| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is ttuB [H]
Identifier: 91783831
GI number: 91783831
Start: 2738795
End: 2740084
Strand: Reverse
Name: ttuB [H]
Synonym: Bxe_A1981
Alternate gene names: 91783831
Gene position: 2740084-2738795 (Counterclockwise)
Preceding gene: 91783832
Following gene: 91783830
Centisome position: 55.97
GC content: 62.64
Gene sequence:
>1290_bases ATGACCTCATCGCTTGCGATTCGCCGCTGGTGGACGATCATGCCGATCGTATTCATCACGTACAGCCTCGCCTATCTGGA TCGCGCGAACTTCGGGTTCGCGTCCGCCGCCGGCATCAACCAGGATCTCGGCATCAGCAAGGGGCTGTCGTCGCTGATCG GCGCGCTGTTCTTCCTCGGCTATTTCTTCTTCCAGATTCCCGGCGCGATCTACGCGGAACGCCGCAGCGTCAAGAAGCTC GTGTTCTGGAGCCTGGTTCTGTGGGGCGGTTGCGCGGCGCTGACCGGCATGGTCAGCAACATTCCGTCGCTGATGGTGAT CCGCTTCGTGCTCGGCGTGGTCGAGGCCGCGGTCATGCCGGCCATGCTGATTTTCATCAGCAACTGGTTCACCAAGAGCG AGCGCTCGCGCGCCAACACGTTCCTGATTCTCGGCAATCCGGTGACGGTGCTGTGGATGTCGGTGGTGTCGGGCTATCTG GTGCATTCGTTCGGCTGGCGTCACATGTTCATCGCCGAAGGCGCGCCCGCGATCATCTGGGCGGTGATCTGGTGGTTCAT CGTGCAGGACAAGCCGCAGCAGGTGTCGTGGCTCACGCAGCAGCAGAAGGACGACCTCGCCGAAACGCTGCGCGCCGAGC AGGCCGCGATCAAGCCGGTGCGCAACTACAGCGAGGCCTTCAAAACGCCCGCGGTGATCAAGCTGTGCGCGCAATATTTC TGCTGGAGCATCGGCGTGTATGGCTTCGTGCTGTGGTTGCCGTCGATCCTGAAGAACGGTTCGACGCTCGGCATGGTCGA AACCGGCTGGCTCTCGGCGCTGCCGTATCTCGCCGCGACCATCGCGATGCTTGCAGCTTCGTGGGCATCGGATAAACTCA ACCGCCGTAAAGTCTTCGTGTGGCCGTTCCTGCTGGTCGGCGCGGTGGCGTTCGCGGCTTCGTACGCGCTCGGCTCCACG CATTTCTGGCTTTCATATGCATTGCTGGTGATCGCCGGCGCCGCGATGTACGCGCCGTATGGCCCGTTCTTCGCGATCGT GCCGGAACTGCTGCCGAAGAACGTCGCGGGCGGCGCAATGGCGCTGATCAACAGCATGGGGGCGCTCGGTTCGTTCGTCG GCTCGTATGTGGTCGGTTATCTGAATGGCGCCACCGGTTCGCCCGCCGCGTCGTACGCGTTCATGAGCGTGGCGCTCGTC GCCGCCGTGATTCTGACGCTGGTCGTCAAACCGCAGCCGCAAGCGCTGAACAATGCGCCGCCGCTCGCTACCCCGTTGCA AGGAAAATAA
Upstream 100 bases:
>100_bases TAAGACCTGTTCAGCAGTCTGCTTCGATAACAGCAAGAGCGCCCGGACAGAGCGCCCCATGACCGTCCATCATTGTTTCG GGAAGTCAAAGGAGACACCC
Downstream 100 bases:
>100_bases GCTGATGAAAAAGATCGTCGCCTGGAAGTCGTTGCCCGAAGACGTGCTCGCGTATCTGCAGCAGCACGCGCAGGTCGTGC AGGTCGACGCCGCGCAGCAC
Product: major facilitator superfamily 2- ketogluconate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MTSSLAIRRWWTIMPIVFITYSLAYLDRANFGFASAAGINQDLGISKGLSSLIGALFFLGYFFFQIPGAIYAERRSVKKL VFWSLVLWGGCAALTGMVSNIPSLMVIRFVLGVVEAAVMPAMLIFISNWFTKSERSRANTFLILGNPVTVLWMSVVSGYL VHSFGWRHMFIAEGAPAIIWAVIWWFIVQDKPQQVSWLTQQQKDDLAETLRAEQAAIKPVRNYSEAFKTPAVIKLCAQYF CWSIGVYGFVLWLPSILKNGSTLGMVETGWLSALPYLAATIAMLAASWASDKLNRRKVFVWPFLLVGAVAFAASYALGST HFWLSYALLVIAGAAMYAPYGPFFAIVPELLPKNVAGGAMALINSMGALGSFVGSYVVGYLNGATGSPAASYAFMSVALV AAVILTLVVKPQPQALNNAPPLATPLQGK
Sequences:
>Translated_429_residues MTSSLAIRRWWTIMPIVFITYSLAYLDRANFGFASAAGINQDLGISKGLSSLIGALFFLGYFFFQIPGAIYAERRSVKKL VFWSLVLWGGCAALTGMVSNIPSLMVIRFVLGVVEAAVMPAMLIFISNWFTKSERSRANTFLILGNPVTVLWMSVVSGYL VHSFGWRHMFIAEGAPAIIWAVIWWFIVQDKPQQVSWLTQQQKDDLAETLRAEQAAIKPVRNYSEAFKTPAVIKLCAQYF CWSIGVYGFVLWLPSILKNGSTLGMVETGWLSALPYLAATIAMLAASWASDKLNRRKVFVWPFLLVGAVAFAASYALGST HFWLSYALLVIAGAAMYAPYGPFFAIVPELLPKNVAGGAMALINSMGALGSFVGSYVVGYLNGATGSPAASYAFMSVALV AAVILTLVVKPQPQALNNAPPLATPLQGK >Mature_428_residues TSSLAIRRWWTIMPIVFITYSLAYLDRANFGFASAAGINQDLGISKGLSSLIGALFFLGYFFFQIPGAIYAERRSVKKLV FWSLVLWGGCAALTGMVSNIPSLMVIRFVLGVVEAAVMPAMLIFISNWFTKSERSRANTFLILGNPVTVLWMSVVSGYLV HSFGWRHMFIAEGAPAIIWAVIWWFIVQDKPQQVSWLTQQQKDDLAETLRAEQAAIKPVRNYSEAFKTPAVIKLCAQYFC WSIGVYGFVLWLPSILKNGSTLGMVETGWLSALPYLAATIAMLAASWASDKLNRRKVFVWPFLLVGAVAFAASYALGSTH FWLSYALLVIAGAAMYAPYGPFFAIVPELLPKNVAGGAMALINSMGALGSFVGSYVVGYLNGATGSPAASYAFMSVALVA AVILTLVVKPQPQALNNAPPLATPLQGK
Specific function: Component of the tartrate utilization system and may allow entry of tartrate and tartrate dehydrogenase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI6912666, Length=245, Percent_Identity=26.1224489795918, Blast_Score=86, Evalue=9e-17, Organism=Homo sapiens, GI154350196, Length=396, Percent_Identity=22.7272727272727, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI9966811, Length=367, Percent_Identity=23.433242506812, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI9945322, Length=363, Percent_Identity=22.5895316804408, Blast_Score=72, Evalue=9e-13, Organism=Homo sapiens, GI21322234, Length=370, Percent_Identity=24.5945945945946, Blast_Score=66, Evalue=6e-11, Organism=Homo sapiens, GI148743791, Length=194, Percent_Identity=19.5876288659794, Blast_Score=66, Evalue=6e-11, Organism=Escherichia coli, GI87082071, Length=369, Percent_Identity=26.0162601626016, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI87082320, Length=423, Percent_Identity=25.7683215130024, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI1789152, Length=438, Percent_Identity=23.0593607305936, Blast_Score=102, Evalue=7e-23, Organism=Escherichia coli, GI2367379, Length=292, Percent_Identity=24.6575342465753, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1789515, Length=428, Percent_Identity=23.3644859813084, Blast_Score=90, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17560030, Length=282, Percent_Identity=24.822695035461, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17552542, Length=323, Percent_Identity=24.7678018575851, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI115533556, Length=365, Percent_Identity=24.3835616438356, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI115533554, Length=365, Percent_Identity=24.3835616438356, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI193205400, Length=273, Percent_Identity=24.9084249084249, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI86561091, Length=263, Percent_Identity=26.615969581749, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17535049, Length=431, Percent_Identity=24.3619489559165, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI25141318, Length=263, Percent_Identity=26.615969581749, Blast_Score=76, Evalue=4e-14, Organism=Caenorhabditis elegans, GI25141316, Length=263, Percent_Identity=26.615969581749, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI25141341, Length=204, Percent_Identity=27.4509803921569, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI32565916, Length=198, Percent_Identity=23.7373737373737, Blast_Score=72, Evalue=8e-13, Organism=Caenorhabditis elegans, GI32565914, Length=199, Percent_Identity=24.1206030150754, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17566884, Length=196, Percent_Identity=23.9795918367347, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17554962, Length=301, Percent_Identity=23.9202657807309, Blast_Score=66, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322612, Length=236, Percent_Identity=23.728813559322, Blast_Score=76, Evalue=9e-15, Organism=Saccharomyces cerevisiae, GI6323032, Length=237, Percent_Identity=25.3164556962025, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI24580790, Length=349, Percent_Identity=24.3553008595989, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI45550460, Length=451, Percent_Identity=23.059866962306, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI24583789, Length=412, Percent_Identity=23.0582524271845, Blast_Score=93, Evalue=4e-19, Organism=Drosophila melanogaster, GI24655255, Length=402, Percent_Identity=23.6318407960199, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24584153, Length=398, Percent_Identity=23.1155778894472, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI24655271, Length=414, Percent_Identity=23.6714975845411, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI20130135, Length=407, Percent_Identity=23.8329238329238, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI28573708, Length=258, Percent_Identity=25.5813953488372, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI28573707, Length=258, Percent_Identity=25.5813953488372, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24648416, Length=371, Percent_Identity=23.4501347708895, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI21356189, Length=371, Percent_Identity=23.4501347708895, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI28573299, Length=451, Percent_Identity=22.1729490022173, Blast_Score=76, Evalue=4e-14, Organism=Drosophila melanogaster, GI24658674, Length=286, Percent_Identity=23.0769230769231, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI62484226, Length=300, Percent_Identity=23.3333333333333, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24653727, Length=374, Percent_Identity=23.5294117647059, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24639764, Length=297, Percent_Identity=22.2222222222222, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI20129235, Length=400, Percent_Identity=24.25, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46697; Mature: 46565
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSLAIRRWWTIMPIVFITYSLAYLDRANFGFASAAGINQDLGISKGLSSLIGALFFLG CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHH YFFFQIPGAIYAERRSVKKLVFWSLVLWGGCAALTGMVSNIPSLMVIRFVLGVVEAAVMP HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AMLIFISNWFTKSERSRANTFLILGNPVTVLWMSVVSGYLVHSFGWRHMFIAEGAPAIIW HHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHH AVIWWFIVQDKPQQVSWLTQQQKDDLAETLRAEQAAIKPVRNYSEAFKTPAVIKLCAQYF HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH CWSIGVYGFVLWLPSILKNGSTLGMVETGWLSALPYLAATIAMLAASWASDKLNRRKVFV HHHHHHHHHHHHHHHHHCCCCEECEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE WPFLLVGAVAFAASYALGSTHFWLSYALLVIAGAAMYAPYGPFFAIVPELLPKNVAGGAM HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHH ALINSMGALGSFVGSYVVGYLNGATGSPAASYAFMSVALVAAVILTLVVKPQPQALNNAP HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCC PLATPLQGK CCCCCCCCC >Mature Secondary Structure TSSLAIRRWWTIMPIVFITYSLAYLDRANFGFASAAGINQDLGISKGLSSLIGALFFLG CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHH YFFFQIPGAIYAERRSVKKLVFWSLVLWGGCAALTGMVSNIPSLMVIRFVLGVVEAAVMP HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH AMLIFISNWFTKSERSRANTFLILGNPVTVLWMSVVSGYLVHSFGWRHMFIAEGAPAIIW HHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHH AVIWWFIVQDKPQQVSWLTQQQKDDLAETLRAEQAAIKPVRNYSEAFKTPAVIKLCAQYF HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH CWSIGVYGFVLWLPSILKNGSTLGMVETGWLSALPYLAATIAMLAASWASDKLNRRKVFV HHHHHHHHHHHHHHHHHCCCCEECEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE WPFLLVGAVAFAASYALGSTHFWLSYALLVIAGAAMYAPYGPFFAIVPELLPKNVAGGAM HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHH ALINSMGALGSFVGSYVVGYLNGATGSPAASYAFMSVALVAAVILTLVVKPQPQALNNAP HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCC PLATPLQGK CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7592429 [H]