| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91783983
Identifier: 91783983
GI number: 91783983
Start: 2896665
End: 2897396
Strand: Reverse
Name: 91783983
Synonym: Bxe_A1825
Alternate gene names: NA
Gene position: 2897396-2896665 (Counterclockwise)
Preceding gene: 91783988
Following gene: 91783982
Centisome position: 59.18
GC content: 61.34
Gene sequence:
>732_bases ATGGCCGAACTATTGAATCGTGACGATTTCCGTAAGGCGCTTGAAGAAGCGATCAAGGGCAAGAGCGCCAACAAGGCGCC GTTCAGCATCGCGTGGGCGAGCGGCAAGCTCTCCCGTGGACATCTCGCCCGCTGGGCCGAGAACCACTATCACTATGTCG GCCCGTTCGCCGACTACCTGGCCTATCTCTACGCGCGCACGCCCGACCACATGACCGAGGCCAAGGATTTTCTGCTGGCC AACATGTATGAAGAAGAAATCGGCGGCGATCGTCATACCGACCTGCTGATCCGCTTTGCCGAAGCGTGCGGCACGACGCG TGAGCGCGTGATCAACCCCGACAACATGTCGCCGACCACACGCGGCCTGCAGGCCTGGTGCTATTCGGTGGCCATGCGGG AAGACCCGGTCGTCGCCGTTGCTGCGCTCGTGGTCGGTCTCGAGTCGCAAGTGCCGTCCATCTACCGCAAGCAGACGCCG ACGCTGCGCGAGAAGTACCAGTTCACGGACGAAGAGGTCGAATTCTTCGACCTGCACATCGTGTCGGACGAGATTCACGG CGAGCGCGGCTACCAGATCGTGCTCGAGAACGCGACTACGGTGGAACTCCAGCAGCGCTGTCTGAAGATCTGCGAGATCG GCGCCCAGATGCGCCTGCTCTACACAACGGCCCTTTATTACGACTACGTCGAGAAGGAAATCCCGCTGCCGGAACTCGGG CTCGCCGCCTGA
Upstream 100 bases:
>100_bases GTATTCTTGTATTTGCTTTATGCTATCTCCGCTGTCTGCTGTTCGGGCCACCGGCCACGCACCGCGGACGTCGTTCCCAC CAAGATCAGGAGCAGAGAAA
Downstream 100 bases:
>100_bases GTTCGTCGGGGCCGGGTGCTGCGGCCCGGTTGTTCTGTTGGTACGGTGGCAGCGAAACTGCCGCCGCGTAAAAGAGGATG TGTAATGAGCGAATCCGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Chlamydia protein associating with death domains; CADD [H]
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MAELLNRDDFRKALEEAIKGKSANKAPFSIAWASGKLSRGHLARWAENHYHYVGPFADYLAYLYARTPDHMTEAKDFLLA NMYEEEIGGDRHTDLLIRFAEACGTTRERVINPDNMSPTTRGLQAWCYSVAMREDPVVAVAALVVGLESQVPSIYRKQTP TLREKYQFTDEEVEFFDLHIVSDEIHGERGYQIVLENATTVELQQRCLKICEIGAQMRLLYTTALYYDYVEKEIPLPELG LAA
Sequences:
>Translated_243_residues MAELLNRDDFRKALEEAIKGKSANKAPFSIAWASGKLSRGHLARWAENHYHYVGPFADYLAYLYARTPDHMTEAKDFLLA NMYEEEIGGDRHTDLLIRFAEACGTTRERVINPDNMSPTTRGLQAWCYSVAMREDPVVAVAALVVGLESQVPSIYRKQTP TLREKYQFTDEEVEFFDLHIVSDEIHGERGYQIVLENATTVELQQRCLKICEIGAQMRLLYTTALYYDYVEKEIPLPELG LAA >Mature_242_residues AELLNRDDFRKALEEAIKGKSANKAPFSIAWASGKLSRGHLARWAENHYHYVGPFADYLAYLYARTPDHMTEAKDFLLAN MYEEEIGGDRHTDLLIRFAEACGTTRERVINPDNMSPTTRGLQAWCYSVAMREDPVVAVAALVVGLESQVPSIYRKQTPT LREKYQFTDEEVEFFDLHIVSDEIHGERGYQIVLENATTVELQQRCLKICEIGAQMRLLYTTALYYDYVEKEIPLPELGL AA
Specific function: Chlamydia specific toxin inducing apoptosis in mammalian cell lines [H]
COG id: COG5424
COG function: function code H; Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C
Gene ontology:
Cell location: Secreted. Note=Secreted into the host cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pqqC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016084 - InterPro: IPR004305 [H]
Pfam domain/function: PF03070 TENA_THI-4 [H]
EC number: NA
Molecular weight: Translated: 27733; Mature: 27602
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELLNRDDFRKALEEAIKGKSANKAPFSIAWASGKLSRGHLARWAENHYHYVGPFADYL CCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCEEECCHHHHH AYLYARTPDHMTEAKDFLLANMYEEEIGGDRHTDLLIRFAEACGTTRERVINPDNMSPTT HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCHH RGLQAWCYSVAMREDPVVAVAALVVGLESQVPSIYRKQTPTLREKYQFTDEEVEFFDLHI HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHCCCCCCEEEEEEEE VSDEIHGERGYQIVLENATTVELQQRCLKICEIGAQMRLLYTTALYYDYVEKEIPLPELG ECHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCC LAA CCC >Mature Secondary Structure AELLNRDDFRKALEEAIKGKSANKAPFSIAWASGKLSRGHLARWAENHYHYVGPFADYL CCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCEEECCHHHHH AYLYARTPDHMTEAKDFLLANMYEEEIGGDRHTDLLIRFAEACGTTRERVINPDNMSPTT HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCHH RGLQAWCYSVAMREDPVVAVAALVVGLESQVPSIYRKQTPTLREKYQFTDEEVEFFDLHI HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHCCCCCCEEEEEEEE VSDEIHGERGYQIVLENATTVELQQRCLKICEIGAQMRLLYTTALYYDYVEKEIPLPELG ECHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCC LAA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10684935 [H]