Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

Click here to switch to the map view.

The map label for this gene is yflP [H]

Identifier: 91783767

GI number: 91783767

Start: 2663525

End: 2664523

Strand: Reverse

Name: yflP [H]

Synonym: Bxe_A2047

Alternate gene names: 91783767

Gene position: 2664523-2663525 (Counterclockwise)

Preceding gene: 91783768

Following gene: 91783766

Centisome position: 54.42

GC content: 63.16

Gene sequence:

>999_bases
ATGAGGAGGAGGCTTGAGATATCAGGTGTCGCGCGTGGCATCTGTGTCGTGCTGCTATCGGCGTGCGCGACGCTGGCGAG
CGCCGCGGACACGTGGCAGCCCCGACGGCCGGTCGAGATCGTGGTGCCGAGCGCGCCTGGTGGAGGACTCGATCTGGTTG
CCCGCACGCTGCAGAGCGTCATTCAGCAGGAGAAGCTGTCGCCCCGGCCCGTTACGGTCATCAACCGGCCTGGCGGAGGC
GGCACGGTCAGTATCGCGTACATCAATTCACACGAAGGCGACGGCCACTTTGTCACGGTAGAGGCGCTGCCGCTGATCAC
CAACCGGATTACGGGCCTTTCCACGGTAGGTATCGACGACGTGACGCCGCTTGCCGTGTTCGTGACCGAGCAGGTGGTGT
TCTCGGTGCCGGGCAATTCGCCGATCAAGTCGGGCAGCGATCTCGTGCAGATGCTCAAGAAAGATCCCACCAGCGTCACG
CTGGGCGTGTCGAGTTCGCCGGGCGGTCAGAGTCACGACGCCGCGGCGCTCGTGATGAAAGGCGCCGGCCAGGATCCGAA
GAAAATCAAAGTCGTATTTTTCGATTCAGGCGGTGAAGCGTTGACGGCGTTGATGGGCGGCCACGTAACGGCTGCCGCGA
CGCCTGCGGGCGTGGTGTTGGGACCGAGCAAGTCCGGCGCGGTGCGCATGATTGCGATTCCCGCCGGCGCGCGTCAGGGC
GGCGAACTGGCAGGCGTGCCGACGTGGAAGGAGCAGGGCATCAATGTGGACTTTACGACCTGGCGCGTGCTGGTCGGTCC
GAAGAACATGACGGCCGCCGAAATAGCGTGGTGGGACAACGTATTGCAGAAGGCTACCTCGTCGCCGGAGTGGGCCGTGG
CCGTGAAACGGAATCTTTGGACTGCAGACTATAAAAACAGCACTCAGACCCGTGCATTTCTTCAGGACGAGCGCAATCGC
CTGACCCCTCTGCTTGGCGAGCTTGGCATCGCGAAGTAG

Upstream 100 bases:

>100_bases
TCCAGAACGAGGTGCCAATGGAAAGCCTCTTCGCCGCCAGTACATTCGACGCATTCAATTTCTAAACGGCCACAGAGCAC
TATAAACAGGAGACGAAGTG

Downstream 100 bases:

>100_bases
CGAATCTTTCTTCCAACCCGCAGTACCTATCGACATGGAGATCCATATGTCACGCATCGTTCACCTCGCAGTCAAGGTCG
ACGACCTCGAACAGGCGACC

Product: tricarboxylic transporter, periplasmic ligand binding protein, TctC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MRRRLEISGVARGICVVLLSACATLASAADTWQPRRPVEIVVPSAPGGGLDLVARTLQSVIQQEKLSPRPVTVINRPGGG
GTVSIAYINSHEGDGHFVTVEALPLITNRITGLSTVGIDDVTPLAVFVTEQVVFSVPGNSPIKSGSDLVQMLKKDPTSVT
LGVSSSPGGQSHDAAALVMKGAGQDPKKIKVVFFDSGGEALTALMGGHVTAAATPAGVVLGPSKSGAVRMIAIPAGARQG
GELAGVPTWKEQGINVDFTTWRVLVGPKNMTAAEIAWWDNVLQKATSSPEWAVAVKRNLWTADYKNSTQTRAFLQDERNR
LTPLLGELGIAK

Sequences:

>Translated_332_residues
MRRRLEISGVARGICVVLLSACATLASAADTWQPRRPVEIVVPSAPGGGLDLVARTLQSVIQQEKLSPRPVTVINRPGGG
GTVSIAYINSHEGDGHFVTVEALPLITNRITGLSTVGIDDVTPLAVFVTEQVVFSVPGNSPIKSGSDLVQMLKKDPTSVT
LGVSSSPGGQSHDAAALVMKGAGQDPKKIKVVFFDSGGEALTALMGGHVTAAATPAGVVLGPSKSGAVRMIAIPAGARQG
GELAGVPTWKEQGINVDFTTWRVLVGPKNMTAAEIAWWDNVLQKATSSPEWAVAVKRNLWTADYKNSTQTRAFLQDERNR
LTPLLGELGIAK
>Mature_332_residues
MRRRLEISGVARGICVVLLSACATLASAADTWQPRRPVEIVVPSAPGGGLDLVARTLQSVIQQEKLSPRPVTVINRPGGG
GTVSIAYINSHEGDGHFVTVEALPLITNRITGLSTVGIDDVTPLAVFVTEQVVFSVPGNSPIKSGSDLVQMLKKDPTSVT
LGVSSSPGGQSHDAAALVMKGAGQDPKKIKVVFFDSGGEALTALMGGHVTAAATPAGVVLGPSKSGAVRMIAIPAGARQG
GELAGVPTWKEQGINVDFTTWRVLVGPKNMTAAEIAWWDNVLQKATSSPEWAVAVKRNLWTADYKNSTQTRAFLQDERNR
LTPLLGELGIAK

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34796; Mature: 34796

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRLEISGVARGICVVLLSACATLASAADTWQPRRPVEIVVPSAPGGGLDLVARTLQSV
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHH
IQQEKLSPRPVTVINRPGGGGTVSIAYINSHEGDGHFVTVEALPLITNRITGLSTVGIDD
HHHHCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCEEEEEEEEHHHHHCCCCEECCCCC
VTPLAVFVTEQVVFSVPGNSPIKSGSDLVQMLKKDPTSVTLGVSSSPGGQSHDAAALVMK
CCHHEEEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEE
GAGQDPKKIKVVFFDSGGEALTALMGGHVTAAATPAGVVLGPSKSGAVRMIAIPAGARQG
CCCCCCCEEEEEEECCCCHHHHHHHCCCEEEECCCCEEEECCCCCCCEEEEEECCCCCCC
GELAGVPTWKEQGINVDFTTWRVLVGPKNMTAAEIAWWDNVLQKATSSPEWAVAVKRNLW
CCCCCCCCHHHCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCEE
TADYKNSTQTRAFLQDERNRLTPLLGELGIAK
ECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRRRLEISGVARGICVVLLSACATLASAADTWQPRRPVEIVVPSAPGGGLDLVARTLQSV
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHH
IQQEKLSPRPVTVINRPGGGGTVSIAYINSHEGDGHFVTVEALPLITNRITGLSTVGIDD
HHHHCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCEEEEEEEEHHHHHCCCCEECCCCC
VTPLAVFVTEQVVFSVPGNSPIKSGSDLVQMLKKDPTSVTLGVSSSPGGQSHDAAALVMK
CCHHEEEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEE
GAGQDPKKIKVVFFDSGGEALTALMGGHVTAAATPAGVVLGPSKSGAVRMIAIPAGARQG
CCCCCCCEEEEEEECCCCHHHHHHHCCCEEEECCCCEEEECCCCCCCEEEEEECCCCCCC
GELAGVPTWKEQGINVDFTTWRVLVGPKNMTAAEIAWWDNVLQKATSSPEWAVAVKRNLW
CCCCCCCCHHHCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCEE
TADYKNSTQTRAFLQDERNRLTPLLGELGIAK
ECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]