| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is arcA [H]
Identifier: 91783935
GI number: 91783935
Start: 2848033
End: 2849250
Strand: Direct
Name: arcA [H]
Synonym: Bxe_A1877
Alternate gene names: 91783935
Gene position: 2848033-2849250 (Clockwise)
Preceding gene: 91783934
Following gene: 91783936
Centisome position: 58.17
GC content: 66.91
Gene sequence:
>1218_bases ATGACATTCGGCGTCTATTCCGAAATAGGCACGCTGCGCAAGGTCATGGTCTGCCGCCCGGGACTTGCCCAGGCGCGCCT GACACCGGCCAATTGCCGCGACCTGCTGTTCGATGACGTGCTGTGGGTATCGCAGGCAAAGAACGACCATTACGCATTCG TCAGCACGATGCAGGAGCACGGCGTCGACGTGCTGGAAATGCACGATCTGCTGGCCGACATCCTGCAAGGCCGCGAGGCG CGCGACTGGGTGCTCGAACACAAGCTTGCGCCCGGCACCGTGGATGCGGAACTGGCGGCGCAACTCAGGCCCTGGCTCCA GGAGATGGAGCCGGGCGAACTCGCCACACGCCTGATCGGCGGGATCGTTCGCGCCGAATTGCCGTTCGAGGCCGACGGCC TGCTCGCGCAATGCACGCCGCCCTCGGGATTCATTCTGCCGCCGCTGCCCAACACGCTCTTCACGCGCGACAGCAGTTGC TGGATCAACGACGGCGTCGTGCTCGGATCGATGTACTGGCCGGCACGGCGACAGGAGACGCTGCTCGCCACCGCCATCTA CCGCTTCCATCCGCTGTTCAGCAGCGGAACACGCGTGTGGTGGGGCGGCCCGGAAACGGACCACGGCGGCGCGACGCTCG AAGGCGGCGATGTCATGCCGCTGTCGCGTGACGTCGTGCTGATCGGCATGGGCGAGCGCAGTTCGCCGCAAGGCGTCGCG CAGCTCGCGCGGGCCCTGTTCGCCGGCGAATCGGTCAAGCAGGTGATTGCTGCGCAGTTGCCGCGCTCGCGCGGCGCGAT GCACCTCGACACGGTGTTCACCTTCTGCGATCGCGACCTGGTCACGATCTTCCCCGAGGTGGTGGATGCCATCCGTTGCA CGAGTTTGCGCCCCGGCAAGCAGCCCGGTCAGCTCGACGTGCGGGCCGAAAGCGCGCCGTTTCTGGACGTGGTCGCGCAG GCGCTGGGTATCGGGACGCTGCGCACCGTCGCCACCGGCGGCGATACGTGGGAATCCGAGCGCGAGCAATGGGACGACGG CAACAACGTGATCGCGCTCGCGCCGGGCATCGTCGTGGCCTACAACCGCAATGTGTACACCAACACGCTTCTGCGCAAGG CAGGCGTGGAAGTCATTACGATCCCGAGCGGCGAACTGGGCCGCGGGCGCGGCGGCGGCCATTGCATGACCTGCCCGATC GAACGCGCCCCCCTCTGA
Upstream 100 bases:
>100_bases GTGATCCTCGCGGCTCTGCTCATCCTCGCCGCCGTGGCGGCATGGCTGCTTTCCACCGGCGCGCTCGGTTTGTAAGCCGC CGCTCTTCAGGAGAAACTCA
Downstream 100 bases:
>100_bases CGCGAAGCGCGCGTCGCACCTTTGGAGAATCCGCTCATGGCTTTCAATCTACGCAATCGCAGTCTGCTCAACATGCAGGA CTTCGCGCCGCGCGACATCC
Product: arginine deiminase
Products: NA
Alternate protein names: ADI; Arginine dihydrolase; AD [H]
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MTFGVYSEIGTLRKVMVCRPGLAQARLTPANCRDLLFDDVLWVSQAKNDHYAFVSTMQEHGVDVLEMHDLLADILQGREA RDWVLEHKLAPGTVDAELAAQLRPWLQEMEPGELATRLIGGIVRAELPFEADGLLAQCTPPSGFILPPLPNTLFTRDSSC WINDGVVLGSMYWPARRQETLLATAIYRFHPLFSSGTRVWWGGPETDHGGATLEGGDVMPLSRDVVLIGMGERSSPQGVA QLARALFAGESVKQVIAAQLPRSRGAMHLDTVFTFCDRDLVTIFPEVVDAIRCTSLRPGKQPGQLDVRAESAPFLDVVAQ ALGIGTLRTVATGGDTWESEREQWDDGNNVIALAPGIVVAYNRNVYTNTLLRKAGVEVITIPSGELGRGRGGGHCMTCPI ERAPL
Sequences:
>Translated_405_residues MTFGVYSEIGTLRKVMVCRPGLAQARLTPANCRDLLFDDVLWVSQAKNDHYAFVSTMQEHGVDVLEMHDLLADILQGREA RDWVLEHKLAPGTVDAELAAQLRPWLQEMEPGELATRLIGGIVRAELPFEADGLLAQCTPPSGFILPPLPNTLFTRDSSC WINDGVVLGSMYWPARRQETLLATAIYRFHPLFSSGTRVWWGGPETDHGGATLEGGDVMPLSRDVVLIGMGERSSPQGVA QLARALFAGESVKQVIAAQLPRSRGAMHLDTVFTFCDRDLVTIFPEVVDAIRCTSLRPGKQPGQLDVRAESAPFLDVVAQ ALGIGTLRTVATGGDTWESEREQWDDGNNVIALAPGIVVAYNRNVYTNTLLRKAGVEVITIPSGELGRGRGGGHCMTCPI ERAPL >Mature_404_residues TFGVYSEIGTLRKVMVCRPGLAQARLTPANCRDLLFDDVLWVSQAKNDHYAFVSTMQEHGVDVLEMHDLLADILQGREAR DWVLEHKLAPGTVDAELAAQLRPWLQEMEPGELATRLIGGIVRAELPFEADGLLAQCTPPSGFILPPLPNTLFTRDSSCW INDGVVLGSMYWPARRQETLLATAIYRFHPLFSSGTRVWWGGPETDHGGATLEGGDVMPLSRDVVLIGMGERSSPQGVAQ LARALFAGESVKQVIAAQLPRSRGAMHLDTVFTFCDRDLVTIFPEVVDAIRCTSLRPGKQPGQLDVRAESAPFLDVVAQA LGIGTLRTVATGGDTWESEREQWDDGNNVIALAPGIVVAYNRNVYTNTLLRKAGVEVITIPSGELGRGRGGGHCMTCPIE RAPL
Specific function: Unknown
COG id: COG2235
COG function: function code E; Arginine deiminase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arginine deiminase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003198 - InterPro: IPR003876 [H]
Pfam domain/function: PF02274 Amidinotransf [H]
EC number: =3.5.3.6 [H]
Molecular weight: Translated: 44136; Mature: 44005
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFGVYSEIGTLRKVMVCRPGLAQARLTPANCRDLLFDDVLWVSQAKNDHYAFVSTMQEH CCCCCHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH GVDVLEMHDLLADILQGREARDWVLEHKLAPGTVDAELAAQLRPWLQEMEPGELATRLIG CCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH GIVRAELPFEADGLLAQCTPPSGFILPPLPNTLFTRDSSCWINDGVVLGSMYWPARRQET HHHHCCCCCCCCCEEEEECCCCCEECCCCCCHHEECCCCCEEECCEEEECCCCCCCCHHH LLATAIYRFHPLFSSGTRVWWGGPETDHGGATLEGGDVMPLSRDVVLIGMGERSSPQGVA HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEECCCCCCCCCCCEEEEECCCCCCHHHHH QLARALFAGESVKQVIAAQLPRSRGAMHLDTVFTFCDRDLVTIFPEVVDAIRCTSLRPGK HHHHHHHCCHHHHHHHHHHCCCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC QPGQLDVRAESAPFLDVVAQALGIGTLRTVATGGDTWESEREQWDDGNNVIALAPGIVVA CCCCEEEEECCCCHHHHHHHHHCCCHHHEEECCCCCCHHHHHHCCCCCCEEEECCCEEEE YNRNVYTNTLLRKAGVEVITIPSGELGRGRGGGHCMTCPIERAPL ECCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEECCCCCCCC >Mature Secondary Structure TFGVYSEIGTLRKVMVCRPGLAQARLTPANCRDLLFDDVLWVSQAKNDHYAFVSTMQEH CCCCHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH GVDVLEMHDLLADILQGREARDWVLEHKLAPGTVDAELAAQLRPWLQEMEPGELATRLIG CCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH GIVRAELPFEADGLLAQCTPPSGFILPPLPNTLFTRDSSCWINDGVVLGSMYWPARRQET HHHHCCCCCCCCCEEEEECCCCCEECCCCCCHHEECCCCCEEECCEEEECCCCCCCCHHH LLATAIYRFHPLFSSGTRVWWGGPETDHGGATLEGGDVMPLSRDVVLIGMGERSSPQGVA HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEECCCCCCCCCCCEEEEECCCCCCHHHHH QLARALFAGESVKQVIAAQLPRSRGAMHLDTVFTFCDRDLVTIFPEVVDAIRCTSLRPGK HHHHHHHCCHHHHHHHHHHCCCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC QPGQLDVRAESAPFLDVVAQALGIGTLRTVATGGDTWESEREQWDDGNNVIALAPGIVVA CCCCEEEEECCCCHHHHHHHHHCCCHHHEEECCCCCCHHHHHHCCCCCCEEEECCCEEEE YNRNVYTNTLLRKAGVEVITIPSGELGRGRGGGHCMTCPIERAPL ECCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2537202; 10984043; 2158926 [H]