| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is rfaG [C]
Identifier: 91783577
GI number: 91783577
Start: 2442232
End: 2443461
Strand: Direct
Name: rfaG [C]
Synonym: Bxe_A2238
Alternate gene names: 91783577
Gene position: 2442232-2443461 (Clockwise)
Preceding gene: 91783576
Following gene: 91783578
Centisome position: 49.88
GC content: 66.42
Gene sequence:
>1230_bases TTGAGAGTTGCCATTGTCACGCACGTTGTGCGCCATAACGACGGCCAGGGGCGCGTCAACCACGAGATCGCGCGCGCGGC GCTCGACGAGAACATCGGCGTCACGCTGGTCGCCTCGCATGTCGCGCCCGATCTGCTCGCGCATCCGAACGTCCGCTGGG TGCCGGTGAAAATCGGCCGCTGGTGGCCCACCAATCTGCTGCGCCAGCAGGTGTTCGCGTTCAGAAGCGCGATGTGGCTG CGCGCGCATCGCCGCGAATACGACGTGCTGCATGTGAACGGCTTCATCACGTGGATGCGCGCCGACGTCAACACCTCGCA CTTCGTGCATAGCGGCTGGTTCGGCAGCAAGTACTACCCGTTCGGGCTCACCAAGGGCGTGTGGTCCGCGTATCAGTCGG TCTATACGCGCTGCAATGCGCTGCTCGAACGCTGGGCCTACCGGCGCTCGAAGGTGATCACAGCGGTGTCGCAAAAGGTC GCCGACGAAATCCGCGCGATCGGCCTCACGCCGGATAACCGTGTGGATGTGATCTACAACGGCGTCGATACGCAGGGCTT CGCGGCGGCCACCGGCGACCGCGAGAAATTCGGCCTGCCGAAAGACGCGTTCCTGCTGCTGTTCGTCGGCGACCTGCGCA CGCCGCGCAAGAACCTCGGCACCGTGCTCGCCGCGCTCAGGTTTCTGCCGGAGCACGTGCAGATCGCGGTGGCCGGTTTT CTGCCGGGCAGCCCGTACCCGGAACAGGCGAAGGCGCTCGGCATCGCGCACCGCGTGCATTTTCTCGGGCTCGTGAAAGA GATGCCGGTGCTGATGCATTCGGTCGACGCCTTCGTCTTCCCGTCGCGCTACGAAGCGATGAGCCTGTCGCTGCTCGAAG CGATGGCGGCCGGTTTGCCGGTGGTCACCGCGCGCACCGCGGGCGGCGCTGAAATCATCACGCCGGAATGCGGCATCGTG CTCGACGATCCGGACGATCCCAAGGCGCTCGCCGAGGCGATCGCGCGTCTCGCCGGAAATCACGACGAGCGCCGCGCGAT GGGTGTCGCCGCCAACGAACTCGCGACCGGCTTCGGCTGGGCGCGCATGGCCGCGCAATACATCGCGCTGTATCGCCAGT TGGCGGGGCAGCAGAAGGATCGACGGCGCAGCGAGGCGGAGGCAGCGGCGGTCGCCAGAAACGACGCGCTGACGCTGAAC ACGCTGGCCGGCCAGAAGAGCGCGGAATGA
Upstream 100 bases:
>100_bases TTTTCATGAGTGTTTTTTCGATCCTTTCCGCGGTGCATTACGAAAAACTGAACCGCGCAGGTACGTCATATCGCACGCTA TTACTTCACGGAGGCACTGA
Downstream 100 bases:
>100_bases CGCGGCGGGTTTCAACCAGCCGGCTGACGTATGCGGCGCTTCATCATCACAACTCTCAGAACGCACAGGGGTCACAATCA TGACGACAAGCTCCATCAAA
Product: putative glycosyl transferase, group 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MRVAIVTHVVRHNDGQGRVNHEIARAALDENIGVTLVASHVAPDLLAHPNVRWVPVKIGRWWPTNLLRQQVFAFRSAMWL RAHRREYDVLHVNGFITWMRADVNTSHFVHSGWFGSKYYPFGLTKGVWSAYQSVYTRCNALLERWAYRRSKVITAVSQKV ADEIRAIGLTPDNRVDVIYNGVDTQGFAAATGDREKFGLPKDAFLLLFVGDLRTPRKNLGTVLAALRFLPEHVQIAVAGF LPGSPYPEQAKALGIAHRVHFLGLVKEMPVLMHSVDAFVFPSRYEAMSLSLLEAMAAGLPVVTARTAGGAEIITPECGIV LDDPDDPKALAEAIARLAGNHDERRAMGVAANELATGFGWARMAAQYIALYRQLAGQQKDRRRSEAEAAAVARNDALTLN TLAGQKSAE
Sequences:
