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The map label for this gene is ynfJ [C]

Identifier: 91783837

GI number: 91783837

Start: 2745425

End: 2747200

Strand: Direct

Name: ynfJ [C]

Synonym: Bxe_A1975

Alternate gene names: 91783837

Gene position: 2745425-2747200 (Clockwise)

Preceding gene: 91783836

Following gene: 91783838

Centisome position: 56.08

GC content: 66.16

Gene sequence:

>1776_bases
GTGCGCGCTTTTCAACCCGTTTTCACGCCCCGTACCGCCGACGTGCTTTCATTCCTGCTGAAGCTGCGCACCCGCGCCCA
AGATCTGTTCCGCCTCTCCGAAGCCCACACGATGCTGGTCTGGTCGGTCGTGGTCGGCGTCGCGGGCGCCTTCGCCACGA
TTGCCTTTCGGGAAGGCATCGCGCTGCTGCAAACGGCGGTGGTCGGCAAGGCCGGCAGCTTCGTCGAAATGGCGCGCAGC
CTGCCGTGGACCGTGCGGATCTGGCTGCCGGCGGCAGGCGGCCTGATCGCCGGCTTCTTTCTGCTGATCGCGCGGCGTCA
CGAGGACAAATCCAATCACGTCGACTACATGGAAGCGGTCGCGATCGGCGACGGCGTCGTGCCGGTCAAGCTGAGCTTCT
GGCGCAGCGTGTCGTCGCTGTTCACGATTTCGAGCGGCGGCTCGATCGGCCGCGAAGGTCCGATGGTGCAGCTGGCGGCG
CTGGCCGCGTCGCTGATCGGCCGCTGGGTGCATTTCGATCCGGCGCGGCTGCGTTTGCTGGTGGCGTGCGGCGCGGCGGC
CGGCATCACCTCCGCGTACAGCGCGCCGATCGCGGGCGCGTTTTTCGTCACCGAAATCGTGCTCGGCTCGATTGCGATGG
AAAGCTTCGGGCCGGTGGTGGTGTCGGCCGTGGTGGCCAACATCACGATGCGCGAATTCGCCGGCTACAGGCCGCCGTAT
GAAATGCCGGTATTTCCGCCGGTGGCCGGTCTCGAGGTGCTGCTGTTCGTCGCGCTCGGCCTGCTGTGCGGCGCGGCCGC
GCCGCAGTTTCTGCGGCTGCTCGACGTATCGAAGAAAAGCTTTCGCAAGCTGCCGGTGCCGCTGCCCGTGAGGCTCGCGC
TCGGCGGTCTGGTGGTCGGGATTCTGTCGGTGTGGACGCCCGAGGTGTGGGGCAACGGCTATAGCGTCGTCAACTCGATC
CTGCATTCGCCGTGGACCTGGACCGCGCTCGTCCTCGTGCTGGTGTTCAAGCTCGTCGCGACCGCGGCCACTTCCGGCTC
CGGCGCGGTAGGCGGGGTGTTCACGCCGACGCTCTTCGTCGGCGCGGTGGTCGGCTCGCTGTTCGGCCAGGGCATGCATG
CGCTGTGGCCGCACGGCACCTCGGCGCCGTTCGCGTATGCGATGGTCGGCATGGGCGCGTTTCTGGCGGGCGCCACCCAG
GCGCCGCTGATGGCGATCCTGATGATCTTCGAGATGACGCTCAGCTACCAGGTCGTGCTGCCGCTGATGCTCTCCTGCGT
GGTCGCCTATTTCGTGTCGCGCGCAATCGGCAAGACGTCCATGTATGAAATCACCTTGCGCCGCAATCACGAGGAACAGG
AGCGCTCGCGTCTGCGCGCCACGCAGATGCGCGAGCTGATCCGTCCCGCCGAAACCGTCGTGCGGCCCAATGCGACCGTG
CACGAAATGACACGCGTGTTCCTCGAATATCCGGTGAAGTATCTCTACGTGGCCAGCGAGTCCGGCGCGTTCCTCGGCGT
GGTCGCGCTCAAGGACATCACTTCCGACCTGCTCGACGGGCGCGACACTGCCGCGAAGACGGCGGCGGATTATCTGCAGC
CGCATTTCGACGTGCTCACGCCGGACATGCCGCTCGGCGTGGCATTGCAGCACTTCCTCGCGTTTCAGGGCGAGCGCCTG
CCGGTAGTCGAAAGCGCGGCGCATCCCACGCTGGCCGGCGTGGTCTACAAAACTTCGTTGCTCGACGCCTATTTCCGCAT
GAATCCGACACGTTAA

Upstream 100 bases:

