| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is pld1 [H]
Identifier: 91783625
GI number: 91783625
Start: 2498688
End: 2499704
Strand: Direct
Name: pld1 [H]
Synonym: Bxe_A2190
Alternate gene names: 91783625
Gene position: 2498688-2499704 (Clockwise)
Preceding gene: 91783624
Following gene: 91783627
Centisome position: 51.04
GC content: 62.93
Gene sequence:
>1017_bases ATGGATCCGGTAGCAAAGCGGAAATGGCCACGTTCAGGGCTTGAAACAACCGTGATGGGCTTCGGCGCGGCGCCGATCGG CAACATCTTCAGGCCGGTCAGCGAGGAGGATTCGGCAGCGCTCATCAAGGCAGCGTGGGACGCGGGCGTGCGCTATTTCG ACACCGCGCCGATGTATGGCCACGGCTTGAGCGAGGTGCGCTGCGGGCAGGGACTGCGCTGGTATCCGCGCGACCAGTAT GTGCTGTCGACAAAGGTCGGACGGCTCCTGAAACCACGCAGGCGCGCCGAGATCGACTTCGCGCCGTGGGTCGACGGACT GCCGTTCGAGCCTGTTTTCGATTACAGCTACGACGGCACGATGCGCTCGATCGAAGACAGCCTGCAGCGACTGGCGCTGG AGCACATCGATATCGCGCTGATCCATGACATCGACGTCTTTACTCACGGTGAGCGTCAGCCTGAGATGTTCGAGGCCGCG ATGGCGGGCGCGTCGAAAGCCCTGCTTAAACTGCGTGACGAAGGGGTGGTGAAAGCGGTGGGGCTGGGTGTCAACGAGTG GCAGGTCGCGCACGAGGCGATTCGGCGGCAGGATTTCGACTGCCTGCTGCTGGCGGGTCGCTACACCCTGCTCGAACAGG ATGCGCTGGACGGGTTTCTGCCGCTTTGCGAGAAGAAACAGGTGTCGGTGATTCTCGGCGGCGGCTACAACAGCGGCATT CTCGCAACGGGCGCGGTGCCCGGTGCGAAATATAACTACGCGCCCGCGCCGGAAGCCATTCTGGAACGCGTGCGCAAGAT GGAGCAGGTATGCCGCGAGTTCTCGGTGCCGCTGAAGGCAGCGTCGCTGCAATTCGTGCTCGGTCATCCGGCCATTCCGA CCAACATTCCGGGCGTGCGCACGGTTGCTCAACTGGAAGACAATCTTCAAACCTTCCGGGCTGAAATTCCGGCGGAGTTC TGGGCGGAATTGAAGCGCCGCGAGTTGATCCGCGACGACGCGCCGACGCCGCGGTAG
Upstream 100 bases:
>100_bases AGAGAGGGCGTGCGAAAGCTTGCCGCCGCTGCGAAGGTCAAATGAGAGCAGTGTATTGGCTCAGTATCAAACGCTGCTTT ACTGTTGAAAGGGGACAACG
Downstream 100 bases:
>100_bases CAGTCCCGAAGCACCCTGGCTGCGATACCGCAGCGTTAGCCGCTCAACCTGGCGCCGGCTCAGATGAAGCCGCTCTGCGG CCTGCCACGGCATCAGCAGG
Product: putative aldo/keto oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MDPVAKRKWPRSGLETTVMGFGAAPIGNIFRPVSEEDSAALIKAAWDAGVRYFDTAPMYGHGLSEVRCGQGLRWYPRDQY VLSTKVGRLLKPRRRAEIDFAPWVDGLPFEPVFDYSYDGTMRSIEDSLQRLALEHIDIALIHDIDVFTHGERQPEMFEAA MAGASKALLKLRDEGVVKAVGLGVNEWQVAHEAIRRQDFDCLLLAGRYTLLEQDALDGFLPLCEKKQVSVILGGGYNSGI LATGAVPGAKYNYAPAPEAILERVRKMEQVCREFSVPLKAASLQFVLGHPAIPTNIPGVRTVAQLEDNLQTFRAEIPAEF WAELKRRELIRDDAPTPR
Sequences:
>Translated_338_residues MDPVAKRKWPRSGLETTVMGFGAAPIGNIFRPVSEEDSAALIKAAWDAGVRYFDTAPMYGHGLSEVRCGQGLRWYPRDQY VLSTKVGRLLKPRRRAEIDFAPWVDGLPFEPVFDYSYDGTMRSIEDSLQRLALEHIDIALIHDIDVFTHGERQPEMFEAA MAGASKALLKLRDEGVVKAVGLGVNEWQVAHEAIRRQDFDCLLLAGRYTLLEQDALDGFLPLCEKKQVSVILGGGYNSGI LATGAVPGAKYNYAPAPEAILERVRKMEQVCREFSVPLKAASLQFVLGHPAIPTNIPGVRTVAQLEDNLQTFRAEIPAEF WAELKRRELIRDDAPTPR >Mature_338_residues MDPVAKRKWPRSGLETTVMGFGAAPIGNIFRPVSEEDSAALIKAAWDAGVRYFDTAPMYGHGLSEVRCGQGLRWYPRDQY VLSTKVGRLLKPRRRAEIDFAPWVDGLPFEPVFDYSYDGTMRSIEDSLQRLALEHIDIALIHDIDVFTHGERQPEMFEAA MAGASKALLKLRDEGVVKAVGLGVNEWQVAHEAIRRQDFDCLLLAGRYTLLEQDALDGFLPLCEKKQVSVILGGGYNSGI LATGAVPGAKYNYAPAPEAILERVRKMEQVCREFSVPLKAASLQFVLGHPAIPTNIPGVRTVAQLEDNLQTFRAEIPAEF WAELKRRELIRDDAPTPR
