| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is arcB [H]
Identifier: 91783499
GI number: 91783499
Start: 2348869
End: 2350842
Strand: Direct
Name: arcB [H]
Synonym: Bxe_A2317
Alternate gene names: 91783499
Gene position: 2348869-2350842 (Clockwise)
Preceding gene: 91783498
Following gene: 91783504
Centisome position: 47.98
GC content: 64.89
Gene sequence:
>1974_bases ATGACCGAAGAAGTGTCCACGCAGCATGCCGCATATGTGCTGGTCGTCGATGACGACGAAGGCATCCTGCGGCTCGCGCG CAAGTCGCTGGAACGCGCCGGCTGCCGGGTCGCGATCTGCGCGGGCGTCGACGCGGCCCGTGAGCGTCTCGCGCGCGGCG GCCCCGATTTGCTGGTGCTCGACTATCAGCTCAGCGGGCCCGAGACCGGTCTCGACTTCTTTCGCCATTTGCGCGCTGAA GGCGTGCGGATTCCCGCCATTCTCGTGACCGGTTTCACCGACGAATCGCGTGTCATCGAAGCGCTGCGCGCGGGCGTGTC CGACGTGGTGCCGAAATCGGGCGACTACCTCGATTACCTTCCCGAAGCCGTCGAACGGGTGCTCTCGCAAGTGCGTTTGC AGCGAGCGTCGGACGAGGCCCTGCTGCTGCGCGACCGCGAGCAGCATTACCGCACCTTGTCGGAGGCGTTGCCGCACCTC GTCATGACCTGCAACGCCGCGGGCGACTGCGATTTTCTGTCGAAGCAGTGGTACGACTACACCGGCCTTGCCGAAGGCAG TTCGTATGGTCTCGCCTGGCTCGACGCCGTGCATCCGGACGACCGCGAAGTGATCCGCCGCAGCTGGCTCAAGGCCGTGT CGGGCAATGCCGGCGACTACCGGCACGAGTTGCGGATTCGCCGCCACGACGGCGAATACCGCTGGTTCGACGTCCGCGTG GTGGCGATGCGCGACGCCGAAGGCAACATCAGCAAATGGTTCGGCAGTTGCACCGACATTCATTCGCAACGCGAGGCGAT CGAGGAGCGCGAACGTCTGCTTGCGTCGGAACAGGCCGCGCGCCAGATCGCCGAAGAAGCGAATCGCGCCAAAGACCGCT TTCTGGCCATGCTGTCGCACGAACTGCGTACGCCGCTCACGCCGGTGCTCGCCGGCGCCAGCGTGCTGGAGATGATTCCG GAACTGCCCGACCAGGCGCGCGCGAGCGTGCGCATGATTCGCCGTAACGTCGAACTCGAGGCGCGGCTGATCGACGACCT GCTCGACCTGACGCGGGTGGCGAACGGCAAGCTGCGGCTCTCGCTGGAAACTGTCGACGTGCACGACGTGATGGACAGCG TGCTCGAACTGTTTCGCAGCGAGATTCAGGTCAAGCAGCAGGACGTGCACGTTCATAAGAACGCCCGGCATCATTACGTG CTGGCCGATCGCGCCCGGCTGCAGCAGATGCTGTGGAACCTGATTCGCAATGCCGCGAAGTTCACCCCGGACGGCGGCCA TATCTATGTGCGCACCCGCGACGAACGCATGCACGTGCAGATAGCGGTCGAAGATACGGGCATCGGCATCGAGCCGGACC AGATCGGCAAACTCTTCAACGCGTTCGAGCAGGGCAACCAGAACATGACGCGGCAATTCGGCGGGCTCGGTCTCGGGCTC GCCATCACGAAGGCGTTGACCGACGTGCATGGCGGCACGGTGACTGCGCAAAGCCCCGGCGCGCATTGCGGCGCGACCTT CACGATCACCTTGCCGACGGCCACGGCGCCGGAAGTCACGTCACCTGTCGTAGTGCCGGACCAGGTGCATCCGGCCGGTC TGCTGACCATCCTGCTGATCGAAGATCACGTGGATACCGCTGAAGTCATGGCGCAACTGATTCGCAGCCTCGGCCACGAG GTGACGACCGTGGGCCGGGTGGACGACGCGCTGGCCGCCACCCAATCGGCGGACTTCGATCTGGTGATCAGCGACGTGGG TCTGCCCGACGGCACCGGCCTCGACTTCATCAAGGTGTTCCGCGAGCACTCGGACGCGCCCGCGGTGGCATTGACCGGCT TCGGCACCGACGAAGACGTGCGCCGCTGCCTCAGCGCCGGCTTTACTTCGCATCTGACCAAGCCAGTCAACTTCGGCCAG CTCGAGACAATGATCGAAGGCGCGGTGAACCGCAAGGAGCAGAAGGAGGCTTGA
Upstream 100 bases:
>100_bases ATCGTTTTTCGGGCCCGTGATGGAAGGCCGCATGAAGGTGGCCGAAAGCCGCTCGTGACAAGATGGACCACTTGCCGACC CTAGCCAGAGAAGACTTCGC
Downstream 100 bases:
>100_bases GCGATTGCGCTGCCGGTATCGGCTCACGCTATGAATAAGGCCTGTTGCGAGCGGATCGCAACAGGCCTTTTGCTTTACCG GCGGCTGACGTGCCGGAATG
