Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is yhfA [H]

Identifier: 91783991

GI number: 91783991

Start: 2902971

End: 2904629

Strand: Direct

Name: yhfA [H]

Synonym: Bxe_A1817

Alternate gene names: 91783991

Gene position: 2902971-2904629 (Clockwise)

Preceding gene: 91783989

Following gene: 91783992

Centisome position: 59.29

GC content: 61.72

Gene sequence:

>1659_bases
ATGTTTGAGTCATCTTCGACGATGGTCATCCGAAGCAGCCTTATTACCTGTATATCCGATTATCCGAGCCGAGGTTCCCA
CATGCACTCCCTCACCCTCCTCACTCCAGCACATTTCTGTTATCTGGTCGGAGTAGTGGCGATCGTTGCCACAATGATCT
TCCGGGCGAACGTTGTCGTCCCCGCGATCCTTGCTACTTTTGCGGTCGCATTCGCCTATTCGGGCAAGGTACTCGTCGGG
CTGCAAGCCATCTTTCTGGGCAGCCTCACTGCCGCCCACGAGTTGTTCAACATTTTTCTCGTCATCGCATTGATGACCGC
GCTTCTCAACGGATTGCGCGAAATCGGCGCCGATGTCCGGATGGTCCGGCCATTCAGGAAGATCATGGTCAACGGCCACG
TGGCCTTTTTCATCCTGGCGTTGATTACGTATCTGATTTCGCTGTTCTTCTGGCCGACACCGGCTGTGCCGCTCGTGGGC
GCGATTCTGATCCCGGCGGCTATCTATGCCGGCCTCTCTCCGCTGGGCGCCGCCGTTGCCATTGCGATTGCCGGCCAGGG
TATGGCGCTCTCGTCGGACTACGTCATCAAGGTCGCACCCGGCATCAGCGCGAAGGCAGCGGGTACCGATATGCTGCCGG
TGGCCAACACTGCCCTTCTGCTGTCCCTCATCGCCGGCGCCGTCGCGCTGGCTCTCAGCTGGTATCTCACCGTGCGTCGG
AACGTGCGGAAACCCGGCGCCATCAATCTGGTCGAATGGGAATCGTCGGGTGAGATCGACCCCACTGCCCAGCCCGAGGC
TCACCAGGGCAGCTTTGCAAAAGCAGAACTCGCGCGCAGCACGGCCGGCATGCATGACGAAGACGTCGACGCTTTGCCGG
CTGTTTCCTCTGCCGGTGCTGCGTCGATGGCGCTGCCCGCGATGGGCGGAGGGGTCATTCTCCCTCCGAAACGGGAGATG
TGGTCCAAGGTGTTCTCGATCGTCACGCCGCTCACCTTCCTCGCGGTGGTGATCGTCATGACGCAGCCGGAACTGGTCGG
CGCAACGGTCATTCGCGGGGGCGATGCGGCTGCGCTGATCGGGGGCATGGCAGCCGTGCTGATGATGCTCACGACGCTCT
CTTACGGCCGCAAGGGCTTTCTGGACAGGACGGCCGGCCACATCATCGACGGTCTGGTGTTCGCCTTCAAGGCGATGGGC
GCCGTTCTTCCCATTGCCGGCTTTTTCTTCGTGGGCGACGCCAGCACCGCTGGCCCGATTCTCGGCATCGAGTCCGGCGT
CCATGTTCCGTCGCTGCTGTTCGAACTGGTTCAGGCGTGCAGTCAGTTCATTCCGCACAGTCCGGTTCTCGTTTCTCTGG
GCGTGTTGTTGACGGGGATGATCACCGGAATCGACGGTTCGGGATTCGCCGGTCTTCCGCTGACGGGCTCGTTATCCGGC
GCGCTTGCCCCGTTGGCCCATATGCCTGCGTCTACATTGGCCGCGATCGGGCAGATGGGCGCGGTGTGGACGGGTGGCGG
CACGCTCGTTGCCTGGTCTTCCCTTATCGCAGTCACGGGGTTCGCACGTGTACCCGTCCTGGACGCGGTTCGGGTACTGT
TCGTCCCCGTGGTATCCGGTCTCGTGATTGCCACGCTCGTCGCCGTCGCGATTAGCTGA

Upstream 100 bases:

>100_bases
GTCGCAACACGGTAACTGGAGAGGGGTCAGCACCACGCCTGAATACATTTCAATTTAGTAGCACTGAGCTAATTACGCAG
GTGATTCAGGTTACCCGGAG

Downstream 100 bases:

>100_bases
ACGGTCGGGAAGTCATGTCAATCTCCCTGACCTCCGCGACGTTGGCGCACGAAGGCTGGGCCGCGCTGCAGATTGTATTC
GTCAACGTTCTGCTGGGGGG

Product: IT superfamily transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 552; Mature: 552

Protein sequence:

>552_residues
MFESSSTMVIRSSLITCISDYPSRGSHMHSLTLLTPAHFCYLVGVVAIVATMIFRANVVVPAILATFAVAFAYSGKVLVG
LQAIFLGSLTAAHELFNIFLVIALMTALLNGLREIGADVRMVRPFRKIMVNGHVAFFILALITYLISLFFWPTPAVPLVG
AILIPAAIYAGLSPLGAAVAIAIAGQGMALSSDYVIKVAPGISAKAAGTDMLPVANTALLLSLIAGAVALALSWYLTVRR
NVRKPGAINLVEWESSGEIDPTAQPEAHQGSFAKAELARSTAGMHDEDVDALPAVSSAGAASMALPAMGGGVILPPKREM
WSKVFSIVTPLTFLAVVIVMTQPELVGATVIRGGDAAALIGGMAAVLMMLTTLSYGRKGFLDRTAGHIIDGLVFAFKAMG
AVLPIAGFFFVGDASTAGPILGIESGVHVPSLLFELVQACSQFIPHSPVLVSLGVLLTGMITGIDGSGFAGLPLTGSLSG
ALAPLAHMPASTLAAIGQMGAVWTGGGTLVAWSSLIAVTGFARVPVLDAVRVLFVPVVSGLVIATLVAVAIS

Sequences:

>Translated_552_residues
MFESSSTMVIRSSLITCISDYPSRGSHMHSLTLLTPAHFCYLVGVVAIVATMIFRANVVVPAILATFAVAFAYSGKVLVG
LQAIFLGSLTAAHELFNIFLVIALMTALLNGLREIGADVRMVRPFRKIMVNGHVAFFILALITYLISLFFWPTPAVPLVG
AILIPAAIYAGLSPLGAAVAIAIAGQGMALSSDYVIKVAPGISAKAAGTDMLPVANTALLLSLIAGAVALALSWYLTVRR
NVRKPGAINLVEWESSGEIDPTAQPEAHQGSFAKAELARSTAGMHDEDVDALPAVSSAGAASMALPAMGGGVILPPKREM
WSKVFSIVTPLTFLAVVIVMTQPELVGATVIRGGDAAALIGGMAAVLMMLTTLSYGRKGFLDRTAGHIIDGLVFAFKAMG
AVLPIAGFFFVGDASTAGPILGIESGVHVPSLLFELVQACSQFIPHSPVLVSLGVLLTGMITGIDGSGFAGLPLTGSLSG
ALAPLAHMPASTLAAIGQMGAVWTGGGTLVAWSSLIAVTGFARVPVLDAVRVLFVPVVSGLVIATLVAVAIS
>Mature_552_residues
MFESSSTMVIRSSLITCISDYPSRGSHMHSLTLLTPAHFCYLVGVVAIVATMIFRANVVVPAILATFAVAFAYSGKVLVG
LQAIFLGSLTAAHELFNIFLVIALMTALLNGLREIGADVRMVRPFRKIMVNGHVAFFILALITYLISLFFWPTPAVPLVG
AILIPAAIYAGLSPLGAAVAIAIAGQGMALSSDYVIKVAPGISAKAAGTDMLPVANTALLLSLIAGAVALALSWYLTVRR
NVRKPGAINLVEWESSGEIDPTAQPEAHQGSFAKAELARSTAGMHDEDVDALPAVSSAGAASMALPAMGGGVILPPKREM
WSKVFSIVTPLTFLAVVIVMTQPELVGATVIRGGDAAALIGGMAAVLMMLTTLSYGRKGFLDRTAGHIIDGLVFAFKAMG
AVLPIAGFFFVGDASTAGPILGIESGVHVPSLLFELVQACSQFIPHSPVLVSLGVLLTGMITGIDGSGFAGLPLTGSLSG
ALAPLAHMPASTLAAIGQMGAVWTGGGTLVAWSSLIAVTGFARVPVLDAVRVLFVPVVSGLVIATLVAVAIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56836; Mature: 56836

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: PS00165 DEHYDRATASE_SER_THR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFESSSTMVIRSSLITCISDYPSRGSHMHSLTLLTPAHFCYLVGVVAIVATMIFRANVVV
CCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PAILATFAVAFAYSGKVLVGLQAIFLGSLTAAHELFNIFLVIALMTALLNGLREIGADVR
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
MVRPFRKIMVNGHVAFFILALITYLISLFFWPTPAVPLVGAILIPAAIYAGLSPLGAAVA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH
IAIAGQGMALSSDYVIKVAPGISAKAAGTDMLPVANTALLLSLIAGAVALALSWYLTVRR
HHEECCCCEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVRKPGAINLVEWESSGEIDPTAQPEAHQGSFAKAELARSTAGMHDEDVDALPAVSSAGA
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCC
ASMALPAMGGGVILPPKREMWSKVFSIVTPLTFLAVVIVMTQPELVGATVIRGGDAAALI
HHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEECCCCHHHHH
GGMAAVLMMLTTLSYGRKGFLDRTAGHIIDGLVFAFKAMGAVLPIAGFFFVGDASTAGPI
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC
LGIESGVHVPSLLFELVQACSQFIPHSPVLVSLGVLLTGMITGIDGSGFAGLPLTGSLSG
EECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH
ALAPLAHMPASTLAAIGQMGAVWTGGGTLVAWSSLIAVTGFARVPVLDAVRVLFVPVVSG
HHHHHHHCCHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
LVIATLVAVAIS
HHHHHHHHHHCC
>Mature Secondary Structure
MFESSSTMVIRSSLITCISDYPSRGSHMHSLTLLTPAHFCYLVGVVAIVATMIFRANVVV
CCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PAILATFAVAFAYSGKVLVGLQAIFLGSLTAAHELFNIFLVIALMTALLNGLREIGADVR
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
MVRPFRKIMVNGHVAFFILALITYLISLFFWPTPAVPLVGAILIPAAIYAGLSPLGAAVA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH
IAIAGQGMALSSDYVIKVAPGISAKAAGTDMLPVANTALLLSLIAGAVALALSWYLTVRR
HHEECCCCEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVRKPGAINLVEWESSGEIDPTAQPEAHQGSFAKAELARSTAGMHDEDVDALPAVSSAGA
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCC
ASMALPAMGGGVILPPKREMWSKVFSIVTPLTFLAVVIVMTQPELVGATVIRGGDAAALI
HHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEECCCCHHHHH
GGMAAVLMMLTTLSYGRKGFLDRTAGHIIDGLVFAFKAMGAVLPIAGFFFVGDASTAGPI
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC
LGIESGVHVPSLLFELVQACSQFIPHSPVLVSLGVLLTGMITGIDGSGFAGLPLTGSLSG
EECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH
ALAPLAHMPASTLAAIGQMGAVWTGGGTLVAWSSLIAVTGFARVPVLDAVRVLFVPVVSG
HHHHHHHCCHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
LVIATLVAVAIS
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]