| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is kdgK [H]
Identifier: 91783480
GI number: 91783480
Start: 2325785
End: 2326735
Strand: Direct
Name: kdgK [H]
Synonym: Bxe_A2336
Alternate gene names: 91783480
Gene position: 2325785-2326735 (Clockwise)
Preceding gene: 91783479
Following gene: 91783481
Centisome position: 47.51
GC content: 66.25
Gene sequence:
>951_bases ATGGCGGCGAGCATGAGCGCAACGCCGGAGGTCCAGCGTCCGGACATCCTCGCGCTCGGCGAGGCGATGATCGAATTCAA CCAGTCGGTCAAAGACGAGCCGAACTATCTGCAAGGCTTCGGCGGCGATACGTCGAATTTTTGCATCGCGGCCGCCCGCC AGGGCGCGCGCACGGGTTTTGTGTCCGCGGTCGGCGCGGATCATTTCGGGCGTTTGCTGGTCGATCTGTGGGAACGTGAA CAGGTGGATACGTCGCTCGTACGTGTCGATCCGCATGCGTCCACCGGCGTTTATTTCGTGTCCCACGGTCCCGAAGGCCA CGCGTTCGACTATCTGCGCGCCGGCTCGGCCGCAAGCCGCTATGCGCCGCAAGATCTGCCGCTCGAAGCGATCGCCGCTG CCAGGGTGATTCACCTGTCCGGCATCAGCCTCGCGATCAGCCTGAGCGCCTGCGACGCGGCGCTGGCGGCGATCGCTCAT GCTCGCGCCAACGGCGTGCGCGTGAGCTTCGACACCAATCTCCGGCTGAAGCTGTGGCCGCTCGCCCGGGCGCGCGCGGT CATGCTCGAAGCGATTCGCCAGACGGACATCTGCCTGCCGAGCTGGGACGATGTCACCGAACTCACGGGTCTGACCGGCC GTGACGAGATCGTCGATTTCCTGCTGTCGCACGGTCCGGGCGTGGTCGCGCTCAAGCTCGGCAAACAGGGCTCGTATATC GCCACGCCTAACGAGCGGCGCGTCGTGCCGGGCCAGCTCGTCGACGCGGTCGATGCAACCGGCGCGGGCGACTGCTTCGG CGGCGCGTTTATCGCGCGTATCGTCGCGGGTGACGATCCATTTGCGGCGGCACGTTATGCGAACGTCGCGGCGGCGCTGT CCACGCAGGGTTATGGCGCGGTGGCGCCGATTCCTTCGCGCGAGACGGTCGAACAACTTCTGGCGGACTGA
Upstream 100 bases:
>100_bases GCCGGCTGTAAAGGCGTCCAAACGTTACAAGGTCGGCGATTTCGTGTCGGTGAAGATCACCGGCGCCGACGGTCACGACC TGTGGGGCGAGGTATAGGCA
Downstream 100 bases:
>100_bases ACACGCGCGGTGATGCGCGGCCCGCCGGGGAAAAATCATCTTGAGAGACGGAACAGGGAGGCAGCGATGCAACGGGACGT AGTGGTGGTAAGCGGCGTGC
Product: ribokinase family sugar kinase
Products: NA
Alternate protein names: 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase [H]
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MAASMSATPEVQRPDILALGEAMIEFNQSVKDEPNYLQGFGGDTSNFCIAAARQGARTGFVSAVGADHFGRLLVDLWERE QVDTSLVRVDPHASTGVYFVSHGPEGHAFDYLRAGSAASRYAPQDLPLEAIAAARVIHLSGISLAISLSACDAALAAIAH ARANGVRVSFDTNLRLKLWPLARARAVMLEAIRQTDICLPSWDDVTELTGLTGRDEIVDFLLSHGPGVVALKLGKQGSYI ATPNERRVVPGQLVDAVDATGAGDCFGGAFIARIVAGDDPFAAARYANVAAALSTQGYGAVAPIPSRETVEQLLAD
Sequences:
>Translated_316_residues MAASMSATPEVQRPDILALGEAMIEFNQSVKDEPNYLQGFGGDTSNFCIAAARQGARTGFVSAVGADHFGRLLVDLWERE QVDTSLVRVDPHASTGVYFVSHGPEGHAFDYLRAGSAASRYAPQDLPLEAIAAARVIHLSGISLAISLSACDAALAAIAH ARANGVRVSFDTNLRLKLWPLARARAVMLEAIRQTDICLPSWDDVTELTGLTGRDEIVDFLLSHGPGVVALKLGKQGSYI ATPNERRVVPGQLVDAVDATGAGDCFGGAFIARIVAGDDPFAAARYANVAAALSTQGYGAVAPIPSRETVEQLLAD >Mature_315_residues AASMSATPEVQRPDILALGEAMIEFNQSVKDEPNYLQGFGGDTSNFCIAAARQGARTGFVSAVGADHFGRLLVDLWEREQ VDTSLVRVDPHASTGVYFVSHGPEGHAFDYLRAGSAASRYAPQDLPLEAIAAARVIHLSGISLAISLSACDAALAAIAHA RANGVRVSFDTNLRLKLWPLARARAVMLEAIRQTDICLPSWDDVTELTGLTGRDEIVDFLLSHGPGVVALKLGKQGSYIA TPNERRVVPGQLVDAVDATGAGDCFGGAFIARIVAGDDPFAAARYANVAAALSTQGYGAVAPIPSRETVEQLLAD
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Homo sapiens, GI11545855, Length=299, Percent_Identity=28.0936454849498, Blast_Score=77, Evalue=1e-14, Organism=Escherichia coli, GI87082281, Length=304, Percent_Identity=30.2631578947368, Blast_Score=114, Evalue=6e-27, Organism=Escherichia coli, GI87081971, Length=317, Percent_Identity=27.7602523659306, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1790193, Length=285, Percent_Identity=27.719298245614, Blast_Score=71, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.45 [H]
Molecular weight: Translated: 33300; Mature: 33169
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAASMSATPEVQRPDILALGEAMIEFNQSVKDEPNYLQGFGGDTSNFCIAAARQGARTGF CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEEEHHCCCCCCH VSAVGADHFGRLLVDLWEREQVDTSLVRVDPHASTGVYFVSHGPEGHAFDYLRAGSAASR HHHHCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCCHHHHHCCCCHHH YAPQDLPLEAIAAARVIHLSGISLAISLSACDAALAAIAHARANGVRVSFDTNLRLKLWP CCCCCCCHHHHHHHHHHEECCCEEEEEHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEC LARARAVMLEAIRQTDICLPSWDDVTELTGLTGRDEIVDFLLSHGPGVVALKLGKQGSYI HHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEE ATPNERRVVPGQLVDAVDATGAGDCFGGAFIARIVAGDDPFAAARYANVAAALSTQGYGA ECCCCCEECCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC VAPIPSRETVEQLLAD CCCCCCHHHHHHHHCC >Mature Secondary Structure AASMSATPEVQRPDILALGEAMIEFNQSVKDEPNYLQGFGGDTSNFCIAAARQGARTGF CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEEEEHHCCCCCCH VSAVGADHFGRLLVDLWEREQVDTSLVRVDPHASTGVYFVSHGPEGHAFDYLRAGSAASR HHHHCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCCHHHHHCCCCHHH YAPQDLPLEAIAAARVIHLSGISLAISLSACDAALAAIAHARANGVRVSFDTNLRLKLWP CCCCCCCHHHHHHHHHHEECCCEEEEEHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEC LARARAVMLEAIRQTDICLPSWDDVTELTGLTGRDEIVDFLLSHGPGVVALKLGKQGSYI HHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEE ATPNERRVVPGQLVDAVDATGAGDCFGGAFIARIVAGDDPFAAARYANVAAALSTQGYGA ECCCCCEECCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC VAPIPSRETVEQLLAD CCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]