Product: PAS/PAC sensor hybrid histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 657; Mature: 656
Protein sequence:
>657_residues MTEEVSTQHAAYVLVVDDDEGILRLARKSLERAGCRVAICAGVDAARERLARGGPDLLVLDYQLSGPETGLDFFRHLRAE GVRIPAILVTGFTDESRVIEALRAGVSDVVPKSGDYLDYLPEAVERVLSQVRLQRASDEALLLRDREQHYRTLSEALPHL VMTCNAAGDCDFLSKQWYDYTGLAEGSSYGLAWLDAVHPDDREVIRRSWLKAVSGNAGDYRHELRIRRHDGEYRWFDVRV VAMRDAEGNISKWFGSCTDIHSQREAIEERERLLASEQAARQIAEEANRAKDRFLAMLSHELRTPLTPVLAGASVLEMIP ELPDQARASVRMIRRNVELEARLIDDLLDLTRVANGKLRLSLETVDVHDVMDSVLELFRSEIQVKQQDVHVHKNARHHYV LADRARLQQMLWNLIRNAAKFTPDGGHIYVRTRDERMHVQIAVEDTGIGIEPDQIGKLFNAFEQGNQNMTRQFGGLGLGL AITKALTDVHGGTVTAQSPGAHCGATFTITLPTATAPEVTSPVVVPDQVHPAGLLTILLIEDHVDTAEVMAQLIRSLGHE VTTVGRVDDALAATQSADFDLVISDVGLPDGTGLDFIKVFREHSDAPAVALTGFGTDEDVRRCLSAGFTSHLTKPVNFGQ LETMIEGAVNRKEQKEA
Sequences:
>Translated_657_residues MTEEVSTQHAAYVLVVDDDEGILRLARKSLERAGCRVAICAGVDAARERLARGGPDLLVLDYQLSGPETGLDFFRHLRAE GVRIPAILVTGFTDESRVIEALRAGVSDVVPKSGDYLDYLPEAVERVLSQVRLQRASDEALLLRDREQHYRTLSEALPHL VMTCNAAGDCDFLSKQWYDYTGLAEGSSYGLAWLDAVHPDDREVIRRSWLKAVSGNAGDYRHELRIRRHDGEYRWFDVRV VAMRDAEGNISKWFGSCTDIHSQREAIEERERLLASEQAARQIAEEANRAKDRFLAMLSHELRTPLTPVLAGASVLEMIP ELPDQARASVRMIRRNVELEARLIDDLLDLTRVANGKLRLSLETVDVHDVMDSVLELFRSEIQVKQQDVHVHKNARHHYV LADRARLQQMLWNLIRNAAKFTPDGGHIYVRTRDERMHVQIAVEDTGIGIEPDQIGKLFNAFEQGNQNMTRQFGGLGLGL AITKALTDVHGGTVTAQSPGAHCGATFTITLPTATAPEVTSPVVVPDQVHPAGLLTILLIEDHVDTAEVMAQLIRSLGHE VTTVGRVDDALAATQSADFDLVISDVGLPDGTGLDFIKVFREHSDAPAVALTGFGTDEDVRRCLSAGFTSHLTKPVNFGQ LETMIEGAVNRKEQKEA >Mature_656_residues TEEVSTQHAAYVLVVDDDEGILRLARKSLERAGCRVAICAGVDAARERLARGGPDLLVLDYQLSGPETGLDFFRHLRAEG VRIPAILVTGFTDESRVIEALRAGVSDVVPKSGDYLDYLPEAVERVLSQVRLQRASDEALLLRDREQHYRTLSEALPHLV MTCNAAGDCDFLSKQWYDYTGLAEGSSYGLAWLDAVHPDDREVIRRSWLKAVSGNAGDYRHELRIRRHDGEYRWFDVRVV AMRDAEGNISKWFGSCTDIHSQREAIEERERLLASEQAARQIAEEANRAKDRFLAMLSHELRTPLTPVLAGASVLEMIPE LPDQARASVRMIRRNVELEARLIDDLLDLTRVANGKLRLSLETVDVHDVMDSVLELFRSEIQVKQQDVHVHKNARHHYVL ADRARLQQMLWNLIRNAAKFTPDGGHIYVRTRDERMHVQIAVEDTGIGIEPDQIGKLFNAFEQGNQNMTRQFGGLGLGLA ITKALTDVHGGTVTAQSPGAHCGATFTITLPTATAPEVTSPVVVPDQVHPAGLLTILLIEDHVDTAEVMAQLIRSLGHEV TTVGRVDDALAATQSADFDLVISDVGLPDGTGLDFIKVFREHSDAPAVALTGFGTDEDVRRCLSAGFTSHLTKPVNFGQL ETMIEGAVNRKEQKEA
Specific function: Member of the two-component regulatory system ArcB/ArcA. Sensor-regulator protein for anaerobic repression of the arc modulon. Activates ArcA via a four-step phosphorelay. ArcB can also dephosphorylate ArcA by a reverse phosphorelay involving His- 717 and
