| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is phtD [H]
Identifier: 91783768
GI number: 91783768
Start: 2664559
End: 2665542
Strand: Reverse
Name: phtD [H]
Synonym: Bxe_A2046
Alternate gene names: 91783768
Gene position: 2665542-2664559 (Counterclockwise)
Preceding gene: 91783769
Following gene: 91783767
Centisome position: 54.45
GC content: 61.48
Gene sequence:
>984_bases ATGCTTGAACTATCGCTGGCTTGCCAGGTTACGGACCGCACACGTGCGCTGATCGACGGAAAAGCCGTGATCGACGGCTG CCGGATCAACTTCGTGAATGGGCCCGCCGAAGAGCTCTTTCAACGCGCGTTCCGTCATGGCGAATTCGATATATCGGAGC TGTCGCTCGGCACGCACCTGCTGACTACCGCTCGTGGGCAAAGCAGTTATATCGGTGTGCCGGTGTTCCTGTCGCGCTCG TTCCGTCATTCGGCGATCTATATCCGTACCGATCGCGGCATCGATTCCCCGCAAGCGCTAAAAGGCCGTCGTATCGGCGT GCCCGACTTTCAGCAGACGGCGGGAATCTGGGCGCGCGGCATGCTCGCGGACGAATACGGCGTTCGCAGCCGCGACGTGC AGTGGAGGGTCGGCGGTCTCGAACAGACCGGCCGCGAGGCGCGCGTGCCGTACAACCTCGCGCCCGCTATTCAGGTGGAG CCGATCGCCTCGGACCAGACGCTCGCGCGCCTGCTCGACGAAGGAGAGATCGACGCGGTGATCGCGCCGAAACCGCCTTC GTGCTTCGGCCGCAATGAACACGTGCAGCGTCTTTTTCCCACCTTCCGCGAAGACGAGGAGACGTGGTTCCGGAAAACGC GACTCTTCCCGCCCATGCATGTGGTCGGCATTCGCCGCTCGCTCGTCGAGCAGCATCCGTGGCTGCCGGTCAATGTGTTT GCCGCGTTCAGGAAGTCGCGCGATATCGCGCTCGACGAACTCGCGATAACCGACACGCTGCGCGTCATGCATCCGTGGCT CACGTCCGAATACGAGCGCGTCAAATCGCTGATGGGGGTGGACTACTGGCGCTACGGTCTGAAAGAGAACCGTCTCGACC TCGACACGTTGCAGCGTTATGCGAAGAGCGACGGGCTGATCCAGAACGAGGTGCCAATGGAAAGCCTCTTCGCCGCCAGT ACATTCGACGCATTCAATTTCTAA
Upstream 100 bases:
>100_bases GCATGATTATTATTTTGCAGTACGAATTACGGAGGCGGATCGATGCTCGTTTTCAAGTACCGGTCCCCAGTTTTCATATT AGCCTACGGTGCTTTTCTCT
Downstream 100 bases:
>100_bases ACGGCCACAGAGCACTATAAACAGGAGACGAAGTGATGAGGAGGAGGCTTGAGATATCAGGTGTCGCGCGTGGCATCTGT GTCGTGCTGCTATCGGCGTG
Product: 4,5-dihydroxyphthalate decarboxylase (OhpC)
Products: NA
Alternate protein names: DHP decarboxylase [H]
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MLELSLACQVTDRTRALIDGKAVIDGCRINFVNGPAEELFQRAFRHGEFDISELSLGTHLLTTARGQSSYIGVPVFLSRS FRHSAIYIRTDRGIDSPQALKGRRIGVPDFQQTAGIWARGMLADEYGVRSRDVQWRVGGLEQTGREARVPYNLAPAIQVE PIASDQTLARLLDEGEIDAVIAPKPPSCFGRNEHVQRLFPTFREDEETWFRKTRLFPPMHVVGIRRSLVEQHPWLPVNVF AAFRKSRDIALDELAITDTLRVMHPWLTSEYERVKSLMGVDYWRYGLKENRLDLDTLQRYAKSDGLIQNEVPMESLFAAS TFDAFNF
Sequences:
>Translated_327_residues MLELSLACQVTDRTRALIDGKAVIDGCRINFVNGPAEELFQRAFRHGEFDISELSLGTHLLTTARGQSSYIGVPVFLSRS FRHSAIYIRTDRGIDSPQALKGRRIGVPDFQQTAGIWARGMLADEYGVRSRDVQWRVGGLEQTGREARVPYNLAPAIQVE PIASDQTLARLLDEGEIDAVIAPKPPSCFGRNEHVQRLFPTFREDEETWFRKTRLFPPMHVVGIRRSLVEQHPWLPVNVF AAFRKSRDIALDELAITDTLRVMHPWLTSEYERVKSLMGVDYWRYGLKENRLDLDTLQRYAKSDGLIQNEVPMESLFAAS TFDAFNF >Mature_327_residues MLELSLACQVTDRTRALIDGKAVIDGCRINFVNGPAEELFQRAFRHGEFDISELSLGTHLLTTARGQSSYIGVPVFLSRS FRHSAIYIRTDRGIDSPQALKGRRIGVPDFQQTAGIWARGMLADEYGVRSRDVQWRVGGLEQTGREARVPYNLAPAIQVE PIASDQTLARLLDEGEIDAVIAPKPPSCFGRNEHVQRLFPTFREDEETWFRKTRLFPPMHVVGIRRSLVEQHPWLPVNVF AAFRKSRDIALDELAITDTLRVMHPWLTSEYERVKSLMGVDYWRYGLKENRLDLDTLQRYAKSDGLIQNEVPMESLFAAS TFDAFNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To P.putida DHP decarboxylase [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: =4.1.1.55 [H]
Molecular weight: Translated: 37257; Mature: 37257
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLELSLACQVTDRTRALIDGKAVIDGCRINFVNGPAEELFQRAFRHGEFDISELSLGTHL CEEEEEEEEECCHHHHHCCCCEEEECEEEEECCCCHHHHHHHHHHCCCCCHHHHHHCHHH LTTARGQSSYIGVPVFLSRSFRHSAIYIRTDRGIDSPQALKGRRIGVPDFQQTAGIWARG EEECCCCCCEECCHHHCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHC MLADEYGVRSRDVQWRVGGLEQTGREARVPYNLAPAIQVEPIASDQTLARLLDEGEIDAV CCHHHCCCCCCCCEEEECCHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCEE IAPKPPSCFGRNEHVQRLFPTFREDEETWFRKTRLFPPMHVVGIRRSLVEQHPWLPVNVF ECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHH AAFRKSRDIALDELAITDTLRVMHPWLTSEYERVKSLMGVDYWRYGLKENRLDLDTLQRY HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHH AKSDGLIQNEVPMESLFAASTFDAFNF HHCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MLELSLACQVTDRTRALIDGKAVIDGCRINFVNGPAEELFQRAFRHGEFDISELSLGTHL CEEEEEEEEECCHHHHHCCCCEEEECEEEEECCCCHHHHHHHHHHCCCCCHHHHHHCHHH LTTARGQSSYIGVPVFLSRSFRHSAIYIRTDRGIDSPQALKGRRIGVPDFQQTAGIWARG EEECCCCCCEECCHHHCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHC MLADEYGVRSRDVQWRVGGLEQTGREARVPYNLAPAIQVEPIASDQTLARLLDEGEIDAV CCHHHCCCCCCCCEEEECCHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCEE IAPKPPSCFGRNEHVQRLFPTFREDEETWFRKTRLFPPMHVVGIRRSLVEQHPWLPVNVF ECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHH AAFRKSRDIALDELAITDTLRVMHPWLTSEYERVKSLMGVDYWRYGLKENRLDLDTLQRY HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHH AKSDGLIQNEVPMESLFAASTFDAFNF HHCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA