Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is yhdN [H]

Identifier: 91783892

GI number: 91783892

Start: 2809638

End: 2810039

Strand: Reverse

Name: yhdN [H]

Synonym: Bxe_A1919

Alternate gene names: 91783892

Gene position: 2810039-2809638 (Counterclockwise)

Preceding gene: 91783893

Following gene: 91783891

Centisome position: 57.4

GC content: 67.41

Gene sequence:

>402_bases
ATGAAATTGCTTGATGCGTTAGTCGAACAGCGTATTGCCGCCGCAGCCGCACGCGGCGAGTTCGACCAGTTACCGGGCGC
GGGCGCGCCGCTATCCCTGGGCGACGATGCGCTGGTCCCCGAAGAAGTGCGCGTCGCCAACCGGATTTTGAAGAACGCGG
GTTTCGTGCCGCCCGCTGTCGAGCAGTTGCGCGCGTTGCGCGACCTGCGAGCGGAGTTGAATGCCGTGAGCGACCGGGCT
GCCCGCTGCCGGCTTCAGGCGCGCATGCTGGCGCTCGATATGGCGCTTGAATCACTGCGCGGCGGCCCGCTGGTTCTGCC
ACGCGAATACTGTCGGCGGATCGCCGAGCGGTTGTCGGAGCGCGCCGGCAGTCCCGATACGGCAGAGGCGGGTTCGCCGT
GA

Upstream 100 bases:

>100_bases
GCTCGAAGCCGCATGCCGCAGGAGGTTTCGTCGGCTGGAGAGCCGGAACGATCGTGCGCTGCCTGATAGAATGCTTGGGC
CGCAACGTAGTGGATCGCAG

Downstream 100 bases:

>100_bases
GCGAGCCGCTTGCCCCTTCCACGGTGCCGGTTTCAGATTCTTTCAAATCTCACGAAGCGCCGGATGCCATGAGTTCTTCA
GCCTCGGCGAATGGCGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MKLLDALVEQRIAAAAARGEFDQLPGAGAPLSLGDDALVPEEVRVANRILKNAGFVPPAVEQLRALRDLRAELNAVSDRA
ARCRLQARMLALDMALESLRGGPLVLPREYCRRIAERLSERAGSPDTAEAGSP

Sequences:

>Translated_133_residues
MKLLDALVEQRIAAAAARGEFDQLPGAGAPLSLGDDALVPEEVRVANRILKNAGFVPPAVEQLRALRDLRAELNAVSDRA
ARCRLQARMLALDMALESLRGGPLVLPREYCRRIAERLSERAGSPDTAEAGSP
>Mature_133_residues
MKLLDALVEQRIAAAAARGEFDQLPGAGAPLSLGDDALVPEEVRVANRILKNAGFVPPAVEQLRALRDLRAELNAVSDRA
ARCRLQARMLALDMALESLRGGPLVLPREYCRRIAERLSERAGSPDTAEAGSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789688, Length=130, Percent_Identity=36.1538461538462, Blast_Score=73, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018961 [H]

Pfam domain/function: PF09350 DUF1992 [H]

EC number: NA

Molecular weight: Translated: 14296; Mature: 14296

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLDALVEQRIAAAAARGEFDQLPGAGAPLSLGDDALVPEEVRVANRILKNAGFVPPAV
CHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHH
EQLRALRDLRAELNAVSDRAARCRLQARMLALDMALESLRGGPLVLPREYCRRIAERLSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
RAGSPDTAEAGSP
HCCCCCCCCCCCC
>Mature Secondary Structure
MKLLDALVEQRIAAAAARGEFDQLPGAGAPLSLGDDALVPEEVRVANRILKNAGFVPPAV
CHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHH
EQLRALRDLRAELNAVSDRAARCRLQARMLALDMALESLRGGPLVLPREYCRRIAERLSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
RAGSPDTAEAGSP
HCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8063098; 9278503 [H]