| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is adhA [H]
Identifier: 91783940
GI number: 91783940
Start: 2852864
End: 2853889
Strand: Direct
Name: adhA [H]
Synonym: Bxe_A1872
Alternate gene names: 91783940
Gene position: 2852864-2853889 (Clockwise)
Preceding gene: 91783937
Following gene: 91783944
Centisome position: 58.27
GC content: 63.65
Gene sequence:
>1026_bases ATGGCCCAACTAATGAAAGCTGCTGTCGTTCACGAATTCGGCGCTCCGCTGCGTATCGAAGAGGTTCCCGTCCCGCAGGT GGGGCGCGGCCAGATTCTGGTGAACATCAAGGCGTCCGGCGTCTGTCACACGGACCTGCACGCGGCCGACGGCGACTGGC CGGTCAAGCCCACCCTGCCCTTCATTCCCGGTCACGAAGGCGTGGGCTATGTCGCTGCCGTCGGCGAAGGTGTCAAGCAT GTCAAGGAAGGCGATCGCGTCGGCGTGCCGTGGCTTTATACCGCCTGCGGTCACTGCGAGCATTGCCTGGGCGGTTGGGA AACGCTGTGCCAGGAACAGCAGAATACGGGCTACTCGGTCAACGGCGCTTACGCCGAATACGTGGTGGCCGACCCGAACT TCGTCGGTCATCTGCCCGCGGCCGTCTCGTTCGAAGATATCGCCCCGATTCTGTGCGCGGGCGTGACGGTGTACAAAGGC ATCCGCATGACGGACGCGCGGCCGGGTCAATGGATCACGATTTCGGGGATCGGCGGCCTCGGCCATGTCGCGGTTCAATA TGCCATTGCGATGGGCCTGCGCGTGGTGGCCGTCGATATCTCGGAGGACAAGCTGGCTCTTGCCCGCGAACTCGGCGCAA CGCTTGCGTTCAACGCTTCGGAGTGCGACCCCGCGGCGGCGATCCAGAAGGAAATCGGCGGAACGCACGGCGTGCTCGTC ACCGCCGTATCGCGCAGCGCCTTCGCTCAGGCGCTGGGCATGGTGCGCCGCGGCGGCACCGTTGCGCTGAACGGTCTGCC GCCGGGCGACTTTCCGCTGCCGATCTTCTCGACCGTGCTCAACGGCATTACCGTGCGCGGCTCCATTGTCGGCACGCGCC AGGACTTGCAGGAATCACTCGAATTCGCCGCACAGGGCCGTGTGCGTGCCCGAATCCATCTCGACCGGCTGGACAATATC AACCATGTTCTCGCCGAATTGAAGAGCGGGAAAGTGGATGGACGCATCGTTCTGAATCTCGATTGA
Upstream 100 bases:
>100_bases AATGAAGAAGCGCGCATGGGTCCTGGATGACCCAGGTCAACCGCCCCGTATCGGTGAAGGAGATACTGGTCGCCACGTCA TCAACGTCCGGAGAAAAGTT
Downstream 100 bases:
>100_bases GCAAGCGGGCGAGCGGCAGAGTCGACGAAAGAGAAAGCGGCGCGAGCGCCTGAGCGGCTCGCGCCTTTTTCGTTTGAGGC CTCTTCCCATGACGTTCTGG
Product: zinc-containing alcohol dehydrogenase superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MAQLMKAAVVHEFGAPLRIEEVPVPQVGRGQILVNIKASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVAAVGEGVKH VKEGDRVGVPWLYTACGHCEHCLGGWETLCQEQQNTGYSVNGAYAEYVVADPNFVGHLPAAVSFEDIAPILCAGVTVYKG IRMTDARPGQWITISGIGGLGHVAVQYAIAMGLRVVAVDISEDKLALARELGATLAFNASECDPAAAIQKEIGGTHGVLV TAVSRSAFAQALGMVRRGGTVALNGLPPGDFPLPIFSTVLNGITVRGSIVGTRQDLQESLEFAAQGRVRARIHLDRLDNI NHVLAELKSGKVDGRIVLNLD
Sequences:
>Translated_341_residues MAQLMKAAVVHEFGAPLRIEEVPVPQVGRGQILVNIKASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVAAVGEGVKH VKEGDRVGVPWLYTACGHCEHCLGGWETLCQEQQNTGYSVNGAYAEYVVADPNFVGHLPAAVSFEDIAPILCAGVTVYKG IRMTDARPGQWITISGIGGLGHVAVQYAIAMGLRVVAVDISEDKLALARELGATLAFNASECDPAAAIQKEIGGTHGVLV TAVSRSAFAQALGMVRRGGTVALNGLPPGDFPLPIFSTVLNGITVRGSIVGTRQDLQESLEFAAQGRVRARIHLDRLDNI NHVLAELKSGKVDGRIVLNLD >Mature_340_residues AQLMKAAVVHEFGAPLRIEEVPVPQVGRGQILVNIKASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVAAVGEGVKHV KEGDRVGVPWLYTACGHCEHCLGGWETLCQEQQNTGYSVNGAYAEYVVADPNFVGHLPAAVSFEDIAPILCAGVTVYKGI RMTDARPGQWITISGIGGLGHVAVQYAIAMGLRVVAVDISEDKLALARELGATLAFNASECDPAAAIQKEIGGTHGVLVT AVSRSAFAQALGMVRRGGTVALNGLPPGDFPLPIFSTVLNGITVRGSIVGTRQDLQESLEFAAQGRVRARIHLDRLDNIN HVLAELKSGKVDGRIVLNLD
Specific function: Preferred Specificity Is Towards 1-Propanol. [C]
COG id: COG1064
COG function: function code R; Zn-dependent alcohol dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4501933, Length=361, Percent_Identity=30.7479224376731, Blast_Score=125, Evalue=4e-29, Organism=Homo sapiens, GI34577061, Length=347, Percent_Identity=31.4121037463977, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI4501929, Length=347, Percent_Identity=31.4121037463977, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI71565154, Length=239, Percent_Identity=32.2175732217573, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI156523966, Length=369, Percent_Identity=27.3712737127371, Blast_Score=105, Evalue=6e-23, Organism=Homo sapiens, GI4501939, Length=362, Percent_Identity=27.3480662983425, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI71743840, Length=350, Percent_Identity=28.2857142857143, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI262073058, Length=350, Percent_Identity=28.2857142857143, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI71565152, Length=367, Percent_Identity=26.9754768392371, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI194239674, Length=271, Percent_Identity=27.3062730627306, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI13236495, Length=271, Percent_Identity=27.3062730627306, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI194239676, Length=228, Percent_Identity=28.9473684210526, Blast_Score=83, Evalue=4e-16, Organism=Escherichia coli, GI87081918, Length=337, Percent_Identity=43.9169139465875, Blast_Score=252, Evalue=3e-68, Organism=Escherichia coli, GI1786518, Length=345, Percent_Identity=32.1739130434783, Blast_Score=149, Evalue=3e-37, Organism=Escherichia coli, GI1790045, Length=335, Percent_Identity=30.1492537313433, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI87082401, Length=341, Percent_Identity=29.3255131964809, Blast_Score=129, Evalue=3e-31, Organism=Escherichia coli, GI87082125, Length=204, Percent_Identity=35.7843137254902, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1788073, Length=269, Percent_Identity=33.0855018587361, Blast_Score=115, Evalue=5e-27, Organism=Escherichia coli, GI1788407, Length=217, Percent_Identity=34.1013824884793, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1788075, Length=275, Percent_Identity=32, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1786552, Length=243, Percent_Identity=35.8024691358025, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI226510992, Length=299, Percent_Identity=28.0936454849498, Blast_Score=89, Evalue=6e-19, Organism=Escherichia coli, GI1790485, Length=292, Percent_Identity=28.4246575342466, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1787863, Length=281, Percent_Identity=27.7580071174377, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1786825, Length=304, Percent_Identity=26.6447368421053, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1790718, Length=318, Percent_Identity=22.9559748427673, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17562584, Length=339, Percent_Identity=39.5280235988201, Blast_Score=223, Evalue=1e-58, Organism=Caenorhabditis elegans, GI71988145, Length=340, Percent_Identity=34.1176470588235, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17562582, Length=340, Percent_Identity=38.8235294117647, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17562876, Length=318, Percent_Identity=31.4465408805031, Blast_Score=121, Evalue=4e-28, Organism=Caenorhabditis elegans, GI17562878, Length=225, Percent_Identity=36.4444444444444, Blast_Score=111, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17507255, Length=265, Percent_Identity=30.5660377358491, Blast_Score=98, Evalue=6e-21, Organism=Caenorhabditis elegans, GI25146526, Length=237, Percent_Identity=32.0675105485232, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI71997431, Length=239, Percent_Identity=31.7991631799163, Blast_Score=88, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17565904, Length=210, Percent_Identity=30.4761904761905, Blast_Score=75, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6319621, Length=342, Percent_Identity=40.0584795321637, Blast_Score=258, Evalue=8e-70, Organism=Saccharomyces cerevisiae, GI6323961, Length=343, Percent_Identity=39.3586005830904, Blast_Score=249, Evalue=4e-67, Organism=Saccharomyces cerevisiae, GI6323729, Length=343, Percent_Identity=38.1924198250729, Blast_Score=248, Evalue=9e-67, Organism=Saccharomyces cerevisiae, GI6324486, Length=341, Percent_Identity=39.0029325513196, Blast_Score=247, Evalue=2e-66, Organism=Saccharomyces cerevisiae, GI6319949, Length=349, Percent_Identity=27.5071633237822, Blast_Score=102, Evalue=8e-23, Organism=Saccharomyces cerevisiae, GI6322619, Length=330, Percent_Identity=28.1818181818182, Blast_Score=100, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6319955, Length=330, Percent_Identity=28.1818181818182, Blast_Score=100, Evalue=4e-22, Organism=Saccharomyces cerevisiae, GI6320033, Length=242, Percent_Identity=31.8181818181818, Blast_Score=89, Evalue=9e-19, Organism=Saccharomyces cerevisiae, GI6323099, Length=322, Percent_Identity=25.776397515528, Blast_Score=87, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6323980, Length=306, Percent_Identity=25.8169934640523, Blast_Score=83, Evalue=7e-17, Organism=Drosophila melanogaster, GI17137530, Length=328, Percent_Identity=28.9634146341463, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI17737897, Length=310, Percent_Identity=28.0645161290323, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI17737895, Length=248, Percent_Identity=28.6290322580645, Blast_Score=87, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.1 [H]
Molecular weight: Translated: 36011; Mature: 35880
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQLMKAAVVHEFGAPLRIEEVPVPQVGRGQILVNIKASGVCHTDLHAADGDWPVKPTLP CHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCCC FIPGHEGVGYVAAVGEGVKHVKEGDRVGVPWLYTACGHCEHCLGGWETLCQEQQNTGYSV CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCEE NGAYAEYVVADPNFVGHLPAAVSFEDIAPILCAGVTVYKGIRMTDARPGQWITISGIGGL CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEECCCCCCCEEEEECCCCH GHVAVQYAIAMGLRVVAVDISEDKLALARELGATLAFNASECDPAAAIQKEIGGTHGVLV HHHHHHHHHHHCEEEEEEECCCCHHHHHHHHCCEEEECCCCCCHHHHHHHHHCCCCCEEE TAVSRSAFAQALGMVRRGGTVALNGLPPGDFPLPIFSTVLNGITVRGSIVGTRQDLQESL EEHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHCCEEEEEEEECCHHHHHHHH EFAAQGRVRARIHLDRLDNINHVLAELKSGKVDGRIVLNLD HHHHCCCEEEEEEECHHCCHHHHHHHHHCCCCCCEEEEEEC >Mature Secondary Structure AQLMKAAVVHEFGAPLRIEEVPVPQVGRGQILVNIKASGVCHTDLHAADGDWPVKPTLP HHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCCC FIPGHEGVGYVAAVGEGVKHVKEGDRVGVPWLYTACGHCEHCLGGWETLCQEQQNTGYSV CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCEE NGAYAEYVVADPNFVGHLPAAVSFEDIAPILCAGVTVYKGIRMTDARPGQWITISGIGGL CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEECCCCCCCEEEEECCCCH GHVAVQYAIAMGLRVVAVDISEDKLALARELGATLAFNASECDPAAAIQKEIGGTHGVLV HHHHHHHHHHHCEEEEEEECCCCHHHHHHHHCCEEEECCCCCCHHHHHHHHHCCCCCEEE TAVSRSAFAQALGMVRRGGTVALNGLPPGDFPLPIFSTVLNGITVRGSIVGTRQDLQESL EEHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHCCEEEEEEEECCHHHHHHHH EFAAQGRVRARIHLDRLDNINHVLAELKSGKVDGRIVLNLD HHHHCCCEEEEEEECHHCCHHHHHHHHHCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9659380; 11481432 [H]