| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yghU [H]
Identifier: 91783975
GI number: 91783975
Start: 2887535
End: 2888410
Strand: Direct
Name: yghU [H]
Synonym: Bxe_A1834
Alternate gene names: 91783975
Gene position: 2887535-2888410 (Clockwise)
Preceding gene: 91783973
Following gene: 91783976
Centisome position: 58.98
GC content: 63.01
Gene sequence:
>876_bases ATGAGTGACCGCGCCGATTACGTGCCGCCGAAAGTATGGACCTGGAACAAGGAGAACGGCGGCCGCTTCGCGAACATCAA CCGCCCTGTCGCGGGGGCCACGCATGAGAAGGAACTGCCGGTCGGCCGCCATCCTCTGCAGCTCTACTCGCTGGCCACGC CGAACGGCGTGAAGGTCACGGTGATGCTCGAAGAACTGCTGGCGAGCGGCCACAGCGGCGCGGAATATGACGCGTGGCTG ATCAGGATCGGTGAAGGCGACCAGTTCGGCAGCGGCTTCGTGGCCGTGAATCCGAACTCCAAGATCCCCGCGCTGCTGGA TCGCAGCGGCCCCACGCCGATCCGGGTTTTCGAGTCCGGTGCGATTCTGCTGTATCTCGCCGAAAAGTTCGGCGCTTTTC TGCCGACCGAAGCCGGCGCGCGCGCCGAATGCCTGTCGTGGTTGTTCTGGCAGATGGGAAGCGCCCCGTATCTGGGCGGC GGCCTCGGCCATTTTTACGCATACGCGCCGACAAAAATCGAATATGCGATCGACCGTTTCGCGATGGAAGTAAAACGTCA GCTCGACGTGCTCGACAGGCGGCTCGCGGAAAACGAATACGTGGCGGGCAGCGAGTACACGATCGCCGACATGGCGATCT GGCCTTGGTACGGCGGCCTCGTCAAGGGCTGGCTCTACGAGGCGGGCGAATTCCTGTCGGTGCAGGACTACCGGCACGTT CAACGCTGGGCCAACGCGATCGGCGAACGTCCCGCGGTGCGTCGTGGACGCAAGGTCAACCGCGTGTCCGGCGAGCTTTC AGATCAATTGCACGAGCGTCACGACGCAAGCGACTTCGAGACGAGCACGCAGGACATATTGGCCGCGCAGAAGTAA
Upstream 100 bases:
>100_bases GGGCGCCGCTTCGGCCGGGAGCACCGCCAGCGCGTTCCGCGCCGATTTGTTAATCTCTCTGCGAAAACACTTGTCCCCCC CGGACACAAGGAGCCTGAGC
Downstream 100 bases:
>100_bases CGGGGGTTTTGGGTGATCTCGCAGGGCAATGGGCACGCGTGTGCGTGCCCGTCAGCGAAAGCCTCGGCGATGCACCGGCA CCCCGGGATACCGGCCGTTA
Product: putative glutathione S-transferase YghU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MSDRADYVPPKVWTWNKENGGRFANINRPVAGATHEKELPVGRHPLQLYSLATPNGVKVTVMLEELLASGHSGAEYDAWL IRIGEGDQFGSGFVAVNPNSKIPALLDRSGPTPIRVFESGAILLYLAEKFGAFLPTEAGARAECLSWLFWQMGSAPYLGG GLGHFYAYAPTKIEYAIDRFAMEVKRQLDVLDRRLAENEYVAGSEYTIADMAIWPWYGGLVKGWLYEAGEFLSVQDYRHV QRWANAIGERPAVRRGRKVNRVSGELSDQLHERHDASDFETSTQDILAAQK
Sequences:
>Translated_291_residues MSDRADYVPPKVWTWNKENGGRFANINRPVAGATHEKELPVGRHPLQLYSLATPNGVKVTVMLEELLASGHSGAEYDAWL IRIGEGDQFGSGFVAVNPNSKIPALLDRSGPTPIRVFESGAILLYLAEKFGAFLPTEAGARAECLSWLFWQMGSAPYLGG GLGHFYAYAPTKIEYAIDRFAMEVKRQLDVLDRRLAENEYVAGSEYTIADMAIWPWYGGLVKGWLYEAGEFLSVQDYRHV QRWANAIGERPAVRRGRKVNRVSGELSDQLHERHDASDFETSTQDILAAQK >Mature_290_residues SDRADYVPPKVWTWNKENGGRFANINRPVAGATHEKELPVGRHPLQLYSLATPNGVKVTVMLEELLASGHSGAEYDAWLI RIGEGDQFGSGFVAVNPNSKIPALLDRSGPTPIRVFESGAILLYLAEKFGAFLPTEAGARAECLSWLFWQMGSAPYLGGG LGHFYAYAPTKIEYAIDRFAMEVKRQLDVLDRRLAENEYVAGSEYTIADMAIWPWYGGLVKGWLYEAGEFLSVQDYRHVQ RWANAIGERPAVRRGRKVNRVSGELSDQLHERHDASDFETSTQDILAAQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI87082195, Length=285, Percent_Identity=70.8771929824561, Blast_Score=429, Evalue=1e-121, Organism=Escherichia coli, GI1788640, Length=228, Percent_Identity=41.2280701754386, Blast_Score=155, Evalue=2e-39, Organism=Escherichia coli, GI87081789, Length=182, Percent_Identity=30.2197802197802, Blast_Score=67, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324100, Length=253, Percent_Identity=28.8537549407115, Blast_Score=92, Evalue=1e-19, Organism=Drosophila melanogaster, GI28571670, Length=144, Percent_Identity=31.25, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI17864592, Length=201, Percent_Identity=28.8557213930348, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI17864594, Length=210, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 32463; Mature: 32332
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRADYVPPKVWTWNKENGGRFANINRPVAGATHEKELPVGRHPLQLYSLATPNGVKVT CCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEE VMLEELLASGHSGAEYDAWLIRIGEGDQFGSGFVAVNPNSKIPALLDRSGPTPIRVFESG EEHHHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCHHCCCCCCCCEEEECCC AILLYLAEKFGAFLPTEAGARAECLSWLFWQMGSAPYLGGGLGHFYAYAPTKIEYAIDRF EEEEEEEHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHEEECCCHHHHHHHHH AMEVKRQLDVLDRRLAENEYVAGSEYTIADMAIWPWYGGLVKGWLYEAGEFLSVQDYRHV HHHHHHHHHHHHHHHHCCCEECCCCEEEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHH QRWANAIGERPAVRRGRKVNRVSGELSDQLHERHDASDFETSTQDILAAQK HHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCC >Mature Secondary Structure SDRADYVPPKVWTWNKENGGRFANINRPVAGATHEKELPVGRHPLQLYSLATPNGVKVT CCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEE VMLEELLASGHSGAEYDAWLIRIGEGDQFGSGFVAVNPNSKIPALLDRSGPTPIRVFESG EEHHHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCHHCCCCCCCCEEEECCC AILLYLAEKFGAFLPTEAGARAECLSWLFWQMGSAPYLGGGLGHFYAYAPTKIEYAIDRF EEEEEEEHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHEEECCCHHHHHHHHH AMEVKRQLDVLDRRLAENEYVAGSEYTIADMAIWPWYGGLVKGWLYEAGEFLSVQDYRHV HHHHHHHHHHHHHHHHCCCEECCCCEEEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHH QRWANAIGERPAVRRGRKVNRVSGELSDQLHERHDASDFETSTQDILAAQK HHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]