>Translated_409_residues MRVAIVTHVVRHNDGQGRVNHEIARAALDENIGVTLVASHVAPDLLAHPNVRWVPVKIGRWWPTNLLRQQVFAFRSAMWL RAHRREYDVLHVNGFITWMRADVNTSHFVHSGWFGSKYYPFGLTKGVWSAYQSVYTRCNALLERWAYRRSKVITAVSQKV ADEIRAIGLTPDNRVDVIYNGVDTQGFAAATGDREKFGLPKDAFLLLFVGDLRTPRKNLGTVLAALRFLPEHVQIAVAGF LPGSPYPEQAKALGIAHRVHFLGLVKEMPVLMHSVDAFVFPSRYEAMSLSLLEAMAAGLPVVTARTAGGAEIITPECGIV LDDPDDPKALAEAIARLAGNHDERRAMGVAANELATGFGWARMAAQYIALYRQLAGQQKDRRRSEAEAAAVARNDALTLN TLAGQKSAE >Mature_409_residues MRVAIVTHVVRHNDGQGRVNHEIARAALDENIGVTLVASHVAPDLLAHPNVRWVPVKIGRWWPTNLLRQQVFAFRSAMWL RAHRREYDVLHVNGFITWMRADVNTSHFVHSGWFGSKYYPFGLTKGVWSAYQSVYTRCNALLERWAYRRSKVITAVSQKV ADEIRAIGLTPDNRVDVIYNGVDTQGFAAATGDREKFGLPKDAFLLLFVGDLRTPRKNLGTVLAALRFLPEHVQIAVAGF LPGSPYPEQAKALGIAHRVHFLGLVKEMPVLMHSVDAFVFPSRYEAMSLSLLEAMAAGLPVVTARTAGGAEIITPECGIV LDDPDDPKALAEAIARLAGNHDERRAMGVAANELATGFGWARMAAQYIALYRQLAGQQKDRRRSEAEAAAVARNDALTLN TLAGQKSAE
Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790061, Length=272, Percent_Identity=27.5735294117647, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 45147; Mature: 45147
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVAIVTHVVRHNDGQGRVNHEIARAALDENIGVTLVASHVAPDLLAHPNVRWVPVKIGR CEEEEEEHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHCHHHHCCCCCEEEEEEECC WWPTNLLRQQVFAFRSAMWLRAHRREYDVLHVNGFITWMRADVNTSHFVHSGWFGSKYYP CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEEECCCCCCEEECCCCCCEECC FGLTKGVWSAYQSVYTRCNALLERWAYRRSKVITAVSQKVADEIRAIGLTPDNRVDVIYN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEE GVDTQGFAAATGDREKFGLPKDAFLLLFVGDLRTPRKNLGTVLAALRFLPEHVQIAVAGF CCCCCCCEECCCCHHHCCCCCHHEEEEEECCCCCCHHHHHHHHHHHHHCCHHHEEEEEEC LPGSPYPEQAKALGIAHRVHFLGLVKEMPVLMHSVDAFVFPSRYEAMSLSLLEAMAAGLP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC VVTARTAGGAEIITPECGIVLDDPDDPKALAEAIARLAGNHDERRAMGVAANELATGFGW EEEEECCCCCEEECCCCCEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHH ARMAAQYIALYRQLAGQQKDRRRSEAEAAAVARNDALTLNTLAGQKSAE HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC >Mature Secondary Structure MRVAIVTHVVRHNDGQGRVNHEIARAALDENIGVTLVASHVAPDLLAHPNVRWVPVKIGR CEEEEEEHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHCHHHHCCCCCEEEEEEECC WWPTNLLRQQVFAFRSAMWLRAHRREYDVLHVNGFITWMRADVNTSHFVHSGWFGSKYYP CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEEECCCCCCEEECCCCCCEECC FGLTKGVWSAYQSVYTRCNALLERWAYRRSKVITAVSQKVADEIRAIGLTPDNRVDVIYN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEE GVDTQGFAAATGDREKFGLPKDAFLLLFVGDLRTPRKNLGTVLAALRFLPEHVQIAVAGF CCCCCCCEECCCCHHHCCCCCHHEEEEEECCCCCCHHHHHHHHHHHHHCCHHHEEEEEEC LPGSPYPEQAKALGIAHRVHFLGLVKEMPVLMHSVDAFVFPSRYEAMSLSLLEAMAAGLP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC VVTARTAGGAEIITPECGIVLDDPDDPKALAEAIARLAGNHDERRAMGVAANELATGFGW EEEEECCCCCEEECCCCCEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHH ARMAAQYIALYRQLAGQQKDRRRSEAEAAAVARNDALTLNTLAGQKSAE HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Glycosyltransferases; Hexosyltransferases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]