| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91784038
Identifier: 91784038
GI number: 91784038
Start: 2960760
End: 2962625
Strand: Reverse
Name: 91784038
Synonym: Bxe_A1765
Alternate gene names: NA
Gene position: 2962625-2960760 (Counterclockwise)
Preceding gene: 91784039
Following gene: 91784037
Centisome position: 60.51
GC content: 66.4
Gene sequence:
>1866_bases ATGAGCACGCCCTATGCGAACGAGGCCGAGCGCGCGCGTGCCGCCCTTGCTGCGGTCCCGGCCGACGACTACGCGACCTG GGTCGATATGGCATTCGCGCTCAAGCACGGATTCGGTGACGAGGGTTTCGAGATCTGGGATGCCTGGAGTCGCACGGCCG CCAACTATAACGACCGGGCGGCGCGCACGACGTGGCGCTCGGCCAGTGCGTCGGGCGGCAAGACGCTGGCCACGCTGTTC TGGCACGCGCGCCAGCACGGTTTCGATCTCAGCCGCACACATTACCCCGATCAGATGACGGCCGTGCTGGCGCCGTCCGT TGAAGTGCTCGCGCGGCGTGAGCGCGACGAGGCGCAGCGACAGGCACGCCATGCGGCCGTCGCGCGCGAGGCCGCATCGA TCTGGCAATGGGCGCGTCCGGTCGGGCCGGTGCATCCGTATCTTGAGCGCAAGCACCTGGAACCGATGGACACGCTGCGT GAACTGGATGCGCTGGAGCTGCACGCATTGCTCGGTTATGCACCGGCCAGCGAGGAGCAGACGCTCGCGGGACGTGTGCT GATCGTGCCGGTCTGGAACGACCGCTCCATGTCGACGCTGGAACTGATCGACGAGAAGGGACTGAAGTCGTCGCTGGCCG GTGGCGTGAAAAAGGGCGGCTACTGGATGACGGAGTCGACGCTGGTGCCAGACGCCGAGTCGTCGCTGATCCTGATTGCC GAGGGCGTGGCGACGGCATTGTCCGCGTCGCGTGCCACCGGCTGGTTCGCGGTGGCGGCGCTGTCGAGCGGAAACCTGTC GCTGGTGGCGACGCGCCTGCGCGAGCGCTATCCCGAAGCGGACCTGATCGTGCTCGGCGAACTGGGCCGCGGCGAAGCGC AGGCCCGGCAGGCGGCAGAAGACGCGCAGGCGCGCGTGGCCTGGCCGCAGTTCGCCGCCGACGCGCGTATCGACGACAAG GTGCCGAACGATTTCAGCGACATGGCGGTGCTCTCGGGCTTCGAGGCGGTCGGTGCGTACCTGCGTGAGGTGGTCCGTTC TGTCGGGAAAGCGGACGGCGTGAACGTGATTGAAATGGGCGAGCGTGAGGAGGGCGGAGAAGTGGGCAACGTCAAGGAAA AGCTGCTGTCCGACGAAGGTGGCAGTCCGCGTCGTCGGTCATCGAAGCGAAGCACATCGAAACAGGCTGGACCGGATGTA CTCACAGCAGGCGAGCCACCGGCCGCTGCTGAACCGGCGGCGGCCGCACCGGCAGACTCTCCGGCCACCGCATTGTCGGA TGCGGTTCCGCCGACGGTGCCGGCCGCCAGTCCCTCGCGTCTTCCGCCATCGCGTCCGCCGGTCGGCGAACCCCTGTTTG CTGTGGGTGATGTGCCGAACGAGATCAAGGCGCTCGCCGAACACCGGTTCGGTTCGCCGCTGAAGATGGGTACGCCGCGC GAGAACGGCGGGCCGTATCGCGGTGAGGTGTTTTACACCGAGCACTACCTGATCCAGGAGGTCGCGACGCGCAGCGTCGT GTTTCACCGCAAGGATCAGATGACCTTTGTTTCCGACCGTCTGAAATGGATGAACGACAACGCGCGGCTGAATGGTTCCG AGCTGCAGGTCGGCTACGACGGCAGCGAAGCGAAAGTTTATCCGTGGGACCGCGCGCGCGATCTGCTTGACCGGGCCGTG CGTTCACTGAAGAAATCCGCGCAGGAGCTGAACTTCAGTCCCAATCTCGAAGGCATGCTCGACCAGTTGCAGGCGCGGTC GTGGGCACGCATCCGGGAATGGCGGACCGAAGCACTGGAGAAAGCGAAGGAGCCGGCGAAGGAGCCAGGTTCTTCCCGCG AGCCGGGCGCGCACCCCGATCGATAG
Upstream 100 bases:
>100_bases GCCGTCTGGTTGCTGGTGATCTCGATGTCGCCGAACTTGATTTCGTTGCGCCGGCACGGCGCGCCATGTCGAATGGTTCG CAGGCGACGGGAGTGCTGCA
Downstream 100 bases:
>100_bases CAGATGGCTCGCGACTCGCGGGCAAGACCGTTCCTGAAGGATATGAGGTGGCGATATGGCTCAGACAACTTCGGCTCATG AGGCCGATCCGGTCATCAAC
Product: putative DNA replication primase
Products: NA
Alternate protein names: DNA Replication Primase; TOPRIM Domain-Containing Protein; Primase C 2 Superfamily
Number of amino acids: Translated: 621; Mature: 620
Protein sequence:
>621_residues MSTPYANEAERARAALAAVPADDYATWVDMAFALKHGFGDEGFEIWDAWSRTAANYNDRAARTTWRSASASGGKTLATLF WHARQHGFDLSRTHYPDQMTAVLAPSVEVLARRERDEAQRQARHAAVAREAASIWQWARPVGPVHPYLERKHLEPMDTLR ELDALELHALLGYAPASEEQTLAGRVLIVPVWNDRSMSTLELIDEKGLKSSLAGGVKKGGYWMTESTLVPDAESSLILIA EGVATALSASRATGWFAVAALSSGNLSLVATRLRERYPEADLIVLGELGRGEAQARQAAEDAQARVAWPQFAADARIDDK VPNDFSDMAVLSGFEAVGAYLREVVRSVGKADGVNVIEMGEREEGGEVGNVKEKLLSDEGGSPRRRSSKRSTSKQAGPDV LTAGEPPAAAEPAAAAPADSPATALSDAVPPTVPAASPSRLPPSRPPVGEPLFAVGDVPNEIKALAEHRFGSPLKMGTPR ENGGPYRGEVFYTEHYLIQEVATRSVVFHRKDQMTFVSDRLKWMNDNARLNGSELQVGYDGSEAKVYPWDRARDLLDRAV RSLKKSAQELNFSPNLEGMLDQLQARSWARIREWRTEALEKAKEPAKEPGSSREPGAHPDR
Sequences:
>Translated_621_residues MSTPYANEAERARAALAAVPADDYATWVDMAFALKHGFGDEGFEIWDAWSRTAANYNDRAARTTWRSASASGGKTLATLF WHARQHGFDLSRTHYPDQMTAVLAPSVEVLARRERDEAQRQARHAAVAREAASIWQWARPVGPVHPYLERKHLEPMDTLR ELDALELHALLGYAPASEEQTLAGRVLIVPVWNDRSMSTLELIDEKGLKSSLAGGVKKGGYWMTESTLVPDAESSLILIA EGVATALSASRATGWFAVAALSSGNLSLVATRLRERYPEADLIVLGELGRGEAQARQAAEDAQARVAWPQFAADARIDDK VPNDFSDMAVLSGFEAVGAYLREVVRSVGKADGVNVIEMGEREEGGEVGNVKEKLLSDEGGSPRRRSSKRSTSKQAGPDV LTAGEPPAAAEPAAAAPADSPATALSDAVPPTVPAASPSRLPPSRPPVGEPLFAVGDVPNEIKALAEHRFGSPLKMGTPR ENGGPYRGEVFYTEHYLIQEVATRSVVFHRKDQMTFVSDRLKWMNDNARLNGSELQVGYDGSEAKVYPWDRARDLLDRAV RSLKKSAQELNFSPNLEGMLDQLQARSWARIREWRTEALEKAKEPAKEPGSSREPGAHPDR >Mature_620_residues STPYANEAERARAALAAVPADDYATWVDMAFALKHGFGDEGFEIWDAWSRTAANYNDRAARTTWRSASASGGKTLATLFW HARQHGFDLSRTHYPDQMTAVLAPSVEVLARRERDEAQRQARHAAVAREAASIWQWARPVGPVHPYLERKHLEPMDTLRE LDALELHALLGYAPASEEQTLAGRVLIVPVWNDRSMSTLELIDEKGLKSSLAGGVKKGGYWMTESTLVPDAESSLILIAE GVATALSASRATGWFAVAALSSGNLSLVATRLRERYPEADLIVLGELGRGEAQARQAAEDAQARVAWPQFAADARIDDKV PNDFSDMAVLSGFEAVGAYLREVVRSVGKADGVNVIEMGEREEGGEVGNVKEKLLSDEGGSPRRRSSKRSTSKQAGPDVL TAGEPPAAAEPAAAAPADSPATALSDAVPPTVPAASPSRLPPSRPPVGEPLFAVGDVPNEIKALAEHRFGSPLKMGTPRE NGGPYRGEVFYTEHYLIQEVATRSVVFHRKDQMTFVSDRLKWMNDNARLNGSELQVGYDGSEAKVYPWDRARDLLDRAVR SLKKSAQELNFSPNLEGMLDQLQARSWARIREWRTEALEKAKEPAKEPGSSREPGAHPDR
Specific function: Unknown
COG id: COG4643
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67754; Mature: 67623
