Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is 91783944

Identifier: 91783944

GI number: 91783944

Start: 2856027

End: 2857676

Strand: Direct

Name: 91783944

Synonym: Bxe_A1868

Alternate gene names: NA

Gene position: 2856027-2857676 (Clockwise)

Preceding gene: 91783940

Following gene: 91783947

Centisome position: 58.34

GC content: 66.12

Gene sequence:

>1650_bases
ATGCCTGCTCACTTTTCACCGGCACATCAGCGTCCAGTTCACAGACGGCAACGCGAACGGCTGGCGCAGCGAGGCTGGCG
CGCGCTCGACCGCGCGATGCAGAGGCCGTCGACATATCGTCACCCCGCGGGCCGCATTCGCCGCATCGAAACGCACATCT
CGGTCGTGTACCTGGCCGGCCGGTATGCGTACAAGCTGAAGAAGCGCGTCAATCCCGGTTTCGTGGACTTCACGCAGGCA
CGCGCGCGCGAACGCGCGTGCGCCGACGAGTTCCGGCTGAACCGCCGGCTCGCCCGTGAGATTTATCGCGGCGTCGTATC
GATTACGCGCCGCGGGGGCTCGTACCGTGTCGCGACAACGGGCGAGGTCGCCGAGCACGCCGTCCTGATGCGACGCTTCG
ACGAGCAGGAAATTTTCAAGGCATTGCAGGCGCGCGGCGAACTCGGTTTCGCGGAAATGGACGCCCTCGCCGGACAACTT
GCGGCGTTCCACCGCCGTTCCTCACGCACGCCGCCTCGCGCGGTCTTCGGCTCCGCAGCGTTTGTTCAGGAACAGATGCA
GACCGTGGTGGAAGCACTCCGCCGTGAAACCGGAGCGCGCCTGCCTGCCCGGATTTCCGCCTGGTGCGGGAGCGAAGGCC
AACGCCTTGCCGGGCACTTCGCCGCGCGTCACGCAGGCGGCTTTGTGCGCGAGAGCCACGGCGACCTGCACCTCGATAAC
ATCGTTCGGTGCGGCAAGCGCGTGCTCATGTTCGACTGCATCGAATTCGACGACGCCTTGCGCTGGATCGACATCGCCAG
CGACCTGAGCTTTCCGTTGATGGATCTGCACGCGTGTGGCCGGCAAGATCTCGCGGCGCGCCTGTTGAACGGCTGGCTGC
AACGTACAGGCGATTTTGCGGCGCTGCCGGTGCTGCGTTACTACATGGTCTACCGCGCATTGGTGCGCGCCCTCGTGGCA
GTGTTGAAAACACGCGATCAGCCGCCTGATGAGGGCCTCGCGCGCGCCATGCCGTACCTGAATCTGGTCGAGCGCATGAT
CGCGCCGCAGCGGCCGTACTTGCTGCTATGCCACGGCTACTCCGGATCGGGCAAGTCAGTGGCGAGCGAAGCGCTGGTGA
GCCTGGTCGGCGCCGTGCGTCTGTCGAGCGATATCGAGCGCAAGCGCGGCCGCCCCTTCGCGCCTATCGATTCCCGTCCG
CTGCCGGCCGAAGCCTACACGCACGACTCGATCGACCGGCATTACGATCTGCTGCTGCAATTGGCGCAACAGGTGCTGCT
GGCCGGCTACCCTGCGCTGGTCGACGCGACCTTTCTCAAGAGCGCGCATCGCGCCCGCTTCGCCGCGCTCGCACGCTCGC
ACGGCGTGCCGGTTTTTCTGCTCGATTTCCATGCGCGGGTACGTCAACTCGAACAGCGCGTGCAGGCGCGCGCCGCCGCT
TCCCATACGGAATCGGACGCCGGCCCGCTCGTGCTGATCCGGCAACTGGCGAACGAGGAACCGCTCTCCGCGGAAGAAAT
GCAGCGAACGGTGAGCTTCGATACGGAAGTGCCGCTCGCCGATTTCGGCCGTCTGGACTACTGGCGAAAACTGCTGCGGC
GGCTTTGCGAGCCGGAAGCGGCAGCGCCGCCGGAGGTGGCGAGCGGCTAG

Upstream 100 bases:

>100_bases
ACATCGCAGCCCAGGACGTCCGCAAGCATGATGTCGGTCAAGTCGCCGCGATGGTCCGCATCTATTCTGAAAGAACCCTT
GATGCCCGACGGAGAGTTCC

Downstream 100 bases:

>100_bases
CGCGAGGCATCTGTCAGGCAAGCTCCAACGCGAGTTCGATCAGCAGGGCCGCGTAACGAGCTGGAACAACGGCGCACGCA
AGATCAAGGGCTACACACCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 549; Mature: 548

Protein sequence:

>549_residues
MPAHFSPAHQRPVHRRQRERLAQRGWRALDRAMQRPSTYRHPAGRIRRIETHISVVYLAGRYAYKLKKRVNPGFVDFTQA
RARERACADEFRLNRRLAREIYRGVVSITRRGGSYRVATTGEVAEHAVLMRRFDEQEIFKALQARGELGFAEMDALAGQL
AAFHRRSSRTPPRAVFGSAAFVQEQMQTVVEALRRETGARLPARISAWCGSEGQRLAGHFAARHAGGFVRESHGDLHLDN
IVRCGKRVLMFDCIEFDDALRWIDIASDLSFPLMDLHACGRQDLAARLLNGWLQRTGDFAALPVLRYYMVYRALVRALVA
VLKTRDQPPDEGLARAMPYLNLVERMIAPQRPYLLLCHGYSGSGKSVASEALVSLVGAVRLSSDIERKRGRPFAPIDSRP
LPAEAYTHDSIDRHYDLLLQLAQQVLLAGYPALVDATFLKSAHRARFAALARSHGVPVFLLDFHARVRQLEQRVQARAAA
SHTESDAGPLVLIRQLANEEPLSAEEMQRTVSFDTEVPLADFGRLDYWRKLLRRLCEPEAAAPPEVASG

Sequences:

>Translated_549_residues
MPAHFSPAHQRPVHRRQRERLAQRGWRALDRAMQRPSTYRHPAGRIRRIETHISVVYLAGRYAYKLKKRVNPGFVDFTQA
RARERACADEFRLNRRLAREIYRGVVSITRRGGSYRVATTGEVAEHAVLMRRFDEQEIFKALQARGELGFAEMDALAGQL
AAFHRRSSRTPPRAVFGSAAFVQEQMQTVVEALRRETGARLPARISAWCGSEGQRLAGHFAARHAGGFVRESHGDLHLDN
IVRCGKRVLMFDCIEFDDALRWIDIASDLSFPLMDLHACGRQDLAARLLNGWLQRTGDFAALPVLRYYMVYRALVRALVA
VLKTRDQPPDEGLARAMPYLNLVERMIAPQRPYLLLCHGYSGSGKSVASEALVSLVGAVRLSSDIERKRGRPFAPIDSRP
LPAEAYTHDSIDRHYDLLLQLAQQVLLAGYPALVDATFLKSAHRARFAALARSHGVPVFLLDFHARVRQLEQRVQARAAA
SHTESDAGPLVLIRQLANEEPLSAEEMQRTVSFDTEVPLADFGRLDYWRKLLRRLCEPEAAAPPEVASG
>Mature_548_residues
PAHFSPAHQRPVHRRQRERLAQRGWRALDRAMQRPSTYRHPAGRIRRIETHISVVYLAGRYAYKLKKRVNPGFVDFTQAR
ARERACADEFRLNRRLAREIYRGVVSITRRGGSYRVATTGEVAEHAVLMRRFDEQEIFKALQARGELGFAEMDALAGQLA
AFHRRSSRTPPRAVFGSAAFVQEQMQTVVEALRRETGARLPARISAWCGSEGQRLAGHFAARHAGGFVRESHGDLHLDNI
VRCGKRVLMFDCIEFDDALRWIDIASDLSFPLMDLHACGRQDLAARLLNGWLQRTGDFAALPVLRYYMVYRALVRALVAV
LKTRDQPPDEGLARAMPYLNLVERMIAPQRPYLLLCHGYSGSGKSVASEALVSLVGAVRLSSDIERKRGRPFAPIDSRPL
PAEAYTHDSIDRHYDLLLQLAQQVLLAGYPALVDATFLKSAHRARFAALARSHGVPVFLLDFHARVRQLEQRVQARAAAS
HTESDAGPLVLIRQLANEEPLSAEEMQRTVSFDTEVPLADFGRLDYWRKLLRRLCEPEAAAPPEVASG