>100_bases
TACCCGGAACTCGACAAGGCGGCCACTTGACCGGCGCCGTTTTCCTCCGCTCGCTCACCGCATCGCGCCCGCCGCTTCAG
GCGGGCGCGATGCCGTTGCA

Downstream 100 bases:

>100_bases
GCGCCGCGCGGTCCGCGTTCAGCGCCCGTCCGCGGCCTCCTTGCGGCCCGTGCAAAGCCCGGCAAATTCTCTACAATGGA
CAGACCGCTGCGGCGAACGC

Product: putative voltage-gated ClC-type chloride channel ClcB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 591; Mature: 591

Protein sequence:

>591_residues
MRAFQPVFTPRTADVLSFLLKLRTRAQDLFRLSEAHTMLVWSVVVGVAGAFATIAFREGIALLQTAVVGKAGSFVEMARS
LPWTVRIWLPAAGGLIAGFFLLIARRHEDKSNHVDYMEAVAIGDGVVPVKLSFWRSVSSLFTISSGGSIGREGPMVQLAA
LAASLIGRWVHFDPARLRLLVACGAAAGITSAYSAPIAGAFFVTEIVLGSIAMESFGPVVVSAVVANITMREFAGYRPPY
EMPVFPPVAGLEVLLFVALGLLCGAAAPQFLRLLDVSKKSFRKLPVPLPVRLALGGLVVGILSVWTPEVWGNGYSVVNSI
LHSPWTWTALVLVLVFKLVATAATSGSGAVGGVFTPTLFVGAVVGSLFGQGMHALWPHGTSAPFAYAMVGMGAFLAGATQ
APLMAILMIFEMTLSYQVVLPLMLSCVVAYFVSRAIGKTSMYEITLRRNHEEQERSRLRATQMRELIRPAETVVRPNATV
HEMTRVFLEYPVKYLYVASESGAFLGVVALKDITSDLLDGRDTAAKTAADYLQPHFDVLTPDMPLGVALQHFLAFQGERL
PVVESAAHPTLAGVVYKTSLLDAYFRMNPTR

Sequences:

>Translated_591_residues
MRAFQPVFTPRTADVLSFLLKLRTRAQDLFRLSEAHTMLVWSVVVGVAGAFATIAFREGIALLQTAVVGKAGSFVEMARS
LPWTVRIWLPAAGGLIAGFFLLIARRHEDKSNHVDYMEAVAIGDGVVPVKLSFWRSVSSLFTISSGGSIGREGPMVQLAA
LAASLIGRWVHFDPARLRLLVACGAAAGITSAYSAPIAGAFFVTEIVLGSIAMESFGPVVVSAVVANITMREFAGYRPPY
EMPVFPPVAGLEVLLFVALGLLCGAAAPQFLRLLDVSKKSFRKLPVPLPVRLALGGLVVGILSVWTPEVWGNGYSVVNSI
LHSPWTWTALVLVLVFKLVATAATSGSGAVGGVFTPTLFVGAVVGSLFGQGMHALWPHGTSAPFAYAMVGMGAFLAGATQ
APLMAILMIFEMTLSYQVVLPLMLSCVVAYFVSRAIGKTSMYEITLRRNHEEQERSRLRATQMRELIRPAETVVRPNATV
HEMTRVFLEYPVKYLYVASESGAFLGVVALKDITSDLLDGRDTAAKTAADYLQPHFDVLTPDMPLGVALQHFLAFQGERL
PVVESAAHPTLAGVVYKTSLLDAYFRMNPTR
>Mature_591_residues
MRAFQPVFTPRTADVLSFLLKLRTRAQDLFRLSEAHTMLVWSVVVGVAGAFATIAFREGIALLQTAVVGKAGSFVEMARS
LPWTVRIWLPAAGGLIAGFFLLIARRHEDKSNHVDYMEAVAIGDGVVPVKLSFWRSVSSLFTISSGGSIGREGPMVQLAA
LAASLIGRWVHFDPARLRLLVACGAAAGITSAYSAPIAGAFFVTEIVLGSIAMESFGPVVVSAVVANITMREFAGYRPPY
EMPVFPPVAGLEVLLFVALGLLCGAAAPQFLRLLDVSKKSFRKLPVPLPVRLALGGLVVGILSVWTPEVWGNGYSVVNSI
LHSPWTWTALVLVLVFKLVATAATSGSGAVGGVFTPTLFVGAVVGSLFGQGMHALWPHGTSAPFAYAMVGMGAFLAGATQ
APLMAILMIFEMTLSYQVVLPLMLSCVVAYFVSRAIGKTSMYEITLRRNHEEQERSRLRATQMRELIRPAETVVRPNATV
HEMTRVFLEYPVKYLYVASESGAFLGVVALKDITSDLLDGRDTAAKTAADYLQPHFDVLTPDMPLGVALQHFLAFQGERL
PVVESAAHPTLAGVVYKTSLLDAYFRMNPTR

Specific function: Unknown

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chloride channel (TC 2.A.49) family. ClcB subfamily [H]

Homologues:

Organism=Homo sapiens, GI55770838, Length=455, Percent_Identity=23.5164835164835, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI55770840, Length=455, Percent_Identity=23.5164835164835, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI4557473, Length=238, Percent_Identity=26.4705882352941, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI189217923, Length=238, Percent_Identity=26.4705882352941, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI189217921, Length=238, Percent_Identity=26.4705882352941, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI153252026, Length=244, Percent_Identity=25, Blast_Score=70, Evalue=5e-12,
Organism=Escherichia coli, GI87081943, Length=426, Percent_Identity=39.6713615023474, Blast_Score=223, Evalue=2e-59,
Organism=Escherichia coli, GI1786350, Length=443, Percent_Identity=27.5395033860045, Blast_Score=104, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17532615, Length=420, Percent_Identity=24.5238095238095, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24665008, Length=454, Percent_Identity=24.4493392070485, Blast_Score=86, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014743
- InterPro:   IPR001807 [H]

Pfam domain/function: PF00654 Voltage_CLC [H]

EC number: NA

Molecular weight: Translated: 63676; Mature: 63676

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAFQPVFTPRTADVLSFLLKLRTRAQDLFRLSEAHTMLVWSVVVGVAGAFATIAFREGI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLQTAVVGKAGSFVEMARSLPWTVRIWLPAAGGLIAGFFLLIARRHEDKSNHVDYMEAV
HHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
AIGDGVVPVKLSFWRSVSSLFTISSGGSIGREGPMVQLAALAASLIGRWVHFDPARLRLL
HHCCCCEEEHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH
VACGAAAGITSAYSAPIAGAFFVTEIVLGSIAMESFGPVVVSAVVANITMREFAGYRPPY
HHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC
EMPVFPPVAGLEVLLFVALGLLCGAAAPQFLRLLDVSKKSFRKLPVPLPVRLALGGLVVG
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
ILSVWTPEVWGNGYSVVNSILHSPWTWTALVLVLVFKLVATAATSGSGAVGGVFTPTLFV
HHHHHCHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
GAVVGSLFGQGMHALWPHGTSAPFAYAMVGMGAFLAGATQAPLMAILMIFEMTLSYQVVL
HHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
PLMLSCVVAYFVSRAIGKTSMYEITLRRNHEEQERSRLRATQMRELIRPAETVVRPNATV
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
HEMTRVFLEYPVKYLYVASESGAFLGVVALKDITSDLLDGRDTAAKTAADYLQPHFDVLT
HHHHHHHHHCCEEEEEEECCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHCC
PDMPLGVALQHFLAFQGERLPVVESAAHPTLAGVVYKTSLLDAYFRMNPTR
CCCCHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRAFQPVFTPRTADVLSFLLKLRTRAQDLFRLSEAHTMLVWSVVVGVAGAFATIAFREGI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLQTAVVGKAGSFVEMARSLPWTVRIWLPAAGGLIAGFFLLIARRHEDKSNHVDYMEAV
HHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
AIGDGVVPVKLSFWRSVSSLFTISSGGSIGREGPMVQLAALAASLIGRWVHFDPARLRLL
HHCCCCEEEHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH
VACGAAAGITSAYSAPIAGAFFVTEIVLGSIAMESFGPVVVSAVVANITMREFAGYRPPY
HHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC
EMPVFPPVAGLEVLLFVALGLLCGAAAPQFLRLLDVSKKSFRKLPVPLPVRLALGGLVVG
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
ILSVWTPEVWGNGYSVVNSILHSPWTWTALVLVLVFKLVATAATSGSGAVGGVFTPTLFV
HHHHHCHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
GAVVGSLFGQGMHALWPHGTSAPFAYAMVGMGAFLAGATQAPLMAILMIFEMTLSYQVVL
HHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
PLMLSCVVAYFVSRAIGKTSMYEITLRRNHEEQERSRLRATQMRELIRPAETVVRPNATV
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
HEMTRVFLEYPVKYLYVASESGAFLGVVALKDITSDLLDGRDTAAKTAADYLQPHFDVLT
HHHHHHHHHCCEEEEEEECCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHCC
PDMPLGVALQHFLAFQGERLPVVESAAHPTLAGVVYKTSLLDAYFRMNPTR
CCCCHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]