| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91783838
Identifier: 91783838
GI number: 91783838
Start: 2747363
End: 2748700
Strand: Direct
Name: 91783838
Synonym: Bxe_A1974
Alternate gene names: NA
Gene position: 2747363-2748700 (Clockwise)
Preceding gene: 91783837
Following gene: 91783839
Centisome position: 56.12
GC content: 64.95
Gene sequence:
>1338_bases ATGAGCGAACCGTCCCTCGATGCCGTGCGCCGCGACCAGGCGGGCTGGATTTTCCTGCATATCGAAGGCGAACCCTACGA CCGCGGCGAGCAGCACGGCCAGTTGCTCGCCACGGAAATCCGGAACGCGATCCGCACCGCCCGCTACCTCGCGAAGTGGG ACACCGGCGAAGACTTCGACACCTTCGTCGACGCCGCCGTCGCTCAGTTCGCCAATAAACTCGACACTGAATTCGCCGAC GAAATCCAGGGCATCGCCGACGGCGCGAAACTGCCGTTCGCCGAAGTGCTGGCCTGGAACGGCTACATGGATCTGCTGCA AAGCTGGTGGCCCACCCACGCGGCGCAGCAGCAGCCGAGCCTTGGCCTGAAACCGTGGCGCGGACGGCGCGGACACCATT GCAGCGCGTTCATCGCCACCGGCCGCGCAACCCGCGACGGCCGCATCGTGATGGCGCACAACTCGTGGGACCGCTACGCG GCCGGGGACGCCTTCAATGTCGTCTTCGACATCGTGCCTGACTGCGGCAACCGCATCCTCATGCAAGGCTTGCCCGGCTG CATTTCCAGTCTCACCGATTTCTGGGTCACCGCCGCCGGGCTGATGGTGACGGAAACCACCATCTCCAATTTCGTCGGCT ACAACGCGGCGGGCGCGCCCGAGTTCTATCGCTCGCGGCGCGCGTCGCAGTACGCGAACAGCATTGGCGAATGGTGCGAA ATGTTCGCGGTGGCCAACAACGGCGGCTACGCGAACAGTTGGCTCCTCGGCGACGCCAAGACCGGCGAGATCGCGCGCTA CGAACTGGGCCTGCACTTCTCCGGTTTCGAAAGCACCAGGGACGGCTTCTACAGCGGCTACAACACCGCGACCGATCTGA AGATCCGCAATCAGGAATGCCTCGGCGAAGGCGAAGACTATACGGACGTGCGCAAGAACGGCGCGCGGCGCCTGCGCTTC ATGCAGCTGGAAGAGATGCATCGCGGCAAGATCGACGTGGAACTCGCGAAGGAGATGATCGCCGACCATCACGACGTCTA CCTCGAGCGCAACGACAACCCGTGCTCGCGCACCATCTGCGGGCACCTGGAACTGGACGACGCGCGCTTCGGTGGCACCG ATCACGGACCGTTCAATCCGTGGGGCGCCAACGACGGCAAGGTGGTCGACACCGACATGGCGCGCGAGATGGCGTTCAGC GCGCGCTGGGGCCATCCGTGCGGGCGGCCGTTCGACGCTCAGGCGTTCATGAAGCGGCATCCGCAGTGGAACTGGCTGAA CGGCTACATGCGCGACCGGCCTTCGTGGCCGTGGACGCGCTTCGAAGTGCTGCGTTAG
Upstream 100 bases:
>100_bases CAAATTCTCTACAATGGACAGACCGCTGCGGCGAACGCCGGCAGCGCGCGTTACGCCAGAACGGGCGCACCGAGACGCCC GTCCTTCGATCGGAGCGAAG
Downstream 100 bases:
>100_bases CAGCCGCCCGTATCGCGCCGCAACACGAGCGCCGCACGACCGTTCGCGACGGCGCTGCTGCGTTGTTGCCGCGTTTCTGC CATCATCTGAAATCGACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MSEPSLDAVRRDQAGWIFLHIEGEPYDRGEQHGQLLATEIRNAIRTARYLAKWDTGEDFDTFVDAAVAQFANKLDTEFAD EIQGIADGAKLPFAEVLAWNGYMDLLQSWWPTHAAQQQPSLGLKPWRGRRGHHCSAFIATGRATRDGRIVMAHNSWDRYA AGDAFNVVFDIVPDCGNRILMQGLPGCISSLTDFWVTAAGLMVTETTISNFVGYNAAGAPEFYRSRRASQYANSIGEWCE MFAVANNGGYANSWLLGDAKTGEIARYELGLHFSGFESTRDGFYSGYNTATDLKIRNQECLGEGEDYTDVRKNGARRLRF MQLEEMHRGKIDVELAKEMIADHHDVYLERNDNPCSRTICGHLELDDARFGGTDHGPFNPWGANDGKVVDTDMAREMAFS ARWGHPCGRPFDAQAFMKRHPQWNWLNGYMRDRPSWPWTRFEVLR
Sequences:
>Translated_445_residues MSEPSLDAVRRDQAGWIFLHIEGEPYDRGEQHGQLLATEIRNAIRTARYLAKWDTGEDFDTFVDAAVAQFANKLDTEFAD EIQGIADGAKLPFAEVLAWNGYMDLLQSWWPTHAAQQQPSLGLKPWRGRRGHHCSAFIATGRATRDGRIVMAHNSWDRYA AGDAFNVVFDIVPDCGNRILMQGLPGCISSLTDFWVTAAGLMVTETTISNFVGYNAAGAPEFYRSRRASQYANSIGEWCE MFAVANNGGYANSWLLGDAKTGEIARYELGLHFSGFESTRDGFYSGYNTATDLKIRNQECLGEGEDYTDVRKNGARRLRF MQLEEMHRGKIDVELAKEMIADHHDVYLERNDNPCSRTICGHLELDDARFGGTDHGPFNPWGANDGKVVDTDMAREMAFS ARWGHPCGRPFDAQAFMKRHPQWNWLNGYMRDRPSWPWTRFEVLR >Mature_444_residues SEPSLDAVRRDQAGWIFLHIEGEPYDRGEQHGQLLATEIRNAIRTARYLAKWDTGEDFDTFVDAAVAQFANKLDTEFADE IQGIADGAKLPFAEVLAWNGYMDLLQSWWPTHAAQQQPSLGLKPWRGRRGHHCSAFIATGRATRDGRIVMAHNSWDRYAA GDAFNVVFDIVPDCGNRILMQGLPGCISSLTDFWVTAAGLMVTETTISNFVGYNAAGAPEFYRSRRASQYANSIGEWCEM FAVANNGGYANSWLLGDAKTGEIARYELGLHFSGFESTRDGFYSGYNTATDLKIRNQECLGEGEDYTDVRKNGARRLRFM QLEEMHRGKIDVELAKEMIADHHDVYLERNDNPCSRTICGHLELDDARFGGTDHGPFNPWGANDGKVVDTDMAREMAFSA RWGHPCGRPFDAQAFMKRHPQWNWLNGYMRDRPSWPWTRFEVLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005079 [H]
Pfam domain/function: PF03417 AAT [H]
EC number: NA
Molecular weight: Translated: 50351; Mature: 50219
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPSLDAVRRDQAGWIFLHIEGEPYDRGEQHGQLLATEIRNAIRTARYLAKWDTGEDFD CCCCCCHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH TFVDAAVAQFANKLDTEFADEIQGIADGAKLPFAEVLAWNGYMDLLQSWWPTHAAQQQPS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHCCCCHHCCCCC LGLKPWRGRRGHHCSAFIATGRATRDGRIVMAHNSWDRYAAGDAFNVVFDIVPDCGNRIL CCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHHEECCCCCCHHH MQGLPGCISSLTDFWVTAAGLMVTETTISNFVGYNAAGAPEFYRSRRASQYANSIGEWCE HHCCCHHHHHHHHHHHHHHHHHEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH MFAVANNGGYANSWLLGDAKTGEIARYELGLHFSGFESTRDGFYSGYNTATDLKIRNQEC HHEEECCCCCCCCEEECCCCCCCEEEEEECEEECCCCHHCCCCCCCCCCCEEEEECCHHH LGEGEDYTDVRKNGARRLRFMQLEEMHRGKIDVELAKEMIADHHDVYLERNDNPCSRTIC CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHEE GHLELDDARFGGTDHGPFNPWGANDGKVVDTDMAREMAFSARWGHPCGRPFDAQAFMKRH CCEEECCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCHHHHHHHC PQWNWLNGYMRDRPSWPWTRFEVLR CCCCCCCCHHHCCCCCCCHHHEECC >Mature Secondary Structure SEPSLDAVRRDQAGWIFLHIEGEPYDRGEQHGQLLATEIRNAIRTARYLAKWDTGEDFD CCCCCHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH TFVDAAVAQFANKLDTEFADEIQGIADGAKLPFAEVLAWNGYMDLLQSWWPTHAAQQQPS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHCCCCHHCCCCC LGLKPWRGRRGHHCSAFIATGRATRDGRIVMAHNSWDRYAAGDAFNVVFDIVPDCGNRIL CCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHHEECCCCCCHHH MQGLPGCISSLTDFWVTAAGLMVTETTISNFVGYNAAGAPEFYRSRRASQYANSIGEWCE HHCCCHHHHHHHHHHHHHHHHHEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH MFAVANNGGYANSWLLGDAKTGEIARYELGLHFSGFESTRDGFYSGYNTATDLKIRNQEC HHEEECCCCCCCCEEECCCCCCCEEEEEECEEECCCCHHCCCCCCCCCCCEEEEECCHHH LGEGEDYTDVRKNGARRLRFMQLEEMHRGKIDVELAKEMIADHHDVYLERNDNPCSRTIC CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHEE GHLELDDARFGGTDHGPFNPWGANDGKVVDTDMAREMAFSARWGHPCGRPFDAQAFMKRH CCEEECCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCHHHHHHHC PQWNWLNGYMRDRPSWPWTRFEVLR CCCCCCCCHHHCCCCCCCHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]