| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is ssuC [H]
Identifier: 91783656
GI number: 91783656
Start: 2534673
End: 2535524
Strand: Direct
Name: ssuC [H]
Synonym: Bxe_A2159
Alternate gene names: 91783656
Gene position: 2534673-2535524 (Clockwise)
Preceding gene: 91783655
Following gene: 91783657
Centisome position: 51.77
GC content: 67.49
Gene sequence:
>852_bases ATGAGCGAAACCGCAATCCCGCTCGAACGCGAGCGGCTCGCGCCCACCAAAGCGCCGCACGCGTCGCCGTTGCGCGATCC GCGACTGCGCGCGCTCGCCTGGCGACTCGCGCCGTGGGTATTGCCGGCCCTGCTGCTCGCGCTGTGGGCGGTGGGTTGCG AACGCGGCTGGATCGCGCCGCAAATCCTGCCGCCGCCCGAGCGCGTGTTCGACACACTCGTGGAGCTCGCAAAGAGCGGC GATCTCGCGCGCAATACGCTGATCAGCCTGCAGCGCGTGCTGCTGGGTTTCGGCGCGGGCACACTGCTCGGCTTCGCGCT CGGCGCGGCGCTGGGTCTGTCGCGCACATTAGAGGCCTATGTGCTGCCGAGCTTCAATGCGCTGGTGCAGATTCCGGTGC TCGGCTGGCTGCCGTTTCTGCTGTTGCTCGTAGGCGTGGGCGAGCCGCTCAAATACATCCTGATCGCGCATGCGGCGCTC GTGCCGGTCACGCTGAGCACGCTGCAGGGGTTCCAGCAGACACCCGCCACGCTGGACGAAGTCGCGCGGGTGTTCGAATA CAGCGGCTGGCAACGGATTGTCTATCTGATTCTGCCCGCTGCCGTGCCGACGCTCGCCACGGGTGTGCGGCTCGCCTTTA CCAAGGCCTGGCTCGCGCTGGTGGTGGTCGAACTGGTGGCGTCTTCCGAAGGGCTCGGCTATCTGATCGTCTACGGCCGG CAGCTCTTTCAACTCGACCTGGTGATGGCGTCGGTGGTCGTGGTCGGCGCGATCGGCTATGCGGTGAACCGGGCGCTGGA CGCACTCGAAGCGCGCTTGCGGCGCGGACAGCCGTCGGCATTTCGCGAGTGA
Upstream 100 bases:
>100_bases GCGCTGCGCGCACAAAAACTCGACCACTACTGGACGCGTTACGACGCCGCGGGCAAACCGCTCAGCTAACGCCAGCCAAC CACTCACCGGAGCGATCACG
Downstream 100 bases:
>100_bases CGGCAAGCGCACGCCCGCACGCTCGCACGCATCAAGACTGACCAGGCGCACCGATACGCAAAAACGCGCACAAACACGCA CAAACACGCAGCACCGGCAC
Product: sulfate ester ABC transporter inner membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MSETAIPLERERLAPTKAPHASPLRDPRLRALAWRLAPWVLPALLLALWAVGCERGWIAPQILPPPERVFDTLVELAKSG DLARNTLISLQRVLLGFGAGTLLGFALGAALGLSRTLEAYVLPSFNALVQIPVLGWLPFLLLLVGVGEPLKYILIAHAAL VPVTLSTLQGFQQTPATLDEVARVFEYSGWQRIVYLILPAAVPTLATGVRLAFTKAWLALVVVELVASSEGLGYLIVYGR QLFQLDLVMASVVVVGAIGYAVNRALDALEARLRRGQPSAFRE
Sequences:
>Translated_283_residues MSETAIPLERERLAPTKAPHASPLRDPRLRALAWRLAPWVLPALLLALWAVGCERGWIAPQILPPPERVFDTLVELAKSG DLARNTLISLQRVLLGFGAGTLLGFALGAALGLSRTLEAYVLPSFNALVQIPVLGWLPFLLLLVGVGEPLKYILIAHAAL VPVTLSTLQGFQQTPATLDEVARVFEYSGWQRIVYLILPAAVPTLATGVRLAFTKAWLALVVVELVASSEGLGYLIVYGR QLFQLDLVMASVVVVGAIGYAVNRALDALEARLRRGQPSAFRE >Mature_282_residues SETAIPLERERLAPTKAPHASPLRDPRLRALAWRLAPWVLPALLLALWAVGCERGWIAPQILPPPERVFDTLVELAKSGD LARNTLISLQRVLLGFGAGTLLGFALGAALGLSRTLEAYVLPSFNALVQIPVLGWLPFLLLLVGVGEPLKYILIAHAALV PVTLSTLQGFQQTPATLDEVARVFEYSGWQRIVYLILPAAVPTLATGVRLAFTKAWLALVVVELVASSEGLGYLIVYGRQ LFQLDLVMASVVVVGAIGYAVNRALDALEARLRRGQPSAFRE
Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87081802, Length=245, Percent_Identity=34.2857142857143, Blast_Score=130, Evalue=7e-32, Organism=Escherichia coli, GI1786564, Length=236, Percent_Identity=31.7796610169492, Blast_Score=105, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30666; Mature: 30535
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETAIPLERERLAPTKAPHASPLRDPRLRALAWRLAPWVLPALLLALWAVGCERGWIAP CCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QILPPPERVFDTLVELAKSGDLARNTLISLQRVLLGFGAGTLLGFALGAALGLSRTLEAY CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VLPSFNALVQIPVLGWLPFLLLLVGVGEPLKYILIAHAALVPVTLSTLQGFQQTPATLDE HCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH VARVFEYSGWQRIVYLILPAAVPTLATGVRLAFTKAWLALVVVELVASSEGLGYLIVYGR HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHH QLFQLDLVMASVVVVGAIGYAVNRALDALEARLRRGQPSAFRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SETAIPLERERLAPTKAPHASPLRDPRLRALAWRLAPWVLPALLLALWAVGCERGWIAP CCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QILPPPERVFDTLVELAKSGDLARNTLISLQRVLLGFGAGTLLGFALGAALGLSRTLEAY CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VLPSFNALVQIPVLGWLPFLLLLVGVGEPLKYILIAHAALVPVTLSTLQGFQQTPATLDE HCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH VARVFEYSGWQRIVYLILPAAVPTLATGVRLAFTKAWLALVVVELVASSEGLGYLIVYGR HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHH QLFQLDLVMASVVVVGAIGYAVNRALDALEARLRRGQPSAFRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8011666; 9782504; 9384377 [H]