| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yjbE [H]
Identifier: 91783992
GI number: 91783992
Start: 2904644
End: 2905372
Strand: Direct
Name: yjbE [H]
Synonym: Bxe_A1816
Alternate gene names: 91783992
Gene position: 2904644-2905372 (Clockwise)
Preceding gene: 91783991
Following gene: 91783996
Centisome position: 59.33
GC content: 60.22
Gene sequence:
>729_bases ATGTCAATCTCCCTGACCTCCGCGACGTTGGCGCACGAAGGCTGGGCCGCGCTGCAGATTGTATTCGTCAACGTTCTGCT GGGGGGCGATAACGCTATCGCCATCGCAATGGCCTGCCGCTCGCTTCCGCCCAAGCAGCAACGCTTAGGCATCCTTCTTG GTACGGGTCTCGGCATTGTGCTTAGAATAGTGCTGATCGGTATCATTGGAAGACTGCTTGCGATCCCCTTCATGCACGTG ATCGCTGCAGCGCTGCTGATCTGGATCGGCATCCAGCTTGTACGGCCAGGAGAAGACGACCCTTCAGTCAGTCAGGCTAC TGCATTGTGGCGCGCGGTGATGGCGATTTTATGGGCCGATCTCGCGATGAGTCTCGACAACGCACTGGCAACAGCCGCCG TTGCACAGTCGCTACCGGAAGATTCACGCCTGGTCATTGTTTTTGTCGGCCTCGCCCTGGGTGCGCCGGTGATCGCTTTC GGCAGCCAGCTCGTGCTGACATTGCTCGAACGGTTCCCTGCACTCGTGTACGCGGGCGCAGCGGTTCTTGGGTGGATCGC AGGGGAGCTTCTACTGGCGGATCCGACGGTTGGCGGCACACTTCACCAATGGTTGGCGGTGATCCCCGGCATCAGCCCTG CAATTGTCAGCACCTTCACCTGCATCGGCGCCGCAATCCTGGTCCCGCTGTTGGGCCGCGTGATGGTCCACCACAATCGC GCTGGATAG
Upstream 100 bases:
>100_bases CCGTCCTGGACGCGGTTCGGGTACTGTTCGTCCCCGTGGTATCCGGTCTCGTGATTGCCACGCTCGTCGCCGTCGCGATT AGCTGAACGGTCGGGAAGTC
Downstream 100 bases:
>100_bases TATCCGTTACCCGGTCACCACGCTGGCCGGGTAACGGGACTACCGGAAACTTACTCTGCAGCAGCAATTCAAGTTGCGCG TTCGTGCGCATGTCAGAACC
Product: integral membrane protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MSISLTSATLAHEGWAALQIVFVNVLLGGDNAIAIAMACRSLPPKQQRLGILLGTGLGIVLRIVLIGIIGRLLAIPFMHV IAAALLIWIGIQLVRPGEDDPSVSQATALWRAVMAILWADLAMSLDNALATAAVAQSLPEDSRLVIVFVGLALGAPVIAF GSQLVLTLLERFPALVYAGAAVLGWIAGELLLADPTVGGTLHQWLAVIPGISPAIVSTFTCIGAAILVPLLGRVMVHHNR AG
Sequences:
>Translated_242_residues MSISLTSATLAHEGWAALQIVFVNVLLGGDNAIAIAMACRSLPPKQQRLGILLGTGLGIVLRIVLIGIIGRLLAIPFMHV IAAALLIWIGIQLVRPGEDDPSVSQATALWRAVMAILWADLAMSLDNALATAAVAQSLPEDSRLVIVFVGLALGAPVIAF GSQLVLTLLERFPALVYAGAAVLGWIAGELLLADPTVGGTLHQWLAVIPGISPAIVSTFTCIGAAILVPLLGRVMVHHNR AG >Mature_241_residues SISLTSATLAHEGWAALQIVFVNVLLGGDNAIAIAMACRSLPPKQQRLGILLGTGLGIVLRIVLIGIIGRLLAIPFMHVI AAALLIWIGIQLVRPGEDDPSVSQATALWRAVMAILWADLAMSLDNALATAAVAQSLPEDSRLVIVFVGLALGAPVIAFG SQLVLTLLERFPALVYAGAAVLGWIAGELLLADPTVGGTLHQWLAVIPGISPAIVSTFTCIGAAILVPLLGRVMVHHNRA G
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022301 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 25170; Mature: 25038
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISLTSATLAHEGWAALQIVFVNVLLGGDNAIAIAMACRSLPPKQQRLGILLGTGLGIV CCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCHHHHH LRIVLIGIIGRLLAIPFMHVIAAALLIWIGIQLVRPGEDDPSVSQATALWRAVMAILWAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH LAMSLDNALATAAVAQSLPEDSRLVIVFVGLALGAPVIAFGSQLVLTLLERFPALVYAGA HHHHHHHHHHHHHHHHHCCCCCCEEHEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH AVLGWIAGELLLADPTVGGTLHQWLAVIPGISPAIVSTFTCIGAAILVPLLGRVMVHHNR HHHHHHHHHHHEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC AG CC >Mature Secondary Structure SISLTSATLAHEGWAALQIVFVNVLLGGDNAIAIAMACRSLPPKQQRLGILLGTGLGIV CCCCCHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCHHHHH LRIVLIGIIGRLLAIPFMHVIAAALLIWIGIQLVRPGEDDPSVSQATALWRAVMAILWAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH LAMSLDNALATAAVAQSLPEDSRLVIVFVGLALGAPVIAFGSQLVLTLLERFPALVYAGA HHHHHHHHHHHHHHHHHCCCCCCEEHEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH AVLGWIAGELLLADPTVGGTLHQWLAVIPGISPAIVSTFTCIGAAILVPLLGRVMVHHNR HHHHHHHHHHHEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC AG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]