| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91783576
Identifier: 91783576
GI number: 91783576
Start: 2440742
End: 2442235
Strand: Direct
Name: 91783576
Synonym: Bxe_A2239
Alternate gene names: NA
Gene position: 2440742-2442235 (Clockwise)
Preceding gene: 91783575
Following gene: 91783577
Centisome position: 49.85
GC content: 63.72
Gene sequence:
>1494_bases ATGTCGACGATCGCGCGAAGCGCCGATAGCTCGAACAGCGGCTCGAACAGCGCGGGACGGGCGCCGTCCCGTACCCGCAA GGAATGGCTGCCGGAGGCTTTGCTGTGGCTCGTCACGGCGCTGCTGATCGGCGCGCATCAGGGCACGGTGCTCACGCTCG CGTTTCCGATGCTCGCGATCCTGACGGGCCTGTGGCTCTACTTCAGGAGCCCGGCGCGCTACATCGGCTTCATGTGGTGG CTGTGGTTCCTGAGCCCGGAAGTGCGGCGTCTGGCCGACTGGTCCAAAGGCTCGTTCACGCCGACCAGCCTGATCCAGGT TGCGCCGCTTGCGGTGACGATGATCAGCGCGCTGTCGCTGCTGCGCTACTACAAGCTGCTCGCGCAGCGGCGCGGCCTGC CGGTGCTGCTGATCCTGCTCGGGCTGATCTATGCGTTCCTGGTGGGCGTGATGTCGAGCGGACCGCTCGCGGCCACCTAC GATCTCGCGAACTGGCTCTATCCGATCCTGATCGGCTTTCACATCATGGCGCACACGCGCCAGTATCCGAAGTACCGCGA CACCATCGTCAATACGTTCATCTGGGGCATGCTGGTGATGGGCGGCTACGGCCTCGTGCAGTTTTTCATCATGCCGCAGT GGGACGCGCTGTGGATGCTCGGCTCGCAGATGAACTCGCAAGGCGACCCCGTGCCGATGGGCGTGCGCGTGTTCAGCACG ATGAATTCGTCTGGACCGTTCGCGTTCGCGATGATGGGCGCGATGGTGTTCGTGATGGCGGCCACGCACCGGGTACGCTG GATCGCCGCGGCGCTCGGCTTTTTCGCGTTCGCGCTGAGCCTCGTGCGCTCGACCTGGGGCGGCTGGGTCATCGCGCTGC TGATCCAGCTCGTCAAATCGAACAACAAGGTGCGGGTGCGCATCATCGCCAGCGCGGTGCTGCTGGCGGGGCTCTGCGTG CCGCTGCTGGCGGTCGGCCCGGTTGCCGAGCGGATGCAGGCGCGCCTCACCACCATCGTCAACCTGAACGACGACCAGAG CTATGCGGCGCGTAACGAATTCTATGCGACCTTCGCCAAAACCGCCTTTACCGATGTGTCCGGCGAGGGCATGGGCGCGA CCGGCACCTCCACCAAGCTCTCGAACGACGGCGGCCAGCTCGGCCAGTACGGCAACTTCGACAGCGGCGTGATGAACATT CCGTTCGTGCTCGGCTGGCCCGGCACGCTGCTCTACATGTCCGGCATTGTCTGGATCCTGACACGCGCCGTGCTCGCGTC GTTCAAGCTGCGCAACGACAAATTCGTCTCCGCCTGCCTGAGCCTGAGTCTCGCGACCTTCGCGATGCTGGTGTTCACCA ATTCGCTGGTGGGCACGGGCGGCTTGCTGCTTTTCATGAGTGTTTTTTCGATCCTTTCCGCGGTGCATTACGAAAAACTG AACCGCGCAGGTACGTCATATCGCACGCTATTACTTCACGGAGGCACTGATTGA
Upstream 100 bases:
>100_bases GCGCCCGGCGGCCAGCATGGCTGCGGCTGCGGCGACGACGGCGGCGGCAGTGGCCGAGCCCGAGCGGTCGGCGCGCCAGT CGCGTGGAGGTCTCTGAACG
Downstream 100 bases:
>100_bases GAGTTGCCATTGTCACGCACGTTGTGCGCCATAACGACGGCCAGGGGCGCGTCAACCACGAGATCGCGCGCGCGGCGCTC GACGAGAACATCGGCGTCAC
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 497; Mature: 496
Protein sequence:
>497_residues MSTIARSADSSNSGSNSAGRAPSRTRKEWLPEALLWLVTALLIGAHQGTVLTLAFPMLAILTGLWLYFRSPARYIGFMWW LWFLSPEVRRLADWSKGSFTPTSLIQVAPLAVTMISALSLLRYYKLLAQRRGLPVLLILLGLIYAFLVGVMSSGPLAATY DLANWLYPILIGFHIMAHTRQYPKYRDTIVNTFIWGMLVMGGYGLVQFFIMPQWDALWMLGSQMNSQGDPVPMGVRVFST MNSSGPFAFAMMGAMVFVMAATHRVRWIAAALGFFAFALSLVRSTWGGWVIALLIQLVKSNNKVRVRIIASAVLLAGLCV PLLAVGPVAERMQARLTTIVNLNDDQSYAARNEFYATFAKTAFTDVSGEGMGATGTSTKLSNDGGQLGQYGNFDSGVMNI PFVLGWPGTLLYMSGIVWILTRAVLASFKLRNDKFVSACLSLSLATFAMLVFTNSLVGTGGLLLFMSVFSILSAVHYEKL NRAGTSYRTLLLHGGTD
Sequences:
