| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is bcr [H]
Identifier: 91783976
GI number: 91783976
Start: 2888776
End: 2890038
Strand: Direct
Name: bcr [H]
Synonym: Bxe_A1832
Alternate gene names: 91783976
Gene position: 2888776-2890038 (Clockwise)
Preceding gene: 91783975
Following gene: 91783984
Centisome position: 59.0
GC content: 62.39
Gene sequence:
>1263_bases ATGAACCACACTATCACCGACTGTTCCACTTCTACCGCGCGCCCACCGAACTCGCCGCGCTTCCTGCTGTTCCTGATCTG CCTGTTCGCTTCGGCCGGACAACTCGCAATCGACATCTACGTACCCGCGCTACCCGCGATGGCGCATTTCTTTGCGACAT CCCCTCAGGCGATCCAGTCGAGCGTGTCCGGATACATGGTGGCCTATGCGCTCGGCCAACTCGTCTTCGGACCGGTGGCC GACGCTTATGGACGCAAACGCGTGCTGGCTTTCGGGCTCGTGATCTACACGCTTGGCTGCCTGCTGTCACTCGTCGCATC GAATCTGGAGACATTCGTTCTTGCCCGCTGTCTGCAAGGATTCGGCATCGCTACCACGAACCTGCTCGCGAAAGCGATCA TCACCGATTCGTTCGCCGGACAAGCGCTGGTGCATGCGTTCACCTATATGTCGATCGCGTGGGGACTCGCGCCGATCGTG GCGCCGGTGATCGGCGCGCATCTGCAAACGTGGTTTGGCTGGCAAGCCTGCCTCGTCTTTCTGCTGGTTTATTCGCTGGT GATGTGGGGACTGCTGTGGCGCTACCGCGAAACATTGGTGCAGCCGGTGCATCTCGCGCCGCGCACGCTGATGGCGAATG CGGGCAAGGTGCTGTCGAGCCCGGTGTTCCAGAGCTGCTTCCTCGCGCAAGGCCTGTGCTACAGCATCCTGCTCGTGTTC AACATCGTCGGGCCCTTCATGGTGCAGAACACGTTGCACAAACCGCCGACTTTTTTCGGCTACCTCGCGCTCGGCATCGG GGCCATGTACTTCCTCGGCGGGCTTTCGAATCGTGTGCACGGCGCACGTCTGCCGGATGCGGAACAGCGGCTGCGCATCG GCGCGCGCGTGATGGCGGCCGCGTCGATTGCGATGCTGGTTCTGGCGCTGACAGTCGGCCTGCGAGTGTGGACACTCGCG CTGCCCGTGCTGGTGATGGGGTTCTGCGCGGGTGCGATGTATCCGACTCTGATGGCCAAGGGAAATTCGCTGTTCCCGCA CATCGCGGGCCTGACGAGCGCGATCCTCGGGTGTGCGCTGCTGCTGGTCTCGTCGGCGATGATGGGACTGGCCGGCTTCG TATCGGTCCAGGAACTGACGTCGCTGGCGGTGTTTTTTGTGATCCTCGCCCTTACGGTCGTGGCGATGGTGACTAAGCTG CTACGCCATCTGGCGCAACCTCAGTCCGCAGCCGTGGCACGCGGGAGCGGCGAAGCGGTGTAA
Upstream 100 bases:
>100_bases CGCAGCGACCCCGTGCGCCCATGCTCCAGGTATCGCCGCCGCGACGGCCAGGACGATCGCGCCTGTTCCCGTCACCAGAA TCTGTTCCCTTTATGCTGTC
Downstream 100 bases:
>100_bases GTACGCTTCTGCTTCCGAATTCGCCGCACGTCAAAACGGAGTGTATGGAAACGACGTGCGGTCCTGAGTAACGAGGGCTC GTGAGGTTCCGCCAGACCGT
Product: major facilitator superfamily drug efflux protein
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: Sulfonamide resistance protein [H]
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MNHTITDCSTSTARPPNSPRFLLFLICLFASAGQLAIDIYVPALPAMAHFFATSPQAIQSSVSGYMVAYALGQLVFGPVA DAYGRKRVLAFGLVIYTLGCLLSLVASNLETFVLARCLQGFGIATTNLLAKAIITDSFAGQALVHAFTYMSIAWGLAPIV APVIGAHLQTWFGWQACLVFLLVYSLVMWGLLWRYRETLVQPVHLAPRTLMANAGKVLSSPVFQSCFLAQGLCYSILLVF NIVGPFMVQNTLHKPPTFFGYLALGIGAMYFLGGLSNRVHGARLPDAEQRLRIGARVMAAASIAMLVLALTVGLRVWTLA LPVLVMGFCAGAMYPTLMAKGNSLFPHIAGLTSAILGCALLLVSSAMMGLAGFVSVQELTSLAVFFVILALTVVAMVTKL LRHLAQPQSAAVARGSGEAV
Sequences:
>Translated_420_residues MNHTITDCSTSTARPPNSPRFLLFLICLFASAGQLAIDIYVPALPAMAHFFATSPQAIQSSVSGYMVAYALGQLVFGPVA DAYGRKRVLAFGLVIYTLGCLLSLVASNLETFVLARCLQGFGIATTNLLAKAIITDSFAGQALVHAFTYMSIAWGLAPIV APVIGAHLQTWFGWQACLVFLLVYSLVMWGLLWRYRETLVQPVHLAPRTLMANAGKVLSSPVFQSCFLAQGLCYSILLVF NIVGPFMVQNTLHKPPTFFGYLALGIGAMYFLGGLSNRVHGARLPDAEQRLRIGARVMAAASIAMLVLALTVGLRVWTLA LPVLVMGFCAGAMYPTLMAKGNSLFPHIAGLTSAILGCALLLVSSAMMGLAGFVSVQELTSLAVFFVILALTVVAMVTKL LRHLAQPQSAAVARGSGEAV >Mature_420_residues MNHTITDCSTSTARPPNSPRFLLFLICLFASAGQLAIDIYVPALPAMAHFFATSPQAIQSSVSGYMVAYALGQLVFGPVA DAYGRKRVLAFGLVIYTLGCLLSLVASNLETFVLARCLQGFGIATTNLLAKAIITDSFAGQALVHAFTYMSIAWGLAPIV APVIGAHLQTWFGWQACLVFLLVYSLVMWGLLWRYRETLVQPVHLAPRTLMANAGKVLSSPVFQSCFLAQGLCYSILLVF NIVGPFMVQNTLHKPPTFFGYLALGIGAMYFLGGLSNRVHGARLPDAEQRLRIGARVMAAASIAMLVLALTVGLRVWTLA LPVLVMGFCAGAMYPTLMAKGNSLFPHIAGLTSAILGCALLLVSSAMMGLAGFVSVQELTSLAVFFVILALTVVAMVTKL LRHLAQPQSAAVARGSGEAV