Specific function: Some isolated peptides of this protein are able to bind to human U937 monocytoblastic and A549 epithelial cell lines [H]

COG id: COG2187

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted, cell wall [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011009
- InterPro:   IPR010488 [H]

Pfam domain/function: PF06414 Zeta_toxin [H]

EC number: NA

Molecular weight: Translated: 61872; Mature: 61741

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAHFSPAHQRPVHRRQRERLAQRGWRALDRAMQRPSTYRHPAGRIRRIETHISVVYLAG
CCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
RYAYKLKKRVNPGFVDFTQARARERACADEFRLNRRLAREIYRGVVSITRRGGSYRVATT
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
GEVAEHAVLMRRFDEQEIFKALQARGELGFAEMDALAGQLAAFHRRSSRTPPRAVFGSAA
HHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
FVQEQMQTVVEALRRETGARLPARISAWCGSEGQRLAGHFAARHAGGFVRESHGDLHLDN
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHH
IVRCGKRVLMFDCIEFDDALRWIDIASDLSFPLMDLHACGRQDLAARLLNGWLQRTGDFA
HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCHH
ALPVLRYYMVYRALVRALVAVLKTRDQPPDEGLARAMPYLNLVERMIAPQRPYLLLCHGY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
SGSGKSVASEALVSLVGAVRLSSDIERKRGRPFAPIDSRPLPAEAYTHDSIDRHYDLLLQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHH
LAQQVLLAGYPALVDATFLKSAHRARFAALARSHGVPVFLLDFHARVRQLEQRVQARAAA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHH
SHTESDAGPLVLIRQLANEEPLSAEEMQRTVSFDTEVPLADFGRLDYWRKLLRRLCEPEA
HCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHCCCCC
AAPPEVASG
CCCCCCCCC
>Mature Secondary Structure 
PAHFSPAHQRPVHRRQRERLAQRGWRALDRAMQRPSTYRHPAGRIRRIETHISVVYLAG
CCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
RYAYKLKKRVNPGFVDFTQARARERACADEFRLNRRLAREIYRGVVSITRRGGSYRVATT
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
GEVAEHAVLMRRFDEQEIFKALQARGELGFAEMDALAGQLAAFHRRSSRTPPRAVFGSAA
HHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
FVQEQMQTVVEALRRETGARLPARISAWCGSEGQRLAGHFAARHAGGFVRESHGDLHLDN
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHH
IVRCGKRVLMFDCIEFDDALRWIDIASDLSFPLMDLHACGRQDLAARLLNGWLQRTGDFA
HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCHH
ALPVLRYYMVYRALVRALVAVLKTRDQPPDEGLARAMPYLNLVERMIAPQRPYLLLCHGY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
SGSGKSVASEALVSLVGAVRLSSDIERKRGRPFAPIDSRPLPAEAYTHDSIDRHYDLLLQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHH
LAQQVLLAGYPALVDATFLKSAHRARFAALARSHGVPVFLLDFHARVRQLEQRVQARAAA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHH
SHTESDAGPLVLIRQLANEEPLSAEEMQRTVSFDTEVPLADFGRLDYWRKLLRRLCEPEA
HCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHCCCCC
AAPPEVASG
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]