| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yacH [H]
Identifier: 91783685
GI number: 91783685
Start: 2569643
End: 2570929
Strand: Direct
Name: yacH [H]
Synonym: Bxe_A2129
Alternate gene names: 91783685
Gene position: 2569643-2570929 (Clockwise)
Preceding gene: 91783683
Following gene: 91783686
Centisome position: 52.49
GC content: 66.2
Gene sequence:
>1287_bases TTGAGCGTACTGGCGGGCTCGCCATTCCTGCTCGCGGTCGTGGCGCCCGCCGCCTACGCACAAGCGCCGGCAAAAATCTC GAACCAGCAGTTGGACTCGCTGACCGCGCCGATCGCGCTCTACCCGGACGCCCTCCTCGCCCAGGTGCTGATGGCATCCA CCTTTCCGCAAGACGTGCCGTCGGCGGCGGCGTGGTCGAAAGCCAATCCGAACCTCAAGGGTGACGACGCCGTGAAGGCG GTCGCGGCAGAGCCGTGGGATCCGAGCGTGCAATCGCTGGTGGCGTTCCCGCAGGTGCTGGCCACGATGGCGTCGAAACC CGACTGGGTGGCGCAACTGGGCAATGCCTTCCTCGCGCAGCCGAACGACGTGATGGACTCCGTGCAACGCTTGCGCAAAC AGGCCCAGCAGGCGGGCAACCTGCAGACTAACCAGCAGCAGAAAGTCGTCGTCGAGCAGAGCACCATTCAGATCGTGCCG GTGAACCCGCAGGTCGTCTACGTGCCAACGTATAACCCCACGGTCGTCTACGGCACGTGGCCATATCCGGCCTACCCACC CGTATACGTGCCGCCCCCGCCGGGCTATGCGGTGGCGAGCGGGCTCGCCGCGGGACTCGCGTTCGGCGCTGGCGTTGCGA TTACCAGCTCGCTGTGGAGCAACGTCAACTGGAACAATCACAGCGTCAATATCAACGTCAACCAGTACAACAACATCAAT GTGAATCACCGGCTCGACGTAAACAGCAGCACGACGAACTGGAACCGCAATTCGACTTTCAATCGCAATACCTCGGCCAA CGTGGGCAGCGCGCAGCGAGACGCGTATCGCGGGCGTGATACATCGGCCTCGCGTGCGCAGGCGCAGCAGACCTTGCAGA ACCGTACCGGCCAGAACATGGGCGGCACGGCAAGTCAGCGTCTGCAGGGTATCCAGCAAGGCGGCAACAATGCGGCCAAC CTTCGCAACAACGCGCAGAACGTGAACCGCGACAACGCGCTGCGCGGCGCGGGAGACGGCGGCGCCGCGAAACAGGATAT GCAACGCGGGCAAGCAAGCCGGCAGTCGCTCGCGAACAACCGCGGCGGCGGTCCCGGCGCGAACGGCGGCGGTCAGCAAC GTGGCGGCAATCTGGGAGCGGGGGGCAGTGGCGAGCGCGCCAGCTTCGGCGCAGGCGGTGGTGGACAACCAGGCGGCGGC TTTGGCGCGGGCGGTGGCGGACAACAGCGCGGCGGCGGGCTGGGTGCGGGCGGTGGCGGCCAGCGTCACTTCGGCCGGCA ACATTGA
Upstream 100 bases:
>100_bases GCAGCAGTTCGCTGCACCATATACAACTTCCAACAGGGGAGACTTGATCGTGAAACGCTCCAGGGCATACCAGAGAAGAT CGCGGATTCTTATAGTCACA
Downstream 100 bases:
>100_bases ACCGATCTCACAGGAGCCGCTCATGATCCGTATCCGTACCTTCCAGACCTTCGGCGCACGTGTTGCCGACACGCTTGCAC ACGCCCTCGCCTGCGCTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MSVLAGSPFLLAVVAPAAYAQAPAKISNQQLDSLTAPIALYPDALLAQVLMASTFPQDVPSAAAWSKANPNLKGDDAVKA VAAEPWDPSVQSLVAFPQVLATMASKPDWVAQLGNAFLAQPNDVMDSVQRLRKQAQQAGNLQTNQQQKVVVEQSTIQIVP VNPQVVYVPTYNPTVVYGTWPYPAYPPVYVPPPPGYAVASGLAAGLAFGAGVAITSSLWSNVNWNNHSVNINVNQYNNIN VNHRLDVNSSTTNWNRNSTFNRNTSANVGSAQRDAYRGRDTSASRAQAQQTLQNRTGQNMGGTASQRLQGIQQGGNNAAN LRNNAQNVNRDNALRGAGDGGAAKQDMQRGQASRQSLANNRGGGPGANGGGQQRGGNLGAGGSGERASFGAGGGGQPGGG FGAGGGGQQRGGGLGAGGGGQRHFGRQH
Sequences:
>Translated_428_residues MSVLAGSPFLLAVVAPAAYAQAPAKISNQQLDSLTAPIALYPDALLAQVLMASTFPQDVPSAAAWSKANPNLKGDDAVKA VAAEPWDPSVQSLVAFPQVLATMASKPDWVAQLGNAFLAQPNDVMDSVQRLRKQAQQAGNLQTNQQQKVVVEQSTIQIVP VNPQVVYVPTYNPTVVYGTWPYPAYPPVYVPPPPGYAVASGLAAGLAFGAGVAITSSLWSNVNWNNHSVNINVNQYNNIN VNHRLDVNSSTTNWNRNSTFNRNTSANVGSAQRDAYRGRDTSASRAQAQQTLQNRTGQNMGGTASQRLQGIQQGGNNAAN LRNNAQNVNRDNALRGAGDGGAAKQDMQRGQASRQSLANNRGGGPGANGGGQQRGGNLGAGGSGERASFGAGGGGQPGGG FGAGGGGQQRGGGLGAGGGGQRHFGRQH >Mature_427_residues SVLAGSPFLLAVVAPAAYAQAPAKISNQQLDSLTAPIALYPDALLAQVLMASTFPQDVPSAAAWSKANPNLKGDDAVKAV AAEPWDPSVQSLVAFPQVLATMASKPDWVAQLGNAFLAQPNDVMDSVQRLRKQAQQAGNLQTNQQQKVVVEQSTIQIVPV NPQVVYVPTYNPTVVYGTWPYPAYPPVYVPPPPGYAVASGLAAGLAFGAGVAITSSLWSNVNWNNHSVNINVNQYNNINV NHRLDVNSSTTNWNRNSTFNRNTSANVGSAQRDAYRGRDTSASRAQAQQTLQNRTGQNMGGTASQRLQGIQQGGNNAANL RNNAQNVNRDNALRGAGDGGAAKQDMQRGQASRQSLANNRGGGPGANGGGQQRGGNLGAGGSGERASFGAGGGGQPGGGF GAGGGGQQRGGGLGAGGGGQRHFGRQH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786308, Length=309, Percent_Identity=41.747572815534, Blast_Score=223, Evalue=1e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021728 [H]
Pfam domain/function: PF11737 DUF3300 [H]
EC number: NA
Molecular weight: Translated: 44240; Mature: 44109
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLAGSPFLLAVVAPAAYAQAPAKISNQQLDSLTAPIALYPDALLAQVLMASTFPQDVP CCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHCCCCCCC SAAAWSKANPNLKGDDAVKAVAAEPWDPSVQSLVAFPQVLATMASKPDWVAQLGNAFLAQ CHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC PNDVMDSVQRLRKQAQQAGNLQTNQQQKVVVEQSTIQIVPVNPQVVYVPTYNPTVVYGTW CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECEEEEEECCCEEEEEECCCCEEEEECC PYPAYPPVYVPPPPGYAVASGLAAGLAFGAGVAITSSLWSNVNWNNHSVNINVNQYNNIN CCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC VNHRLDVNSSTTNWNRNSTFNRNTSANVGSAQRDAYRGRDTSASRAQAQQTLQNRTGQNM CCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC GGTASQRLQGIQQGGNNAANLRNNAQNVNRDNALRGAGDGGAAKQDMQRGQASRQSLANN CCHHHHHHHHHHHCCCCHHHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC RGGGPGANGGGQQRGGNLGAGGSGERASFGAGGGGQPGGGFGAGGGGQQRGGGLGAGGGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QRHFGRQH CCCCCCCC >Mature Secondary Structure SVLAGSPFLLAVVAPAAYAQAPAKISNQQLDSLTAPIALYPDALLAQVLMASTFPQDVP CCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHCCCCCCC SAAAWSKANPNLKGDDAVKAVAAEPWDPSVQSLVAFPQVLATMASKPDWVAQLGNAFLAQ CHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC PNDVMDSVQRLRKQAQQAGNLQTNQQQKVVVEQSTIQIVPVNPQVVYVPTYNPTVVYGTW CHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECEEEEEECCCEEEEEECCCCEEEEECC PYPAYPPVYVPPPPGYAVASGLAAGLAFGAGVAITSSLWSNVNWNNHSVNINVNQYNNIN CCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC VNHRLDVNSSTTNWNRNSTFNRNTSANVGSAQRDAYRGRDTSASRAQAQQTLQNRTGQNM CCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC GGTASQRLQGIQQGGNNAANLRNNAQNVNRDNALRGAGDGGAAKQDMQRGQASRQSLANN CCHHHHHHHHHHHCCCCHHHHCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC RGGGPGANGGGQQRGGNLGAGGSGERASFGAGGGGQPGGGFGAGGGGQQRGGGLGAGGGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QRHFGRQH CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8202364; 9278503 [H]