Specific function: Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance. Probable membrane translocase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Bcr/CmlA family [H]
Homologues:
Organism=Escherichia coli, GI1788509, Length=355, Percent_Identity=25.9154929577465, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI48994889, Length=345, Percent_Identity=27.536231884058, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI87082312, Length=360, Percent_Identity=26.6666666666667, Blast_Score=101, Evalue=7e-23, Organism=Escherichia coli, GI1790195, Length=155, Percent_Identity=29.6774193548387, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1787065, Length=157, Percent_Identity=28.0254777070064, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI1790146, Length=240, Percent_Identity=26.25, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004812 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004734 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 44767; Mature: 44767
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHTITDCSTSTARPPNSPRFLLFLICLFASAGQLAIDIYVPALPAMAHFFATSPQAIQS CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCCHHHHHH SVSGYMVAYALGQLVFGPVADAYGRKRVLAFGLVIYTLGCLLSLVASNLETFVLARCLQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC FGIATTNLLAKAIITDSFAGQALVHAFTYMSIAWGLAPIVAPVIGAHLQTWFGWQACLVF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLVYSLVMWGLLWRYRETLVQPVHLAPRTLMANAGKVLSSPVFQSCFLAQGLCYSILLVF HHHHHHHHHHHHHHHHHHHHCHHHHCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH NIVGPFMVQNTLHKPPTFFGYLALGIGAMYFLGGLSNRVHGARLPDAEQRLRIGARVMAA HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH ASIAMLVLALTVGLRVWTLALPVLVMGFCAGAMYPTLMAKGNSLFPHIAGLTSAILGCAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LLVSSAMMGLAGFVSVQELTSLAVFFVILALTVVAMVTKLLRHLAQPQSAAVARGSGEAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCC >Mature Secondary Structure MNHTITDCSTSTARPPNSPRFLLFLICLFASAGQLAIDIYVPALPAMAHFFATSPQAIQS CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCCHHHHHH SVSGYMVAYALGQLVFGPVADAYGRKRVLAFGLVIYTLGCLLSLVASNLETFVLARCLQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC FGIATTNLLAKAIITDSFAGQALVHAFTYMSIAWGLAPIVAPVIGAHLQTWFGWQACLVF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLVYSLVMWGLLWRYRETLVQPVHLAPRTLMANAGKVLSSPVFQSCFLAQGLCYSILLVF HHHHHHHHHHHHHHHHHHHHCHHHHCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH NIVGPFMVQNTLHKPPTFFGYLALGIGAMYFLGGLSNRVHGARLPDAEQRLRIGARVMAA HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH ASIAMLVLALTVGLRVWTLALPVLVMGFCAGAMYPTLMAKGNSLFPHIAGLTSAILGCAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LLVSSAMMGLAGFVSVQELTSLAVFFVILALTVVAMVTKLLRHLAQPQSAAVARGSGEAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8486276; 9278503; 2694948 [H]