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI48994928, Length=543, Percent_Identity=27.0718232044199, Blast_Score=159, Evalue=7e-40, Organism=Escherichia coli, GI87081816, Length=387, Percent_Identity=31.5245478036176, Blast_Score=147, Evalue=2e-36, Organism=Escherichia coli, GI1788713, Length=395, Percent_Identity=26.8354430379747, Blast_Score=127, Evalue=3e-30, Organism=Escherichia coli, GI1786912, Length=254, Percent_Identity=33.8582677165354, Blast_Score=125, Evalue=7e-30, Organism=Escherichia coli, GI1789149, Length=249, Percent_Identity=34.5381526104418, Blast_Score=122, Evalue=5e-29, Organism=Escherichia coli, GI145693157, Length=248, Percent_Identity=32.258064516129, Blast_Score=122, Evalue=1e-28, Organism=Escherichia coli, GI1786600, Length=226, Percent_Identity=32.7433628318584, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI1786783, Length=248, Percent_Identity=28.6290322580645, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1788393, Length=235, Percent_Identity=29.3617021276596, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1790436, Length=239, Percent_Identity=26.3598326359833, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1788279, Length=223, Percent_Identity=30.4932735426009, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1790861, Length=226, Percent_Identity=28.7610619469027, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI1790346, Length=228, Percent_Identity=28.5087719298246, Blast_Score=69, Evalue=8e-13, Organism=Escherichia coli, GI1790551, Length=214, Percent_Identity=28.9719626168224, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1790300, Length=265, Percent_Identity=28.6792452830189, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1788549, Length=243, Percent_Identity=25.9259259259259, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1787894, Length=249, Percent_Identity=27.710843373494, Blast_Score=67, Evalue=5e-12, Organism=Escherichia coli, GI87082128, Length=227, Percent_Identity=25.5506607929515, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1789808, Length=219, Percent_Identity=27.8538812785388, Blast_Score=63, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6322044, Length=82, Percent_Identity=41.4634146341463, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR014409 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF01627 Hpt; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 72793; Mature: 72662
