFEDLGPYLVTEHNRPDVVESMLDMAHAKSWQRIRVSGHEAFRSEVWLQATLLG CCCHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHEEEEEEE IEVSGYEPKAADLARLADARQARLDNRIEVATAAATGQQSRADAQSPVFPVTPSVAAATV EEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHCCCHHHCCCCCCCCCCCCCCEEEEE NGTSSPARVHDVVREPRTPQADRKAGSDEPDAPRRYAGELREHGSAPYLHNPARTDSYYV CCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEE VFRDPAGVDQAVWGVDLERAVRESGAGVGQEVVLENLGKRLVTVRVPVFDGEGNVVREED EEECCCCCCHHHHCCCHHHHHHHHCCCCCHHHHHHHCCCEEEEEEEEEECCCCCEECCCC KDVYRNTWQVDVVQRDRESAIPAQPDRPSDDAHVADSLAAHVTEAPPRRQHDARHPENDW HHHHHCCEEEEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH VMQMTVLATAMREQGFGERSIARVQQRAERMLVAFGKEGVSVPPPKVFDPKAPSGRDQRR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH RSAPERTLAPEIDREPAAPAPMSPSR HCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AQTTSAHEADPVINVIEQDVPGGDGGPVQSEVYPGTLDSAAMDAVSARRRREFDAARAR CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LRDQAVRDDPGAGAHAAQQGGAPAPAGMASAVDRGYVPLERPPERVTKRYMRSGNQYFLK HHHHHHCCCCCCCCHHHHCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEE DAPFQLAFEDLGPYLVTEHNRPDVVESMLDMAHAKSWQRIRVSGHEAFRSEVWLQATLLG CCCHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHEEEEEEE IEVSGYEPKAADLARLADARQARLDNRIEVATAAATGQQSRADAQSPVFPVTPSVAAATV EEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHCCCHHHCCCCCCCCCCCCCCEEEEE NGTSSPARVHDVVREPRTPQADRKAGSDEPDAPRRYAGELREHGSAPYLHNPARTDSYYV CCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEE VFRDPAGVDQAVWGVDLERAVRESGAGVGQEVVLENLGKRLVTVRVPVFDGEGNVVREED EEECCCCCCHHHHCCCHHHHHHHHCCCCCHHHHHHHCCCEEEEEEEEEECCCCCEECCCC KDVYRNTWQVDVVQRDRESAIPAQPDRPSDDAHVADSLAAHVTEAPPRRQHDARHPENDW HHHHHCCEEEEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH VMQMTVLATAMREQGFGERSIARVQQRAERMLVAFGKEGVSVPPPKVFDPKAPSGRDQRR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH RSAPERTLAPEIDREPAAPAPMSPSR HCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA