| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is ssuC [H]
Identifier: 91783657
GI number: 91783657
Start: 2535684
End: 2536562
Strand: Direct
Name: ssuC [H]
Synonym: Bxe_A2158
Alternate gene names: 91783657
Gene position: 2535684-2536562 (Clockwise)
Preceding gene: 91783656
Following gene: 91783658
Centisome position: 51.79
GC content: 68.83
Gene sequence:
>879_bases ATGACTCTCGCCCGCTTCAAGCGTTTCAACCCGTCGCCGAAGGCCGCCGACGCATCCTGCGATTGCGCCGCGCCCGCCGC CTTCCGGCGCGCGGCGCAGCCGCGCCGCCCGCTGCTGGCACGCTTCGACTGGCGCGGCACTGTCCTGCCCCTCGTCGCGA TCGCGATCTGGTGGGCGGTCTCGGAAGCGCACGTGATCAAAAGCGGCCTGCTGGTCAGCCCCGCGCAGGTCCTCGCCACC GCGTGGCAGCAGATCGTCAGCGGCGCGCTGCTGAAGGCGCTTTCGGCGTCGCTCGCGCGCGAAGCCAGCGGCTTTGTGAT CGGCACGCTCGGCGGCCTGCTGCTCGGCAGCGTGCTCGGCTTCTCCCGGCTCGCGACACGCATGATCGGGCCGAGCTTCG ACACCTTCAAACAGATCTCGCTGTTCGCGTGGATTCCGTTGATTTCCGTGTGGTTCGGTCTGGGCGACGCGGCGAAAGTC GTGTTCCTGTCACTCGCCGCGCTGCTGCCCGTCACCGCGCACACCTGCGACGGCATCCATGCGGTGCCGCGCGCCTATAT CGAGGTCGCGCGCGCTTTCCGCTACTCGCGGTGGCAGTTGATCCGCGCGGTGATCCTGCCGGCCGCGCTGCCGTCGATCT TCACGGGCATTTACCTCGCGCTGATCTATTCGTGGCTCGCCACGCTCGGCGCCGAATATCTGCTGGTGGCGGGCAGCGGC ATCGGCAATACGCTGATCGACGGCAGCGAGCAGTTCCGCATGGATCTGGTGCTGTTCGGCGTGATCGTGGTCGGCGTGAC GGGCTGGGCGTTGAACGCGCTGGCGCGTGCCGTGGAGCGGGCGATCTTTGCGCGCCGGCTCCAGTCCTCCGCCCGCTGA
Upstream 100 bases:
>100_bases AAAAACGCGCACAAACACGCACAAACACGCAGCACCGGCACCCACAAACACGCACCACCGGCAGCCGCGCGCACGTGGCG CCGCCCGTGAGGAAACCACG
Downstream 100 bases:
>100_bases ACCCGCCTCCGAACTCTCACCACCCGGATCGCTCATGACGTCTTCCACGCTCTCCGACAGCATCGACATTCTTCACGTCA GCAAACGCTATGCGCAGCAA
Product: sulfate ester ABC transporter inner membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MTLARFKRFNPSPKAADASCDCAAPAAFRRAAQPRRPLLARFDWRGTVLPLVAIAIWWAVSEAHVIKSGLLVSPAQVLAT AWQQIVSGALLKALSASLAREASGFVIGTLGGLLLGSVLGFSRLATRMIGPSFDTFKQISLFAWIPLISVWFGLGDAAKV VFLSLAALLPVTAHTCDGIHAVPRAYIEVARAFRYSRWQLIRAVILPAALPSIFTGIYLALIYSWLATLGAEYLLVAGSG IGNTLIDGSEQFRMDLVLFGVIVVGVTGWALNALARAVERAIFARRLQSSAR
Sequences:
>Translated_292_residues MTLARFKRFNPSPKAADASCDCAAPAAFRRAAQPRRPLLARFDWRGTVLPLVAIAIWWAVSEAHVIKSGLLVSPAQVLAT AWQQIVSGALLKALSASLAREASGFVIGTLGGLLLGSVLGFSRLATRMIGPSFDTFKQISLFAWIPLISVWFGLGDAAKV VFLSLAALLPVTAHTCDGIHAVPRAYIEVARAFRYSRWQLIRAVILPAALPSIFTGIYLALIYSWLATLGAEYLLVAGSG IGNTLIDGSEQFRMDLVLFGVIVVGVTGWALNALARAVERAIFARRLQSSAR >Mature_291_residues TLARFKRFNPSPKAADASCDCAAPAAFRRAAQPRRPLLARFDWRGTVLPLVAIAIWWAVSEAHVIKSGLLVSPAQVLATA WQQIVSGALLKALSASLAREASGFVIGTLGGLLLGSVLGFSRLATRMIGPSFDTFKQISLFAWIPLISVWFGLGDAAKVV FLSLAALLPVTAHTCDGIHAVPRAYIEVARAFRYSRWQLIRAVILPAALPSIFTGIYLALIYSWLATLGAEYLLVAGSGI GNTLIDGSEQFRMDLVLFGVIVVGVTGWALNALARAVERAIFARRLQSSAR
Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87081802, Length=232, Percent_Identity=34.051724137931, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1786564, Length=234, Percent_Identity=30.3418803418803, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1789033, Length=169, Percent_Identity=30.7692307692308, Blast_Score=66, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31375; Mature: 31244
Theoretical pI: Translated: 11.21; Mature: 11.21
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLARFKRFNPSPKAADASCDCAAPAAFRRAAQPRRPLLARFDWRGTVLPLVAIAIWWAV CCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHH SEAHVIKSGLLVSPAQVLATAWQQIVSGALLKALSASLAREASGFVIGTLGGLLLGSVLG HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FSRLATRMIGPSFDTFKQISLFAWIPLISVWFGLGDAAKVVFLSLAALLPVTAHTCDGIH HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHH AVPRAYIEVARAFRYSRWQLIRAVILPAALPSIFTGIYLALIYSWLATLGAEYLLVAGSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC IGNTLIDGSEQFRMDLVLFGVIVVGVTGWALNALARAVERAIFARRLQSSAR CCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TLARFKRFNPSPKAADASCDCAAPAAFRRAAQPRRPLLARFDWRGTVLPLVAIAIWWAV CCHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHH SEAHVIKSGLLVSPAQVLATAWQQIVSGALLKALSASLAREASGFVIGTLGGLLLGSVLG HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FSRLATRMIGPSFDTFKQISLFAWIPLISVWFGLGDAAKVVFLSLAALLPVTAHTCDGIH HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHH AVPRAYIEVARAFRYSRWQLIRAVILPAALPSIFTGIYLALIYSWLATLGAEYLLVAGSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC IGNTLIDGSEQFRMDLVLFGVIVVGVTGWALNALARAVERAIFARRLQSSAR CCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8011666; 9782504; 9384377 [H]