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEEVSTQHAAYVLVVDDDEGILRLARKSLERAGCRVAICAGVDAARERLARGGPDLLVL CCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCEEEE DYQLSGPETGLDFFRHLRAEGVRIPAILVTGFTDESRVIEALRAGVSDVVPKSGDYLDYL EEECCCCCHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHCCHHHCCCCCCCHHHHH PEAVERVLSQVRLQRASDEALLLRDREQHYRTLSEALPHLVMTCNAAGDCDFLSKQWYDY HHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHCCCC TGLAEGSSYGLAWLDAVHPDDREVIRRSWLKAVSGNAGDYRHELRIRRHDGEYRWFDVRV CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHEEEEEECCCEEEEEEEE VAMRDAEGNISKWFGSCTDIHSQREAIEERERLLASEQAARQIAEEANRAKDRFLAMLSH EEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELRTPLTPVLAGASVLEMIPELPDQARASVRMIRRNVELEARLIDDLLDLTRVANGKLRL HHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEE SLETVDVHDVMDSVLELFRSEIQVKQQDVHVHKNARHHYVLADRARLQQMLWNLIRNAAK EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHH FTPDGGHIYVRTRDERMHVQIAVEDTGIGIEPDQIGKLFNAFEQGNQNMTRQFGGLGLGL CCCCCCEEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCHHH AITKALTDVHGGTVTAQSPGAHCGATFTITLPTATAPEVTSPVVVPDQVHPAGLLTILLI HHHHHHHHCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEE EDHVDTAEVMAQLIRSLGHEVTTVGRVDDALAATQSADFDLVISDVGLPDGTGLDFIKVF ECCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHH REHSDAPAVALTGFGTDEDVRRCLSAGFTSHLTKPVNFGQLETMIEGAVNRKEQKEA HHCCCCCEEEEECCCCCHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure TEEVSTQHAAYVLVVDDDEGILRLARKSLERAGCRVAICAGVDAARERLARGGPDLLVL CCCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCEEEE DYQLSGPETGLDFFRHLRAEGVRIPAILVTGFTDESRVIEALRAGVSDVVPKSGDYLDYL EEECCCCCHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHCCHHHCCCCCCCHHHHH PEAVERVLSQVRLQRASDEALLLRDREQHYRTLSEALPHLVMTCNAAGDCDFLSKQWYDY HHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHCCCC TGLAEGSSYGLAWLDAVHPDDREVIRRSWLKAVSGNAGDYRHELRIRRHDGEYRWFDVRV CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHEEEEEECCCEEEEEEEE VAMRDAEGNISKWFGSCTDIHSQREAIEERERLLASEQAARQIAEEANRAKDRFLAMLSH EEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELRTPLTPVLAGASVLEMIPELPDQARASVRMIRRNVELEARLIDDLLDLTRVANGKLRL HHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEE SLETVDVHDVMDSVLELFRSEIQVKQQDVHVHKNARHHYVLADRARLQQMLWNLIRNAAK EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHH FTPDGGHIYVRTRDERMHVQIAVEDTGIGIEPDQIGKLFNAFEQGNQNMTRQFGGLGLGL CCCCCCEEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCHHH AITKALTDVHGGTVTAQSPGAHCGATFTITLPTATAPEVTSPVVVPDQVHPAGLLTILLI HHHHHHHHCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEE EDHVDTAEVMAQLIRSLGHEVTTVGRVDDALAATQSADFDLVISDVGLPDGTGLDFIKVF ECCCCHHHHHHHHHHHCCCCEEECCCHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHH REHSDAPAVALTGFGTDEDVRRCLSAGFTSHLTKPVNFGQLETMIEGAVNRKEQKEA HHCCCCCEEEEECCCCCHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]