Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is speE [H]

Identifier: 91783683

GI number: 91783683

Start: 2565650

End: 2568142

Strand: Direct

Name: speE [H]

Synonym: Bxe_A2131

Alternate gene names: 91783683

Gene position: 2565650-2568142 (Clockwise)

Preceding gene: 91783682

Following gene: 91783685

Centisome position: 52.4

GC content: 67.27

Gene sequence:

>2493_bases
ATGCTCCTGCTGTTTGCATCGGGCGCGGCGTCACTGATTTACCAGGTGCTGTGGATCAAACAATTAGCGCTCGTCGTGGG
TGTGGACGTACAGGCGGTCACGACGGGCGTCAGCGCCTTTTTCGCAGGTCTCGCGCTGGGTGGCTGGCTGCTCGGCAGGC
TGGCCGATCGCCTCTCGCGGCCGTTGCTGCTTTACGCCGCACTGGAAAGCGGCGCGATGGTGCTGGCCGTGGCCGGCACC
ATCGCGCTGGCGCACGCGGCCGCGCCGTTCGCATGGCTGCAGGATCGCACGGGGCCGCTTGCGTGGGTGTTGCCGTTCGC
ACTGGTCGGCCTGCCCGCCGTGCTGATGGGCGGCACGCTGCCGGTGCTGATGCGCGCGTTGGGCCCGCGTGCGACACGCC
TGGGCCGCGCCGGCGCACGCTTGTATGCGGCCAATACGGGTGGCGCGATCGCCGGTACGCTCGCTGCCGCCTTCATACTG
ATTCCGTTACTCGGCGTACAAGGCAGCGCGTTTGCCGCGGCCGGGTTGAACGCGCTCGCCGCGCTGAGCGCGCTGCTCAT
TAGCCATTTCACTTCCGATCGCGATCCCGCCGTTATACCGCCACTCGAAACGCCGCCACTCGAAACACCCTCTCCAGCCG
GAACAACTTCCGACCATGCCACGCCCGGCGCTCGCCTCGTCGTCGCTCTCTATGCGCTAGCCGGTGGCATCGCGCTGGGT
TACGAGGTGGTGTGGTCGCAACTGATCGTCCAGTTCATCAGCACCCGCAGCTTCGCGTTCGCGATCGTGCTCGCCACGTA
TCTGCTCGGGCTCACACTCGGCAGCGCGCTCAGCTCGCGCCGTGTCGATCGCGCGCGCGATCCGTGGGGTGTGTTCGCGC
TGCTGATCGTAGCGGCCGGACTTGTCGCGTTGCTGCAAGTCGCCGCGTTGGGTGGCTGGCTGCTTCAATGGCAAAGCCTT
GCGCGCGAGGCGACGTTCTCCGCCACTGGCAGCCTGCTCGCCGCGATGTGCGCGGGCTTTGCGGTCGCGGCCGCGTGCAT
CGTATTCGTGCCCACGCTATTGCTGGGTGCGGCGTTCCCATTCGCGCTGCGCGTGAGCGTGGATGCGCGGCATACAGGCC
GCGATGTCGGCGCCGTAGTGGCGCTCAATACCGCGGGCGGTATCGCCGGCACGCTGCTCGCCGGCTTCCTGCTGGTTCCA
GCCCTCGGGCTGGTGCATGCGCTAGCCGTGCTCGCCGTCCTGGCCGGCGCGGTGGGCGTTGTCGCCGTGTGGCGAGGTCA
TGGCGTGCGGCGCGGCACTCGCTGGAGCGTCCCGGTGCTTGCTATGGCAACCCTGTGCGCCGTGCTGCTGACACCGTCGG
ACCGTTTCGCCACCCTGCTCGCCGCGGCACGCGGCGGCACGCTGCTCTCCTACGAGGAAAGCGCGGGCGGCACCGTGGCC
GTCGTTACCCAAGGCGCGGGCGACAAACAGTTCCGGCGTCTCTACATTCAGGGAGTCTCCAACTCCGGCGACGCGATGAC
CTCGCTGCGCTATATGCGTCTGCAGGCATTGCTGCCACTGCTGGTTCACCGCGACACGCCGCGCAGCGCGCTTGTAATCG
GACTCGGTACGGGCATCACGGGCGGTGCGCTGCTCACGTGGCCCGGCCTCGACAAGCGCGTGGTCGCCGAGTTGTTGCCG
GCGGTCGTGCACGCCGCGCCGCAGTTCAAAGGCAACTACGGCATCAACGCCGACCCGCGTGTCGATATCCGCCTGCGCGA
CGGGCGGCGCGAACTGCTGCGCAGCAGCGAACGATATGACCTGATCACACTCGAGCCGCCGCCCCCCTCGGCAGCCGGCG
TGGTCAATCTCTACTCGTCGGACTTCTACCGATTGGCGGCCTCGCGTCTGAGCACGAATGGCGTTGTTGCGCAATGGCTG
CCGCTACCCACCCAGAACGAAGACGACACGCGTTCGCTGATCCAGAGCTTCATCCAGGTGTTTCCGTATGCCGCGCTATG
GACCACCGAGTTGCACGAGATGATGCTGATCGGTTCAATGCAGCCAATCGAACTGGATGTGCCGCGTATCGAGTCGCGCT
TTGCGCAACCGCAGGTGGCGGCGGCACTGCGCGAGGTGGGCGTGGCCTCGCCGGCAGCACTGCTGGCGACCTGGATCACC
GATCGCGCAGGACTCGCTTATTACACCGCAGATGCCCCGCCGGTAACCGACGACAGGCCACGCATCGAATACGCGGCGTG
GGTGCGCCGCGACGGTTTCCCGGACACGCTCACGCACCTGCTAGCGCTTCGCGGCGAGCCGCCATTGCTGCACGCCGACA
GGGCATTCCGCGCGGCCCTGGACGCCGAGCGCGGCGCGCTGCAAAGTTTCTATGCAGCGGGCCTGGACGCGTACCGCGGC
GAGCGTGATACGTGGTCTCGCGACATTGGCGATGCATTGCAGGCACAGCCGGATAATCCCTACTTCCGCTGGTTCGTCGG
CAACGAACCGTAG

Upstream 100 bases:

>100_bases
ACGTCAGGCCGATCCGCGCGAAAGCGGACGCGAACGCGAACGCGGCCCGCACGAGCCGGATGGGACCTCTGCTGAACCGT
CTCTGTCCGTTGCCTGGCCA

Downstream 100 bases:

>100_bases
CGGTGGATAAGTGCGCTTCGCGCGCGCGTCCGCCAATCGACATTCAACGGGTATTCAACGCCGGACATAACGGAGCAGAA
CAGCAGAACAACGGGCGACA

Product: spermine/spermidine synthase family transmembrane protein

Products: NA

Alternate protein names: Putrescine aminopropyltransferase; PAPT; SPDSY [H]

Number of amino acids: Translated: 830; Mature: 830

Protein sequence:

>830_residues
MLLLFASGAASLIYQVLWIKQLALVVGVDVQAVTTGVSAFFAGLALGGWLLGRLADRLSRPLLLYAALESGAMVLAVAGT
IALAHAAAPFAWLQDRTGPLAWVLPFALVGLPAVLMGGTLPVLMRALGPRATRLGRAGARLYAANTGGAIAGTLAAAFIL
IPLLGVQGSAFAAAGLNALAALSALLISHFTSDRDPAVIPPLETPPLETPSPAGTTSDHATPGARLVVALYALAGGIALG
YEVVWSQLIVQFISTRSFAFAIVLATYLLGLTLGSALSSRRVDRARDPWGVFALLIVAAGLVALLQVAALGGWLLQWQSL
AREATFSATGSLLAAMCAGFAVAAACIVFVPTLLLGAAFPFALRVSVDARHTGRDVGAVVALNTAGGIAGTLLAGFLLVP
ALGLVHALAVLAVLAGAVGVVAVWRGHGVRRGTRWSVPVLAMATLCAVLLTPSDRFATLLAAARGGTLLSYEESAGGTVA
VVTQGAGDKQFRRLYIQGVSNSGDAMTSLRYMRLQALLPLLVHRDTPRSALVIGLGTGITGGALLTWPGLDKRVVAELLP
AVVHAAPQFKGNYGINADPRVDIRLRDGRRELLRSSERYDLITLEPPPPSAAGVVNLYSSDFYRLAASRLSTNGVVAQWL
PLPTQNEDDTRSLIQSFIQVFPYAALWTTELHEMMLIGSMQPIELDVPRIESRFAQPQVAAALREVGVASPAALLATWIT
DRAGLAYYTADAPPVTDDRPRIEYAAWVRRDGFPDTLTHLLALRGEPPLLHADRAFRAALDAERGALQSFYAAGLDAYRG
ERDTWSRDIGDALQAQPDNPYFRWFVGNEP

Sequences:

>Translated_830_residues
MLLLFASGAASLIYQVLWIKQLALVVGVDVQAVTTGVSAFFAGLALGGWLLGRLADRLSRPLLLYAALESGAMVLAVAGT
IALAHAAAPFAWLQDRTGPLAWVLPFALVGLPAVLMGGTLPVLMRALGPRATRLGRAGARLYAANTGGAIAGTLAAAFIL
IPLLGVQGSAFAAAGLNALAALSALLISHFTSDRDPAVIPPLETPPLETPSPAGTTSDHATPGARLVVALYALAGGIALG
YEVVWSQLIVQFISTRSFAFAIVLATYLLGLTLGSALSSRRVDRARDPWGVFALLIVAAGLVALLQVAALGGWLLQWQSL
AREATFSATGSLLAAMCAGFAVAAACIVFVPTLLLGAAFPFALRVSVDARHTGRDVGAVVALNTAGGIAGTLLAGFLLVP
ALGLVHALAVLAVLAGAVGVVAVWRGHGVRRGTRWSVPVLAMATLCAVLLTPSDRFATLLAAARGGTLLSYEESAGGTVA
VVTQGAGDKQFRRLYIQGVSNSGDAMTSLRYMRLQALLPLLVHRDTPRSALVIGLGTGITGGALLTWPGLDKRVVAELLP
AVVHAAPQFKGNYGINADPRVDIRLRDGRRELLRSSERYDLITLEPPPPSAAGVVNLYSSDFYRLAASRLSTNGVVAQWL
PLPTQNEDDTRSLIQSFIQVFPYAALWTTELHEMMLIGSMQPIELDVPRIESRFAQPQVAAALREVGVASPAALLATWIT
DRAGLAYYTADAPPVTDDRPRIEYAAWVRRDGFPDTLTHLLALRGEPPLLHADRAFRAALDAERGALQSFYAAGLDAYRG
ERDTWSRDIGDALQAQPDNPYFRWFVGNEP
>Mature_830_residues
MLLLFASGAASLIYQVLWIKQLALVVGVDVQAVTTGVSAFFAGLALGGWLLGRLADRLSRPLLLYAALESGAMVLAVAGT
IALAHAAAPFAWLQDRTGPLAWVLPFALVGLPAVLMGGTLPVLMRALGPRATRLGRAGARLYAANTGGAIAGTLAAAFIL
IPLLGVQGSAFAAAGLNALAALSALLISHFTSDRDPAVIPPLETPPLETPSPAGTTSDHATPGARLVVALYALAGGIALG
YEVVWSQLIVQFISTRSFAFAIVLATYLLGLTLGSALSSRRVDRARDPWGVFALLIVAAGLVALLQVAALGGWLLQWQSL
AREATFSATGSLLAAMCAGFAVAAACIVFVPTLLLGAAFPFALRVSVDARHTGRDVGAVVALNTAGGIAGTLLAGFLLVP
ALGLVHALAVLAVLAGAVGVVAVWRGHGVRRGTRWSVPVLAMATLCAVLLTPSDRFATLLAAARGGTLLSYEESAGGTVA
VVTQGAGDKQFRRLYIQGVSNSGDAMTSLRYMRLQALLPLLVHRDTPRSALVIGLGTGITGGALLTWPGLDKRVVAELLP
AVVHAAPQFKGNYGINADPRVDIRLRDGRRELLRSSERYDLITLEPPPPSAAGVVNLYSSDFYRLAASRLSTNGVVAQWL
PLPTQNEDDTRSLIQSFIQVFPYAALWTTELHEMMLIGSMQPIELDVPRIESRFAQPQVAAALREVGVASPAALLATWIT
DRAGLAYYTADAPPVTDDRPRIEYAAWVRRDGFPDTLTHLLALRGEPPLLHADRAFRAALDAERGALQSFYAAGLDAYRG
ERDTWSRDIGDALQAQPDNPYFRWFVGNEP

Specific function: Catalyzes the production of spermidine from putrescine and decarboxylated S-adenosylmethionine (dcSAM), which serves as an aminopropyl donor [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spermidine/spermine synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001045 [H]

Pfam domain/function: PF01564 Spermine_synth [H]

EC number: =2.5.1.16 [H]

Molecular weight: Translated: 87432; Mature: 87432

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLLFASGAASLIYQVLWIKQLALVVGVDVQAVTTGVSAFFAGLALGGWLLGRLADRLSR
CEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PLLLYAALESGAMVLAVAGTIALAHAAAPFAWLQDRTGPLAWVLPFALVGLPAVLMGGTL
CEEEEEECCCCCEEEEHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCH
PVLMRALGPRATRLGRAGARLYAANTGGAIAGTLAAAFILIPLLGVQGSAFAAAGLNALA
HHHHHHHCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ALSALLISHFTSDRDPAVIPPLETPPLETPSPAGTTSDHATPGARLVVALYALAGGIALG
HHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
YEVVWSQLIVQFISTRSFAFAIVLATYLLGLTLGSALSSRRVDRARDPWGVFALLIVAAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LVALLQVAALGGWLLQWQSLAREATFSATGSLLAAMCAGFAVAAACIVFVPTLLLGAAFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FALRVSVDARHTGRDVGAVVALNTAGGIAGTLLAGFLLVPALGLVHALAVLAVLAGAVGV
EEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAVWRGHGVRRGTRWSVPVLAMATLCAVLLTPSDRFATLLAAARGGTLLSYEESAGGTVA
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCEEE
VVTQGAGDKQFRRLYIQGVSNSGDAMTSLRYMRLQALLPLLVHRDTPRSALVIGLGTGIT
EEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
GGALLTWPGLDKRVVAELLPAVVHAAPQFKGNYGINADPRVDIRLRDGRRELLRSSERYD
CCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCCCE
LITLEPPPPSAAGVVNLYSSDFYRLAASRLSTNGVVAQWLPLPTQNEDDTRSLIQSFIQV
EEEECCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHH
FPYAALWTTELHEMMLIGSMQPIELDVPRIESRFAQPQVAAALREVGVASPAALLATWIT
HCCHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHH
DRAGLAYYTADAPPVTDDRPRIEYAAWVRRDGFPDTLTHLLALRGEPPLLHADRAFRAAL
CCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEECCHHHHHHH
DAERGALQSFYAAGLDAYRGERDTWSRDIGDALQAQPDNPYFRWFVGNEP
HHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCC
>Mature Secondary Structure
MLLLFASGAASLIYQVLWIKQLALVVGVDVQAVTTGVSAFFAGLALGGWLLGRLADRLSR
CEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PLLLYAALESGAMVLAVAGTIALAHAAAPFAWLQDRTGPLAWVLPFALVGLPAVLMGGTL
CEEEEEECCCCCEEEEHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCH
PVLMRALGPRATRLGRAGARLYAANTGGAIAGTLAAAFILIPLLGVQGSAFAAAGLNALA
HHHHHHHCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ALSALLISHFTSDRDPAVIPPLETPPLETPSPAGTTSDHATPGARLVVALYALAGGIALG
HHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
YEVVWSQLIVQFISTRSFAFAIVLATYLLGLTLGSALSSRRVDRARDPWGVFALLIVAAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LVALLQVAALGGWLLQWQSLAREATFSATGSLLAAMCAGFAVAAACIVFVPTLLLGAAFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FALRVSVDARHTGRDVGAVVALNTAGGIAGTLLAGFLLVPALGLVHALAVLAVLAGAVGV
EEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAVWRGHGVRRGTRWSVPVLAMATLCAVLLTPSDRFATLLAAARGGTLLSYEESAGGTVA
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCEEE
VVTQGAGDKQFRRLYIQGVSNSGDAMTSLRYMRLQALLPLLVHRDTPRSALVIGLGTGIT
EEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
GGALLTWPGLDKRVVAELLPAVVHAAPQFKGNYGINADPRVDIRLRDGRRELLRSSERYD
CCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCCCCE
LITLEPPPPSAAGVVNLYSSDFYRLAASRLSTNGVVAQWLPLPTQNEDDTRSLIQSFIQV
EEEECCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHH
FPYAALWTTELHEMMLIGSMQPIELDVPRIESRFAQPQVAAALREVGVASPAALLATWIT
HCCHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHH
DRAGLAYYTADAPPVTDDRPRIEYAAWVRRDGFPDTLTHLLALRGEPPLLHADRAFRAAL
CCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEECCHHHHHHH
DAERGALQSFYAAGLDAYRGERDTWSRDIGDALQAQPDNPYFRWFVGNEP
HHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12235376 [H]