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPYANEAERARAALAAVPADDYATWVDMAFALKHGFGDEGFEIWDAWSRTAANYNDRA CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHH ARTTWRSASASGGKTLATLFWHARQHGFDLSRTHYPDQMTAVLAPSVEVLARRERDEAQR HHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHH QARHAAVAREAASIWQWARPVGPVHPYLERKHLEPMDTLRELDALELHALLGYAPASEEQ HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC TLAGRVLIVPVWNDRSMSTLELIDEKGLKSSLAGGVKKGGYWMTESTLVPDAESSLILIA HHCCCEEEEEECCCCCCHHHHHHHHCCHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEEE EGVATALSASRATGWFAVAALSSGNLSLVATRLRERYPEADLIVLGELGRGEAQARQAAE CHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH DAQARVAWPQFAADARIDDKVPNDFSDMAVLSGFEAVGAYLREVVRSVGKADGVNVIEMG HHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECC EREEGGEVGNVKEKLLSDEGGSPRRRSSKRSTSKQAGPDVLTAGEPPAAAEPAAAAPADS CCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCC PATALSDAVPPTVPAASPSRLPPSRPPVGEPLFAVGDVPNEIKALAEHRFGSPLKMGTPR CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCC ENGGPYRGEVFYTEHYLIQEVATRSVVFHRKDQMTFVSDRLKWMNDNARLNGSELQVGYD CCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEECCCEEEEEEC GSEAKVYPWDRARDLLDRAVRSLKKSAQELNFSPNLEGMLDQLQARSWARIREWRTEALE CCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KAKEPAKEPGSSREPGAHPDR HHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure STPYANEAERARAALAAVPADDYATWVDMAFALKHGFGDEGFEIWDAWSRTAANYNDRA CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHH ARTTWRSASASGGKTLATLFWHARQHGFDLSRTHYPDQMTAVLAPSVEVLARRERDEAQR HHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHH QARHAAVAREAASIWQWARPVGPVHPYLERKHLEPMDTLRELDALELHALLGYAPASEEQ HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC TLAGRVLIVPVWNDRSMSTLELIDEKGLKSSLAGGVKKGGYWMTESTLVPDAESSLILIA HHCCCEEEEEECCCCCCHHHHHHHHCCHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEEE EGVATALSASRATGWFAVAALSSGNLSLVATRLRERYPEADLIVLGELGRGEAQARQAAE CHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH DAQARVAWPQFAADARIDDKVPNDFSDMAVLSGFEAVGAYLREVVRSVGKADGVNVIEMG HHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECC EREEGGEVGNVKEKLLSDEGGSPRRRSSKRSTSKQAGPDVLTAGEPPAAAEPAAAAPADS CCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCC PATALSDAVPPTVPAASPSRLPPSRPPVGEPLFAVGDVPNEIKALAEHRFGSPLKMGTPR CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCC ENGGPYRGEVFYTEHYLIQEVATRSVVFHRKDQMTFVSDRLKWMNDNARLNGSELQVGYD CCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEECCCEEEEEEC GSEAKVYPWDRARDLLDRAVRSLKKSAQELNFSPNLEGMLDQLQARSWARIREWRTEALE CCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KAKEPAKEPGSSREPGAHPDR HHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA