| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yhfA [H]
Identifier: 91783991
GI number: 91783991
Start: 2902971
End: 2904629
Strand: Direct
Name: yhfA [H]
Synonym: Bxe_A1817
Alternate gene names: 91783991
Gene position: 2902971-2904629 (Clockwise)
Preceding gene: 91783989
Following gene: 91783992
Centisome position: 59.29
GC content: 61.72
Gene sequence:
>1659_bases ATGTTTGAGTCATCTTCGACGATGGTCATCCGAAGCAGCCTTATTACCTGTATATCCGATTATCCGAGCCGAGGTTCCCA CATGCACTCCCTCACCCTCCTCACTCCAGCACATTTCTGTTATCTGGTCGGAGTAGTGGCGATCGTTGCCACAATGATCT TCCGGGCGAACGTTGTCGTCCCCGCGATCCTTGCTACTTTTGCGGTCGCATTCGCCTATTCGGGCAAGGTACTCGTCGGG CTGCAAGCCATCTTTCTGGGCAGCCTCACTGCCGCCCACGAGTTGTTCAACATTTTTCTCGTCATCGCATTGATGACCGC GCTTCTCAACGGATTGCGCGAAATCGGCGCCGATGTCCGGATGGTCCGGCCATTCAGGAAGATCATGGTCAACGGCCACG TGGCCTTTTTCATCCTGGCGTTGATTACGTATCTGATTTCGCTGTTCTTCTGGCCGACACCGGCTGTGCCGCTCGTGGGC GCGATTCTGATCCCGGCGGCTATCTATGCCGGCCTCTCTCCGCTGGGCGCCGCCGTTGCCATTGCGATTGCCGGCCAGGG TATGGCGCTCTCGTCGGACTACGTCATCAAGGTCGCACCCGGCATCAGCGCGAAGGCAGCGGGTACCGATATGCTGCCGG TGGCCAACACTGCCCTTCTGCTGTCCCTCATCGCCGGCGCCGTCGCGCTGGCTCTCAGCTGGTATCTCACCGTGCGTCGG AACGTGCGGAAACCCGGCGCCATCAATCTGGTCGAATGGGAATCGTCGGGTGAGATCGACCCCACTGCCCAGCCCGAGGC TCACCAGGGCAGCTTTGCAAAAGCAGAACTCGCGCGCAGCACGGCCGGCATGCATGACGAAGACGTCGACGCTTTGCCGG CTGTTTCCTCTGCCGGTGCTGCGTCGATGGCGCTGCCCGCGATGGGCGGAGGGGTCATTCTCCCTCCGAAACGGGAGATG TGGTCCAAGGTGTTCTCGATCGTCACGCCGCTCACCTTCCTCGCGGTGGTGATCGTCATGACGCAGCCGGAACTGGTCGG CGCAACGGTCATTCGCGGGGGCGATGCGGCTGCGCTGATCGGGGGCATGGCAGCCGTGCTGATGATGCTCACGACGCTCT CTTACGGCCGCAAGGGCTTTCTGGACAGGACGGCCGGCCACATCATCGACGGTCTGGTGTTCGCCTTCAAGGCGATGGGC GCCGTTCTTCCCATTGCCGGCTTTTTCTTCGTGGGCGACGCCAGCACCGCTGGCCCGATTCTCGGCATCGAGTCCGGCGT CCATGTTCCGTCGCTGCTGTTCGAACTGGTTCAGGCGTGCAGTCAGTTCATTCCGCACAGTCCGGTTCTCGTTTCTCTGG GCGTGTTGTTGACGGGGATGATCACCGGAATCGACGGTTCGGGATTCGCCGGTCTTCCGCTGACGGGCTCGTTATCCGGC GCGCTTGCCCCGTTGGCCCATATGCCTGCGTCTACATTGGCCGCGATCGGGCAGATGGGCGCGGTGTGGACGGGTGGCGG CACGCTCGTTGCCTGGTCTTCCCTTATCGCAGTCACGGGGTTCGCACGTGTACCCGTCCTGGACGCGGTTCGGGTACTGT TCGTCCCCGTGGTATCCGGTCTCGTGATTGCCACGCTCGTCGCCGTCGCGATTAGCTGA
Upstream 100 bases:
>100_bases GTCGCAACACGGTAACTGGAGAGGGGTCAGCACCACGCCTGAATACATTTCAATTTAGTAGCACTGAGCTAATTACGCAG GTGATTCAGGTTACCCGGAG
Downstream 100 bases:
>100_bases ACGGTCGGGAAGTCATGTCAATCTCCCTGACCTCCGCGACGTTGGCGCACGAAGGCTGGGCCGCGCTGCAGATTGTATTC GTCAACGTTCTGCTGGGGGG
Product: IT superfamily transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 552; Mature: 552
Protein sequence:
>552_residues MFESSSTMVIRSSLITCISDYPSRGSHMHSLTLLTPAHFCYLVGVVAIVATMIFRANVVVPAILATFAVAFAYSGKVLVG LQAIFLGSLTAAHELFNIFLVIALMTALLNGLREIGADVRMVRPFRKIMVNGHVAFFILALITYLISLFFWPTPAVPLVG AILIPAAIYAGLSPLGAAVAIAIAGQGMALSSDYVIKVAPGISAKAAGTDMLPVANTALLLSLIAGAVALALSWYLTVRR NVRKPGAINLVEWESSGEIDPTAQPEAHQGSFAKAELARSTAGMHDEDVDALPAVSSAGAASMALPAMGGGVILPPKREM WSKVFSIVTPLTFLAVVIVMTQPELVGATVIRGGDAAALIGGMAAVLMMLTTLSYGRKGFLDRTAGHIIDGLVFAFKAMG AVLPIAGFFFVGDASTAGPILGIESGVHVPSLLFELVQACSQFIPHSPVLVSLGVLLTGMITGIDGSGFAGLPLTGSLSG ALAPLAHMPASTLAAIGQMGAVWTGGGTLVAWSSLIAVTGFARVPVLDAVRVLFVPVVSGLVIATLVAVAIS
Sequences:
>Translated_552_residues MFESSSTMVIRSSLITCISDYPSRGSHMHSLTLLTPAHFCYLVGVVAIVATMIFRANVVVPAILATFAVAFAYSGKVLVG LQAIFLGSLTAAHELFNIFLVIALMTALLNGLREIGADVRMVRPFRKIMVNGHVAFFILALITYLISLFFWPTPAVPLVG AILIPAAIYAGLSPLGAAVAIAIAGQGMALSSDYVIKVAPGISAKAAGTDMLPVANTALLLSLIAGAVALALSWYLTVRR NVRKPGAINLVEWESSGEIDPTAQPEAHQGSFAKAELARSTAGMHDEDVDALPAVSSAGAASMALPAMGGGVILPPKREM WSKVFSIVTPLTFLAVVIVMTQPELVGATVIRGGDAAALIGGMAAVLMMLTTLSYGRKGFLDRTAGHIIDGLVFAFKAMG AVLPIAGFFFVGDASTAGPILGIESGVHVPSLLFELVQACSQFIPHSPVLVSLGVLLTGMITGIDGSGFAGLPLTGSLSG ALAPLAHMPASTLAAIGQMGAVWTGGGTLVAWSSLIAVTGFARVPVLDAVRVLFVPVVSGLVIATLVAVAIS >Mature_552_residues MFESSSTMVIRSSLITCISDYPSRGSHMHSLTLLTPAHFCYLVGVVAIVATMIFRANVVVPAILATFAVAFAYSGKVLVG LQAIFLGSLTAAHELFNIFLVIALMTALLNGLREIGADVRMVRPFRKIMVNGHVAFFILALITYLISLFFWPTPAVPLVG AILIPAAIYAGLSPLGAAVAIAIAGQGMALSSDYVIKVAPGISAKAAGTDMLPVANTALLLSLIAGAVALALSWYLTVRR NVRKPGAINLVEWESSGEIDPTAQPEAHQGSFAKAELARSTAGMHDEDVDALPAVSSAGAASMALPAMGGGVILPPKREM WSKVFSIVTPLTFLAVVIVMTQPELVGATVIRGGDAAALIGGMAAVLMMLTTLSYGRKGFLDRTAGHIIDGLVFAFKAMG AVLPIAGFFFVGDASTAGPILGIESGVHVPSLLFELVQACSQFIPHSPVLVSLGVLLTGMITGIDGSGFAGLPLTGSLSG ALAPLAHMPASTLAAIGQMGAVWTGGGTLVAWSSLIAVTGFARVPVLDAVRVLFVPVVSGLVIATLVAVAIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56836; Mature: 56836
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFESSSTMVIRSSLITCISDYPSRGSHMHSLTLLTPAHFCYLVGVVAIVATMIFRANVVV CCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH PAILATFAVAFAYSGKVLVGLQAIFLGSLTAAHELFNIFLVIALMTALLNGLREIGADVR HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH MVRPFRKIMVNGHVAFFILALITYLISLFFWPTPAVPLVGAILIPAAIYAGLSPLGAAVA HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH IAIAGQGMALSSDYVIKVAPGISAKAAGTDMLPVANTALLLSLIAGAVALALSWYLTVRR HHEECCCCEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH NVRKPGAINLVEWESSGEIDPTAQPEAHQGSFAKAELARSTAGMHDEDVDALPAVSSAGA CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCC ASMALPAMGGGVILPPKREMWSKVFSIVTPLTFLAVVIVMTQPELVGATVIRGGDAAALI HHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEECCCCHHHHH GGMAAVLMMLTTLSYGRKGFLDRTAGHIIDGLVFAFKAMGAVLPIAGFFFVGDASTAGPI HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC LGIESGVHVPSLLFELVQACSQFIPHSPVLVSLGVLLTGMITGIDGSGFAGLPLTGSLSG EECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH ALAPLAHMPASTLAAIGQMGAVWTGGGTLVAWSSLIAVTGFARVPVLDAVRVLFVPVVSG HHHHHHHCCHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH LVIATLVAVAIS HHHHHHHHHHCC >Mature Secondary Structure MFESSSTMVIRSSLITCISDYPSRGSHMHSLTLLTPAHFCYLVGVVAIVATMIFRANVVV CCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH PAILATFAVAFAYSGKVLVGLQAIFLGSLTAAHELFNIFLVIALMTALLNGLREIGADVR HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH MVRPFRKIMVNGHVAFFILALITYLISLFFWPTPAVPLVGAILIPAAIYAGLSPLGAAVA HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH IAIAGQGMALSSDYVIKVAPGISAKAAGTDMLPVANTALLLSLIAGAVALALSWYLTVRR HHEECCCCEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH NVRKPGAINLVEWESSGEIDPTAQPEAHQGSFAKAELARSTAGMHDEDVDALPAVSSAGA CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCC ASMALPAMGGGVILPPKREMWSKVFSIVTPLTFLAVVIVMTQPELVGATVIRGGDAAALI HHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEECCCCHHHHH GGMAAVLMMLTTLSYGRKGFLDRTAGHIIDGLVFAFKAMGAVLPIAGFFFVGDASTAGPI HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC LGIESGVHVPSLLFELVQACSQFIPHSPVLVSLGVLLTGMITGIDGSGFAGLPLTGSLSG EECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH ALAPLAHMPASTLAAIGQMGAVWTGGGTLVAWSSLIAVTGFARVPVLDAVRVLFVPVVSG HHHHHHHCCHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH LVIATLVAVAIS HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]