| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91783624
Identifier: 91783624
GI number: 91783624
Start: 2497385
End: 2498632
Strand: Direct
Name: 91783624
Synonym: Bxe_A2191
Alternate gene names: NA
Gene position: 2497385-2498632 (Clockwise)
Preceding gene: 91783623
Following gene: 91783625
Centisome position: 51.01
GC content: 59.38
Gene sequence:
>1248_bases ATGAAACGATCACTGACGTCGGTTGCGACGGCTGTCACGCTGCTCATGGCTGGAACGCAGGCGGCATTTGCCGCCGAACA GCTCTCGGTGCTGCACTGGTGGACCTCCGGCGGCGAATCGAAAGCGATCCGCGTGCTCAAGGACGATATGAGCAAACAGG GCTACGAGTGGAAAGACTTTGCGATTGCGGGGGGCGCGGGCGCGGCGGCCATGACCGCGCTGAAGACGCAGGTCATCTCG GGCAACGCGCCTTCGGCGGCGCAGATCAAGGGGCCACTGATCCAGGATTGGGCGGAGCAGGGGTCGCTGGTCACGATCGA TCAGGCCGCGACCGATTGGAAAGCGCATACGCCCGCGCAAATAGACAGTGCCATGAAGGCAGGCGGTCACTATGTGGCTG CACCGTTCTCGGTGCATCGAATCAACTGGTTGTGGATCAACAAGGCGGACCTGGACAAAGTCGGCGGTACACCGCCCACC ACATGGCCGGAGTTCTTCGCGCTCGCCGACAAGTTTCGCGCAGCCGGCATCACGCCTGTCGCGCATGGAGGTCAGCCCTG GCAGGATATGACAATCTGGGAGACCGTGGTGCTGTCCCAGGGCGCGGACTTTTACCGGAAAGCCCTCGTCGATCTCGATC AGAAAACGCTGACTTCGCCACAAATGGTTCAGGTGTTCGAGACCGTCCAGAAGATCCGCACTTACTTCGATAAGGGCTAT CACGGCCGCGACTGGAATCTCGCGACGGCAATGGTGATTTCAGGCTCGGGCGGCATGCAGTTCATGGGCGACTGGGCAAA AGGCGAGTTCGCCAACGCAAGCAAAAAGGCGGATGTCGACTATATCTGCGCGGCCGCGCCCGGCACGTCGAATGCCTATA CGTACACGGCGGATGCATTCGTGTTCTTTCAGCAGAACGGCAAAAAGGAGGCGACGCCGGGGCAGCTCGCGCTTGCCAGA ACGATCATGTCGGTCGATTTCCAGCAGCAGTTCAGTCTCTACAAGGGTTCCATTCCAGTTCGGCTCGATGTGCCAATGGA CAAATTCGATAGCTGTGCCAAAAAATCGCGTACGGATGAGCTTGCCACGATCAAATCGGGTGGCTTTCTGCCGTCGTTGG CGTTTGGTGAGCTTCAGTCCTCGGTGACGGCCGGTGCGATAACCGACGTCGTCACCAATTTCATGAACTCGAATGAGGAT GCGAGAGAGGGCGTGCGAAAGCTTGCCGCCGCTGCGAAGGTCAAATGA
Upstream 100 bases:
>100_bases CGCAACTCGGGTTCGATCTGTAGCTGACATGGGCACGCACGCGCAGTCATTCTGATTGCGCATGCGTCGTCCAACCATAA CGAAAAATTCGGAGACTGCA
Downstream 100 bases:
>100_bases GAGCAGTGTATTGGCTCAGTATCAAACGCTGCTTTACTGTTGAAAGGGGACAACGATGGATCCGGTAGCAAAGCGGAAAT GGCCACGTTCAGGGCTTGAA
Product: ABC sugar transporter, periplasmic ligand binding protein
Products: NA
Alternate protein names: Immunogenic 39 kDa protein; P39 [H]
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MKRSLTSVATAVTLLMAGTQAAFAAEQLSVLHWWTSGGESKAIRVLKDDMSKQGYEWKDFAIAGGAGAAAMTALKTQVIS GNAPSAAQIKGPLIQDWAEQGSLVTIDQAATDWKAHTPAQIDSAMKAGGHYVAAPFSVHRINWLWINKADLDKVGGTPPT TWPEFFALADKFRAAGITPVAHGGQPWQDMTIWETVVLSQGADFYRKALVDLDQKTLTSPQMVQVFETVQKIRTYFDKGY HGRDWNLATAMVISGSGGMQFMGDWAKGEFANASKKADVDYICAAAPGTSNAYTYTADAFVFFQQNGKKEATPGQLALAR TIMSVDFQQQFSLYKGSIPVRLDVPMDKFDSCAKKSRTDELATIKSGGFLPSLAFGELQSSVTAGAITDVVTNFMNSNED AREGVRKLAAAAKVK
Sequences:
>Translated_415_residues MKRSLTSVATAVTLLMAGTQAAFAAEQLSVLHWWTSGGESKAIRVLKDDMSKQGYEWKDFAIAGGAGAAAMTALKTQVIS GNAPSAAQIKGPLIQDWAEQGSLVTIDQAATDWKAHTPAQIDSAMKAGGHYVAAPFSVHRINWLWINKADLDKVGGTPPT TWPEFFALADKFRAAGITPVAHGGQPWQDMTIWETVVLSQGADFYRKALVDLDQKTLTSPQMVQVFETVQKIRTYFDKGY HGRDWNLATAMVISGSGGMQFMGDWAKGEFANASKKADVDYICAAAPGTSNAYTYTADAFVFFQQNGKKEATPGQLALAR TIMSVDFQQQFSLYKGSIPVRLDVPMDKFDSCAKKSRTDELATIKSGGFLPSLAFGELQSSVTAGAITDVVTNFMNSNED AREGVRKLAAAAKVK >Mature_415_residues MKRSLTSVATAVTLLMAGTQAAFAAEQLSVLHWWTSGGESKAIRVLKDDMSKQGYEWKDFAIAGGAGAAAMTALKTQVIS GNAPSAAQIKGPLIQDWAEQGSLVTIDQAATDWKAHTPAQIDSAMKAGGHYVAAPFSVHRINWLWINKADLDKVGGTPPT TWPEFFALADKFRAAGITPVAHGGQPWQDMTIWETVVLSQGADFYRKALVDLDQKTLTSPQMVQVFETVQKIRTYFDKGY HGRDWNLATAMVISGSGGMQFMGDWAKGEFANASKKADVDYICAAAPGTSNAYTYTADAFVFFQQNGKKEATPGQLALAR TIMSVDFQQQFSLYKGSIPVRLDVPMDKFDSCAKKSRTDELATIKSGGFLPSLAFGELQSSVTAGAITDVVTNFMNSNED AREGVRKLAAAAKVK
Specific function: Part of a binding-protein-dependent transport system for a sugar (Potential) [H]
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 44795; Mature: 44795
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSLTSVATAVTLLMAGTQAAFAAEQLSVLHWWTSGGESKAIRVLKDDMSKQGYEWKDF CCCHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCCCEE AIAGGAGAAAMTALKTQVISGNAPSAAQIKGPLIQDWAEQGSLVTIDQAATDWKAHTPAQ EEECCCCHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHCCCEEEEECCCCCCCCCCCHH IDSAMKAGGHYVAAPFSVHRINWLWINKADLDKVGGTPPTTWPEFFALADKFRAAGITPV HHHHHHCCCCEEECCEEEEEEEEEEEECCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCC AHGGQPWQDMTIWETVVLSQGADFYRKALVDLDQKTLTSPQMVQVFETVQKIRTYFDKGY CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHCCC HGRDWNLATAMVISGSGGMQFMGDWAKGEFANASKKADVDYICAAAPGTSNAYTYTADAF CCCCCCEEEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEE VFFQQNGKKEATPGQLALARTIMSVDFQQQFSLYKGSIPVRLDVPMDKFDSCAKKSRTDE EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCH LATIKSGGFLPSLAFGELQSSVTAGAITDVVTNFMNSNEDAREGVRKLAAAAKVK HEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKRSLTSVATAVTLLMAGTQAAFAAEQLSVLHWWTSGGESKAIRVLKDDMSKQGYEWKDF CCCHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCCCEE AIAGGAGAAAMTALKTQVISGNAPSAAQIKGPLIQDWAEQGSLVTIDQAATDWKAHTPAQ EEECCCCHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHCCCEEEEECCCCCCCCCCCHH IDSAMKAGGHYVAAPFSVHRINWLWINKADLDKVGGTPPTTWPEFFALADKFRAAGITPV HHHHHHCCCCEEECCEEEEEEEEEEEECCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCC AHGGQPWQDMTIWETVVLSQGADFYRKALVDLDQKTLTSPQMVQVFETVQKIRTYFDKGY CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHCCC HGRDWNLATAMVISGSGGMQFMGDWAKGEFANASKKADVDYICAAAPGTSNAYTYTADAF CCCCCCEEEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEE VFFQQNGKKEATPGQLALARTIMSVDFQQQFSLYKGSIPVRLDVPMDKFDSCAKKSRTDE EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCH LATIKSGGFLPSLAFGELQSSVTAGAITDVVTNFMNSNEDAREGVRKLAAAAKVK HEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9009303; 10235622 [H]