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The map label for this gene is tcp [H]

Identifier: 91783988

GI number: 91783988

Start: 2899859

End: 2901049

Strand: Reverse

Name: tcp [H]

Synonym: Bxe_A1820

Alternate gene names: 91783988

Gene position: 2901049-2899859 (Counterclockwise)

Preceding gene: 91783990

Following gene: 91783983

Centisome position: 59.26

GC content: 62.72

Gene sequence:

>1191_bases
ATGTTTGGCGATTTGAAAATCGGTTACCGGCTCGCGCTGTCGTATGGTCTGTTGTTCCTGCTGCTAGCAGGAATTATTGC
GCTGAGTCTCGTCCATATGGACACTCGAAGTCCCGGCTTCGCGCGCGAATGCGCGTCGCTTGTCGGGCTGGGCGTTCTCG
CGGCCGCCGTGTGCGTATTGTCCGTTGCCGTGCTGGCGCGAAGCGTCGACAAGCCGCTTGCCGACGCGATCTATATCGCG
GAGACCGTGGCATCGGGCGATCTGAGCAAGGAATTTCCAGCCGGGCAGCGTGGTGAATTCGGCCGGCTGCTTAACGCGCT
GGCCAACATGGAAGATACGCTGACAGACCTTGTCACCGGTATCAAGCGGTCGACCGATACGATCGCCATCGCATCCCAGC
AAATCAGTTCGGGAAACGGCGACCTGTCGCAACGCACTGAACGGCAGGCTGCCTCGTTGCAGGAGACGGCCGCAGGCATG
GACAGGATCACCGCAACCGTGCGTCAGAATGCGGAGCGCGCCCGCGCGGCGAACGCGCTCGCTACCGACGCATCGGCCGT
TGCGACGCATGGAGGCGCGGTGGTGGAACGGGTGGTGGGCAGCATGGAGTCGATCAGCGCCAGTTCGGGCAAGATCGTCA
GCATCATCGAGGTGATCGAGGGCATCGCATTTCAGACCAATATTCTGGCGCTCAACGCCGCGGTGGAGGCCGCCCGTGCG
GGTGAGCAGGGCAGAGGTTTTGCCGTCGTGGCAGGCGAGGTGCGCAGCCTCGCCCAGCGCAGCGCGACAGCGGCGAAGGA
GATCCGAGGGCTGATCGTCGATTCGGTCGATCACGTCGCGAGTGGATCGCGGCTCGTCAATGACGCCGGCGCCACGATGA
AGGAAATAATCCGCGCGGTGAGCGGAGTGGCGAGCTTGCTCGGCGAAATTTCCGTTGCGCTGGCGGAACAGAGCGTCGGC
GTCGAAGAGGTGAACCAGGCAGTCGCGCATATGGACTCGACTACGCAGCAGAACGCCGCGCTTGTCGAGGAAGCTGCGGC
AGCAGCGTCCTCTTTATCGGCTCAGGCTTCGCAACTTCAGCAGGCCGTCAACGAGTTCAGGCTGGAAGATGAAGCCACGA
ATCGCACCCGCGCCGCGACCCCGGAATCATTCACCTGGTCTGGCGGAGAGATCGATGCATTGCCGTGCTGA

Upstream 100 bases:

>100_bases
TGTCACGCATCGGCAAGCGTGCGGCGTCCAGGACAAGGGTCGACGGGACGAACTGAAAAAATCTCGTCGCTTTGCAGTCC
ATACAGTTTATGGAGACTCC

Downstream 100 bases:

>100_bases
AGTCGCAGCACGCGCAATTGACGGATCACCTCGCGAGAAATTACGCGGCAGCGCGGCAACGCGCGGGTCGAGCGGTCCGC
CGCATCACGGCGCACTCCGG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: Citrate chemoreceptor protein [H]

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MFGDLKIGYRLALSYGLLFLLLAGIIALSLVHMDTRSPGFARECASLVGLGVLAAAVCVLSVAVLARSVDKPLADAIYIA
ETVASGDLSKEFPAGQRGEFGRLLNALANMEDTLTDLVTGIKRSTDTIAIASQQISSGNGDLSQRTERQAASLQETAAGM
DRITATVRQNAERARAANALATDASAVATHGGAVVERVVGSMESISASSGKIVSIIEVIEGIAFQTNILALNAAVEAARA
GEQGRGFAVVAGEVRSLAQRSATAAKEIRGLIVDSVDHVASGSRLVNDAGATMKEIIRAVSGVASLLGEISVALAEQSVG
VEEVNQAVAHMDSTTQQNAALVEEAAAAASSLSAQASQLQQAVNEFRLEDEATNRTRAATPESFTWSGGEIDALPC

Sequences:

>Translated_396_residues
MFGDLKIGYRLALSYGLLFLLLAGIIALSLVHMDTRSPGFARECASLVGLGVLAAAVCVLSVAVLARSVDKPLADAIYIA
ETVASGDLSKEFPAGQRGEFGRLLNALANMEDTLTDLVTGIKRSTDTIAIASQQISSGNGDLSQRTERQAASLQETAAGM
DRITATVRQNAERARAANALATDASAVATHGGAVVERVVGSMESISASSGKIVSIIEVIEGIAFQTNILALNAAVEAARA
GEQGRGFAVVAGEVRSLAQRSATAAKEIRGLIVDSVDHVASGSRLVNDAGATMKEIIRAVSGVASLLGEISVALAEQSVG
VEEVNQAVAHMDSTTQQNAALVEEAAAAASSLSAQASQLQQAVNEFRLEDEATNRTRAATPESFTWSGGEIDALPC
>Mature_396_residues
MFGDLKIGYRLALSYGLLFLLLAGIIALSLVHMDTRSPGFARECASLVGLGVLAAAVCVLSVAVLARSVDKPLADAIYIA
ETVASGDLSKEFPAGQRGEFGRLLNALANMEDTLTDLVTGIKRSTDTIAIASQQISSGNGDLSQRTERQAASLQETAAGM
DRITATVRQNAERARAANALATDASAVATHGGAVVERVVGSMESISASSGKIVSIIEVIEGIAFQTNILALNAAVEAARA
GEQGRGFAVVAGEVRSLAQRSATAAKEIRGLIVDSVDHVASGSRLVNDAGATMKEIIRAVSGVASLLGEISVALAEQSVG
VEEVNQAVAHMDSTTQQNAALVEEAAAAASSLSAQASQLQQAVNEFRLEDEATNRTRAATPESFTWSGGEIDALPC

Specific function: Acts as a receptor for citrate and mediates taxis away from phenol. Also mediates an attractant response to metal-citrate complexes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=344, Percent_Identity=50.8720930232558, Blast_Score=283, Evalue=1e-77,
Organism=Escherichia coli, GI1788195, Length=297, Percent_Identity=56.2289562289562, Blast_Score=282, Evalue=3e-77,
Organism=Escherichia coli, GI1788194, Length=335, Percent_Identity=48.0597014925373, Blast_Score=273, Evalue=2e-74,
Organism=Escherichia coli, GI2367378, Length=332, Percent_Identity=52.4096385542169, Blast_Score=265, Evalue=4e-72,
Organism=Escherichia coli, GI1789453, Length=359, Percent_Identity=36.7688022284123, Blast_Score=205, Evalue=4e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 40865; Mature: 40865

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGDLKIGYRLALSYGLLFLLLAGIIALSLVHMDTRSPGFARECASLVGLGVLAAAVCVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
SVAVLARSVDKPLADAIYIAETVASGDLSKEFPAGQRGEFGRLLNALANMEDTLTDLVTG
HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHH
IKRSTDTIAIASQQISSGNGDLSQRTERQAASLQETAAGMDRITATVRQNAERARAANAL
HHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATDASAVATHGGAVVERVVGSMESISASSGKIVSIIEVIEGIAFQTNILALNAAVEAARA
HCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHC
GEQGRGFAVVAGEVRSLAQRSATAAKEIRGLIVDSVDHVASGSRLVNDAGATMKEIIRAV
CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHH
SGVASLLGEISVALAEQSVGVEEVNQAVAHMDSTTQQNAALVEEAAAAASSLSAQASQLQ
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QAVNEFRLEDEATNRTRAATPESFTWSGGEIDALPC
HHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFGDLKIGYRLALSYGLLFLLLAGIIALSLVHMDTRSPGFARECASLVGLGVLAAAVCVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
SVAVLARSVDKPLADAIYIAETVASGDLSKEFPAGQRGEFGRLLNALANMEDTLTDLVTG
HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHH
IKRSTDTIAIASQQISSGNGDLSQRTERQAASLQETAAGMDRITATVRQNAERARAANAL
HHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATDASAVATHGGAVVERVVGSMESISASSGKIVSIIEVIEGIAFQTNILALNAAVEAARA
HCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHC
GEQGRGFAVVAGEVRSLAQRSATAAKEIRGLIVDSVDHVASGSRLVNDAGATMKEIIRAV
CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHH
SGVASLLGEISVALAEQSVGVEEVNQAVAHMDSTTQQNAALVEEAAAAASSLSAQASQLQ
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QAVNEFRLEDEATNRTRAATPESFTWSGGEIDALPC
HHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8419927; 11677609 [H]