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase family [H]
Homologues:
Organism=Escherichia coli, GI1788070, Length=321, Percent_Identity=25.8566978193146, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI87081735, Length=342, Percent_Identity=25.7309941520468, Blast_Score=75, Evalue=6e-15, Organism=Caenorhabditis elegans, GI212645785, Length=310, Percent_Identity=27.4193548387097, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24646155, Length=306, Percent_Identity=27.4509803921569, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24646159, Length=312, Percent_Identity=23.3974358974359, Blast_Score=82, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: =1.1.1.107 [H]
Molecular weight: Translated: 37663; Mature: 37663
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPVAKRKWPRSGLETTVMGFGAAPIGNIFRPVSEEDSAALIKAAWDAGVRYFDTAPMYG CCCCCCCCCCCCCCCHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCEEEECCCCCC HGLSEVRCGQGLRWYPRDQYVLSTKVGRLLKPRRRAEIDFAPWVDGLPFEPVFDYSYDGT CCCCHHHHCCCCCCCCCCCEEHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCH MRSIEDSLQRLALEHIDIALIHDIDVFTHGERQPEMFEAAMAGASKALLKLRDEGVVKAV HHHHHHHHHHHHHHHCCEEEEEEEHHEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE GLGVNEWQVAHEAIRRQDFDCLLLAGRYTLLEQDALDGFLPLCEKKQVSVILGGGYNSGI CCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCE LATGAVPGAKYNYAPAPEAILERVRKMEQVCREFSVPLKAASLQFVLGHPAIPTNIPGVR EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCEEEEECCCCCCCCCCCHH TVAQLEDNLQTFRAEIPAEFWAELKRRELIRDDAPTPR HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDPVAKRKWPRSGLETTVMGFGAAPIGNIFRPVSEEDSAALIKAAWDAGVRYFDTAPMYG CCCCCCCCCCCCCCCHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCEEEECCCCCC HGLSEVRCGQGLRWYPRDQYVLSTKVGRLLKPRRRAEIDFAPWVDGLPFEPVFDYSYDGT CCCCHHHHCCCCCCCCCCCEEHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCH MRSIEDSLQRLALEHIDIALIHDIDVFTHGERQPEMFEAAMAGASKALLKLRDEGVVKAV HHHHHHHHHHHHHHHCCEEEEEEEHHEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE GLGVNEWQVAHEAIRRQDFDCLLLAGRYTLLEQDALDGFLPLCEKKQVSVILGGGYNSGI CCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCE LATGAVPGAKYNYAPAPEAILERVRKMEQVCREFSVPLKAASLQFVLGHPAIPTNIPGVR EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCEEEEECCCCCCCCCCCHH TVAQLEDNLQTFRAEIPAEFWAELKRRELIRDDAPTPR HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA