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The map label for this gene is alsB [H]

Identifier: 91783815

GI number: 91783815

Start: 2722698

End: 2723660

Strand: Reverse

Name: alsB [H]

Synonym: Bxe_A1997

Alternate gene names: 91783815

Gene position: 2723660-2722698 (Counterclockwise)

Preceding gene: 91783816

Following gene: 91783814

Centisome position: 55.63

GC content: 62.72

Gene sequence:

>963_bases
ATGAGCCAACGCATTCGCCGCCGCATCCTGGTGGCTGCCGTCCTCGCCATCGCTAGCGCCGCCTTGCCGTTTTCGTCTGC
GTACGCGCAGAACGCGCCCGCCCACAAGCCGAGGGTCGCGCTGGTGATGAAGTCGCTCGCCAACGAATTTTTCCTGACTA
TGGAAACCGGCGCGAAGGACTATCAGAAGCACAATGCCTCGCAGTTCGACCTGATTACCAACGGCATCAAGGACGAGACC
GATACCGCGAACCAGATCCGCATCGTCGAGCAGATGATCGTGTCGAAGGTCGACGCGATCGTGCTGGCGCCGGCCGATTC
GAAGGCGCTGGTGCCGGTCGTCAAGAAGGCGGTGGATGCGGGCATCATCGTCGTGAATATCGACAACCGGCTCGATCCGG
ACGTGCTCAGGTCGAAAGACCTGAACGTGCCGTTCGTCGGCCCGGATAACCGCAAGGGTGCGCAGAAGGTCGGCGATTAC
CTGGCCAGAAAGCTCAAGGCGGGCGACGAGGTCGGCATTATCGAAGGCGTGTCGACCACCACCAACGCGCAGCAGCGCAC
CGCGGGTTTCAGGGACGCGATGCAGAAGGTCGGCGCGAAGGTCGTCTCGGTGCAATCGGGTGAATGGGAAATCGACAAGG
GCAACGCGGTCGCTTCGGCCATGCTCAACGAATACCCGAACCTGAAGGCGCTCCTCGCGGGCAACGACAACATGGCGATC
GGCGCGGTCTCGGCCGTGCGCGCGGCCGGCAAGCAGGGCAAGGTGCTGGTGGTCGGCTACGACAACATCAACGCGATCAG
GCCGATGCTCAAGGACGGCCGCGTGCTCGCCACCGCGGATCAGTATGCGGCCAAGCAGGCCGTGTTCGGTATCGACACCG
CGCTGAAGGCGTTGAGCGAGCACAAGAAGCAGTCCGATCTTTCCGGCGTGGTGGAAACGCCGTGCGATCTGATCACGAAG
TAG

Upstream 100 bases:

>100_bases
CTGCGCTGAGAATGAGCCTCGCAAACGTTTGCGCGCCATTAAAACGCACTAATTAAAAAATAAGGCTCCGCAGCGAGCCT
GCCAGACCCTGGAGATATGC

Downstream 100 bases:

>100_bases
GCATCGCCCGGTGAGTGCCGGGGTAAGTGCGTACGCAGGCCGGTGTCAGTGCATGTCTGCTGCGCGCTGCATGAGATGCG
CGCACCGACTTGCGTCTATT

Product: ABC ribose transporter, periplasmic ligand binding protein

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: ALBP [H]

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MSQRIRRRILVAAVLAIASAALPFSSAYAQNAPAHKPRVALVMKSLANEFFLTMETGAKDYQKHNASQFDLITNGIKDET
DTANQIRIVEQMIVSKVDAIVLAPADSKALVPVVKKAVDAGIIVVNIDNRLDPDVLRSKDLNVPFVGPDNRKGAQKVGDY
LARKLKAGDEVGIIEGVSTTTNAQQRTAGFRDAMQKVGAKVVSVQSGEWEIDKGNAVASAMLNEYPNLKALLAGNDNMAI
GAVSAVRAAGKQGKVLVVGYDNINAIRPMLKDGRVLATADQYAAKQAVFGIDTALKALSEHKKQSDLSGVVETPCDLITK

Sequences:

>Translated_320_residues
MSQRIRRRILVAAVLAIASAALPFSSAYAQNAPAHKPRVALVMKSLANEFFLTMETGAKDYQKHNASQFDLITNGIKDET
DTANQIRIVEQMIVSKVDAIVLAPADSKALVPVVKKAVDAGIIVVNIDNRLDPDVLRSKDLNVPFVGPDNRKGAQKVGDY
LARKLKAGDEVGIIEGVSTTTNAQQRTAGFRDAMQKVGAKVVSVQSGEWEIDKGNAVASAMLNEYPNLKALLAGNDNMAI
GAVSAVRAAGKQGKVLVVGYDNINAIRPMLKDGRVLATADQYAAKQAVFGIDTALKALSEHKKQSDLSGVVETPCDLITK
>Mature_319_residues
SQRIRRRILVAAVLAIASAALPFSSAYAQNAPAHKPRVALVMKSLANEFFLTMETGAKDYQKHNASQFDLITNGIKDETD
TANQIRIVEQMIVSKVDAIVLAPADSKALVPVVKKAVDAGIIVVNIDNRLDPDVLRSKDLNVPFVGPDNRKGAQKVGDYL
ARKLKAGDEVGIIEGVSTTTNAQQRTAGFRDAMQKVGAKVVSVQSGEWEIDKGNAVASAMLNEYPNLKALLAGNDNMAIG
AVSAVRAAGKQGKVLVVGYDNINAIRPMLKDGRVLATADQYAAKQAVFGIDTALKALSEHKKQSDLSGVVETPCDLITK

Specific function: Part of the binding-protein-dependent transport system AlsBAC for D-allose [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790526, Length=255, Percent_Identity=35.6862745098039, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1790192, Length=303, Percent_Identity=29.7029702970297, Blast_Score=114, Evalue=8e-27,
Organism=Escherichia coli, GI1790674, Length=205, Percent_Identity=31.219512195122, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1788898, Length=282, Percent_Identity=26.241134751773, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 34176; Mature: 34045

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQRIRRRILVAAVLAIASAALPFSSAYAQNAPAHKPRVALVMKSLANEFFLTMETGAKD
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHEEEEEECCCHH
YQKHNASQFDLITNGIKDETDTANQIRIVEQMIVSKVDAIVLAPADSKALVPVVKKAVDA
HHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHCC
GIIVVNIDNRLDPDVLRSKDLNVPFVGPDNRKGAQKVGDYLARKLKAGDEVGIIEGVSTT
CEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCC
TNAQQRTAGFRDAMQKVGAKVVSVQSGEWEIDKGNAVASAMLNEYPNLKALLAGNDNMAI
CCHHHHHHHHHHHHHHHCCEEEEEECCCEEECCCHHHHHHHHHCCCCCEEEEECCCCCCH
GAVSAVRAAGKQGKVLVVGYDNINAIRPMLKDGRVLATADQYAAKQAVFGIDTALKALSE
HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
HKKQSDLSGVVETPCDLITK
HHHHHHHCHHHHCCHHHHCC
>Mature Secondary Structure 
SQRIRRRILVAAVLAIASAALPFSSAYAQNAPAHKPRVALVMKSLANEFFLTMETGAKD
CHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHEEEEEECCCHH
YQKHNASQFDLITNGIKDETDTANQIRIVEQMIVSKVDAIVLAPADSKALVPVVKKAVDA
HHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHCC
GIIVVNIDNRLDPDVLRSKDLNVPFVGPDNRKGAQKVGDYLARKLKAGDEVGIIEGVSTT
CEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCC
TNAQQRTAGFRDAMQKVGAKVVSVQSGEWEIDKGNAVASAMLNEYPNLKALLAGNDNMAI
CCHHHHHHHHHHHHHHHCCEEEEEECCCEEECCCHHHHHHHHHCCCCCEEEEECCCCCCH
GAVSAVRAAGKQGKVLVVGYDNINAIRPMLKDGRVLATADQYAAKQAVFGIDTALKALSE
HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
HKKQSDLSGVVETPCDLITK
HHHHHHHCHHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 8576032; 9401019; 10064713 [H]