>Translated_497_residues MSTIARSADSSNSGSNSAGRAPSRTRKEWLPEALLWLVTALLIGAHQGTVLTLAFPMLAILTGLWLYFRSPARYIGFMWW LWFLSPEVRRLADWSKGSFTPTSLIQVAPLAVTMISALSLLRYYKLLAQRRGLPVLLILLGLIYAFLVGVMSSGPLAATY DLANWLYPILIGFHIMAHTRQYPKYRDTIVNTFIWGMLVMGGYGLVQFFIMPQWDALWMLGSQMNSQGDPVPMGVRVFST MNSSGPFAFAMMGAMVFVMAATHRVRWIAAALGFFAFALSLVRSTWGGWVIALLIQLVKSNNKVRVRIIASAVLLAGLCV PLLAVGPVAERMQARLTTIVNLNDDQSYAARNEFYATFAKTAFTDVSGEGMGATGTSTKLSNDGGQLGQYGNFDSGVMNI PFVLGWPGTLLYMSGIVWILTRAVLASFKLRNDKFVSACLSLSLATFAMLVFTNSLVGTGGLLLFMSVFSILSAVHYEKL NRAGTSYRTLLLHGGTD >Mature_496_residues STIARSADSSNSGSNSAGRAPSRTRKEWLPEALLWLVTALLIGAHQGTVLTLAFPMLAILTGLWLYFRSPARYIGFMWWL WFLSPEVRRLADWSKGSFTPTSLIQVAPLAVTMISALSLLRYYKLLAQRRGLPVLLILLGLIYAFLVGVMSSGPLAATYD LANWLYPILIGFHIMAHTRQYPKYRDTIVNTFIWGMLVMGGYGLVQFFIMPQWDALWMLGSQMNSQGDPVPMGVRVFSTM NSSGPFAFAMMGAMVFVMAATHRVRWIAAALGFFAFALSLVRSTWGGWVIALLIQLVKSNNKVRVRIIASAVLLAGLCVP LLAVGPVAERMQARLTTIVNLNDDQSYAARNEFYATFAKTAFTDVSGEGMGATGTSTKLSNDGGQLGQYGNFDSGVMNIP FVLGWPGTLLYMSGIVWILTRAVLASFKLRNDKFVSACLSLSLATFAMLVFTNSLVGTGGLLLFMSVFSILSAVHYEKLN RAGTSYRTLLLHGGTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54457; Mature: 54326
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTIARSADSSNSGSNSAGRAPSRTRKEWLPEALLWLVTALLIGAHQGTVLTLAFPMLAI CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LTGLWLYFRSPARYIGFMWWLWFLSPEVRRLADWSKGSFTPTSLIQVAPLAVTMISALSL HHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH LRYYKLLAQRRGLPVLLILLGLIYAFLVGVMSSGPLAATYDLANWLYPILIGFHIMAHTR HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHH QYPKYRDTIVNTFIWGMLVMGGYGLVQFFIMPQWDALWMLGSQMNSQGDPVPMGVRVFST CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHH MNSSGPFAFAMMGAMVFVMAATHRVRWIAAALGFFAFALSLVRSTWGGWVIALLIQLVKS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NNKVRVRIIASAVLLAGLCVPLLAVGPVAERMQARLTTIVNLNDDQSYAARNEFYATFAK CCCEEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHH TAFTDVSGEGMGATGTSTKLSNDGGQLGQYGNFDSGVMNIPFVLGWPGTLLYMSGIVWIL HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEECCCHHHHHHHHHHHHH TRAVLASFKLRNDKFVSACLSLSLATFAMLVFTNSLVGTGGLLLFMSVFSILSAVHYEKL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH NRAGTSYRTLLLHGGTD HHCCCCEEEEEEECCCC >Mature Secondary Structure STIARSADSSNSGSNSAGRAPSRTRKEWLPEALLWLVTALLIGAHQGTVLTLAFPMLAI CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LTGLWLYFRSPARYIGFMWWLWFLSPEVRRLADWSKGSFTPTSLIQVAPLAVTMISALSL HHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH LRYYKLLAQRRGLPVLLILLGLIYAFLVGVMSSGPLAATYDLANWLYPILIGFHIMAHTR HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHH QYPKYRDTIVNTFIWGMLVMGGYGLVQFFIMPQWDALWMLGSQMNSQGDPVPMGVRVFST CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHH MNSSGPFAFAMMGAMVFVMAATHRVRWIAAALGFFAFALSLVRSTWGGWVIALLIQLVKS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NNKVRVRIIASAVLLAGLCVPLLAVGPVAERMQARLTTIVNLNDDQSYAARNEFYATFAK CCCEEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHH TAFTDVSGEGMGATGTSTKLSNDGGQLGQYGNFDSGVMNIPFVLGWPGTLLYMSGIVWIL HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEECCCHHHHHHHHHHHHH TRAVLASFKLRNDKFVSACLSLSLATFAMLVFTNSLVGTGGLLLFMSVFSILSAVHYEKL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH NRAGTSYRTLLLHGGTD HHCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA