| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91783893
Identifier: 91783893
GI number: 91783893
Start: 2810184
End: 2810789
Strand: Reverse
Name: 91783893
Synonym: Bxe_A1918
Alternate gene names: NA
Gene position: 2810789-2810184 (Counterclockwise)
Preceding gene: 91783894
Following gene: 91783892
Centisome position: 57.41
GC content: 65.51
Gene sequence:
>606_bases ATGCCTGAACAATTCTGGTTGCCTGGGCTCGAGGCGCCGCCAACGCCGACAGACGGCCTGTTTTTTGCCGTCTTTCCAGA CGCCAATACAGCGGCCGGCATCTCGAAGCTGGCGCAACGGCTTTGCGCGGAGACGCGCGCGCGCAGCAAGCCGCTCGCGG CGGCCCGCTTGCACGTCACCTTGCAGCACCTCGGCAATTTCGTGGGAGGTTTGCCGCAAGCGCGAGTCGACGCGGCGATG AAAGCTGCTGCGTCAATCAGGATGGAGCCGTTCAGCGTCGAATTCGACACGGTGGTGAGCTTTGCCTCGAAGCCTCGACC GGGACCATTGGTGCTGACAGGCGGCGAGGGTGTGGTTGGGTTGCATAGGCTGCACGACGCTTTGTGCCGCGAACTGCAAA ACGCGGATTTCGGCGAGCACGCCGCGCCGGCCGCGGTGGACTATACGCCGCACGTCACGCTGGCGTATGGCATGCCGTGG GCCGCCGCACGCCCTATCGAGCCGGTGTGCTGGAATGTGCGCGAGTTCGCGCTGGTGCACAGTCTGCTCGGGCGCACGCG CCATGTCCTGCTGGCGCGGTGGCCTTTGGCCGATCACGGGTCATAG
Upstream 100 bases:
>100_bases TTCGCATAGTCGGGTGGTCTGAATCGATCAGGCGCTCAGGCAAGCCTGTGCAATGAACGGGGATTCATTTACATGCCGGC TTTATCTGGTCAGGAACTCC
Downstream 100 bases:
>100_bases CGCTCTGCGGCACCCAGGCGATGCTGACCTGTTGAAATGCGACGGCTCGAAGCCGCATGCCGCAGGAGGTTTCGTCGGCT GGAGAGCCGGAACGATCGTG
Product: putative ligase
Products: NA
Alternate protein names: Phosphoesterase HXTX; 2 5' RNA Ligase; Ligase; Ligase Protein; 2h Phosphoesterase
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MPEQFWLPGLEAPPTPTDGLFFAVFPDANTAAGISKLAQRLCAETRARSKPLAAARLHVTLQHLGNFVGGLPQARVDAAM KAAASIRMEPFSVEFDTVVSFASKPRPGPLVLTGGEGVVGLHRLHDALCRELQNADFGEHAAPAAVDYTPHVTLAYGMPW AAARPIEPVCWNVREFALVHSLLGRTRHVLLARWPLADHGS
Sequences:
>Translated_201_residues MPEQFWLPGLEAPPTPTDGLFFAVFPDANTAAGISKLAQRLCAETRARSKPLAAARLHVTLQHLGNFVGGLPQARVDAAM KAAASIRMEPFSVEFDTVVSFASKPRPGPLVLTGGEGVVGLHRLHDALCRELQNADFGEHAAPAAVDYTPHVTLAYGMPW AAARPIEPVCWNVREFALVHSLLGRTRHVLLARWPLADHGS >Mature_200_residues PEQFWLPGLEAPPTPTDGLFFAVFPDANTAAGISKLAQRLCAETRARSKPLAAARLHVTLQHLGNFVGGLPQARVDAAMK AAASIRMEPFSVEFDTVVSFASKPRPGPLVLTGGEGVVGLHRLHDALCRELQNADFGEHAAPAAVDYTPHVTLAYGMPWA AARPIEPVCWNVREFALVHSLLGRTRHVLLARWPLADHGS
Specific function: Unknown
COG id: COG1514
COG function: function code J; 2'-5' RNA ligase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21681; Mature: 21550
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEQFWLPGLEAPPTPTDGLFFAVFPDANTAAGISKLAQRLCAETRARSKPLAAARLHVT CCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LQHLGNFVGGLPQARVDAAMKAAASIRMEPFSVEFDTVVSFASKPRPGPLVLTGGEGVVG HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCHH LHRLHDALCRELQNADFGEHAAPAAVDYTPHVTLAYGMPWAAARPIEPVCWNVREFALVH HHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH SLLGRTRHVLLARWPLADHGS HHHHHHHEEEEEECCCCCCCC >Mature Secondary Structure PEQFWLPGLEAPPTPTDGLFFAVFPDANTAAGISKLAQRLCAETRARSKPLAAARLHVT CCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LQHLGNFVGGLPQARVDAAMKAAASIRMEPFSVEFDTVVSFASKPRPGPLVLTGGEGVVG HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCHH LHRLHDALCRELQNADFGEHAAPAAVDYTPHVTLAYGMPWAAARPIEPVCWNVREFALVH HHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH SLLGRTRHVLLARWPLADHGS HHHHHHHEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA