| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is phbA [H]
Identifier: 91783474
GI number: 91783474
Start: 2319075
End: 2320256
Strand: Direct
Name: phbA [H]
Synonym: Bxe_A2342
Alternate gene names: 91783474
Gene position: 2319075-2320256 (Clockwise)
Preceding gene: 91783473
Following gene: 91783475
Centisome position: 47.37
GC content: 66.5
Gene sequence:
>1182_bases ATGACTGATGTTGTGATCGTATCGGCCGCCCGTACGGCAGTGGGCAAATTCGGTGGGTCGCTGGCGAAAATCGCCGCGCC CGATCTCGGCGCCGCGGTGATTCGCGCCGTTCTCGAGCGTGCCGGTCTGAAGCCCGAGCAGGTGAGCGAAGTGATCCTGG GCCAGGTGCTGACGGCAGGCTCGGGCCAGAATCCGGCGCGTCAATCGCTGATCAAGGCGGGTCTGCCTTCGGCGGTGCCG GGCATGACGATCAACAAGGTCTGCGGCTCCGGCCTGAAGGCCGTGATGCTCGCGGCCAATGCCATTATCGCGGGCGACGC GGACATCGTGATCGCCGGCGGGCAGGAAAACATGAGCGCCGCGCCGCACGTGCTGCCGGGCTCGCGCGACGGCTTCCGCA TGGGCGACGCGAAGCTGGTCGACTCGATGATCGTCGATGGCCTGTGGGACGTCTACAACCAGTATCACATGGGCGTGACG GCGGAAAACGTCGCGAAGGAATACGGCATCACGCGCGAACAGCAGGACGCGTTCGCGGCGTTGTCGCAGAACAAGGCGGA AGCCGCGCAGAAGTCGGGCCGGTTCGACGACGAAATCGTGCCGATCGAGATTCCGCAACGCAAGGGCGAGCCGCTGCGTT TCGCGACCGACGAATTCGTGCGTCACGGCGTGACGGCCGAGTCGCTCGCGGGCCTGAAGCCGGCCTTCTCGAAGGAAGGC ACGGTGACGGCGGCCAATGCCTCCGGTCTTAACGACGGTGCTGCGGCCGTGCTGGTGATGTCGGCGAAGAAGGCCGAAGC GCTCGGCCTCACGCCGCTCGCGCGCATCAAGGCGTATGCGAACGCCGGCGTGGATCCGAAGGTGATGGGCATGGGCCCGG TGCCGGCTTCGCGCCGTTGCCTCGAACGCGCGGGCTGGACGCCGGCCGACCTCGACCTGATGGAAATCAACGAAGCGTTT GCCGCGCAGGCGCTCGCCGTGCATCAGCAGATGGGCTGGGACACGTCGAAGGTCAACGTGAACGGCGGCGCGATTGCGAT CGGCCATCCGATCGGCGCGTCCGGCTGCCGGATTCTCGTCACGCTGCTGCACGAAATGCAGAAGCGCGATGCGAAGAAGG GTTTGGCCTCGCTGTGTATCGGCGGTGGCATGGGTGTGGCGCTGGCGGTCGAGCGCGCCTGA
Upstream 100 bases:
>100_bases AACGCGTAGCTGACCGGGTCAGGGCGCAAGCAGAAGGAACGAGATTTTTTAACTTGACGGGCTGCGGCGCATTTGGCCGA CTCGCCCGGAGGATATGGAA
Downstream 100 bases:
>100_bases GTATCGTCGCGCGACCGGAGCCTGCTGCGTCGGTCGCGCGACACACAGAGCGTTGCCGCGCGCCGAGGCGTGCGGTCAGC GGTGGCCTCGTCGGCCGGTC
Product: acetyl-CoA acetyltransferase
Products: NA
Alternate protein names: Acetoacetyl-CoA thiolase [H]
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MTDVVIVSAARTAVGKFGGSLAKIAAPDLGAAVIRAVLERAGLKPEQVSEVILGQVLTAGSGQNPARQSLIKAGLPSAVP GMTINKVCGSGLKAVMLAANAIIAGDADIVIAGGQENMSAAPHVLPGSRDGFRMGDAKLVDSMIVDGLWDVYNQYHMGVT AENVAKEYGITREQQDAFAALSQNKAEAAQKSGRFDDEIVPIEIPQRKGEPLRFATDEFVRHGVTAESLAGLKPAFSKEG TVTAANASGLNDGAAAVLVMSAKKAEALGLTPLARIKAYANAGVDPKVMGMGPVPASRRCLERAGWTPADLDLMEINEAF AAQALAVHQQMGWDTSKVNVNGGAIAIGHPIGASGCRILVTLLHEMQKRDAKKGLASLCIGGGMGVALAVERA
Sequences:
>Translated_393_residues MTDVVIVSAARTAVGKFGGSLAKIAAPDLGAAVIRAVLERAGLKPEQVSEVILGQVLTAGSGQNPARQSLIKAGLPSAVP GMTINKVCGSGLKAVMLAANAIIAGDADIVIAGGQENMSAAPHVLPGSRDGFRMGDAKLVDSMIVDGLWDVYNQYHMGVT AENVAKEYGITREQQDAFAALSQNKAEAAQKSGRFDDEIVPIEIPQRKGEPLRFATDEFVRHGVTAESLAGLKPAFSKEG TVTAANASGLNDGAAAVLVMSAKKAEALGLTPLARIKAYANAGVDPKVMGMGPVPASRRCLERAGWTPADLDLMEINEAF AAQALAVHQQMGWDTSKVNVNGGAIAIGHPIGASGCRILVTLLHEMQKRDAKKGLASLCIGGGMGVALAVERA >Mature_392_residues TDVVIVSAARTAVGKFGGSLAKIAAPDLGAAVIRAVLERAGLKPEQVSEVILGQVLTAGSGQNPARQSLIKAGLPSAVPG MTINKVCGSGLKAVMLAANAIIAGDADIVIAGGQENMSAAPHVLPGSRDGFRMGDAKLVDSMIVDGLWDVYNQYHMGVTA ENVAKEYGITREQQDAFAALSQNKAEAAQKSGRFDDEIVPIEIPQRKGEPLRFATDEFVRHGVTAESLAGLKPAFSKEGT VTAANASGLNDGAAAVLVMSAKKAEALGLTPLARIKAYANAGVDPKVMGMGPVPASRRCLERAGWTPADLDLMEINEAFA AQALAVHQQMGWDTSKVNVNGGAIAIGHPIGASGCRILVTLLHEMQKRDAKKGLASLCIGGGMGVALAVERA
Specific function: Unknown
COG id: COG0183
COG function: function code I; Acetyl-CoA acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiolase family [H]
Homologues:
Organism=Homo sapiens, GI148539872, Length=391, Percent_Identity=54.7314578005115, Blast_Score=436, Evalue=1e-122, Organism=Homo sapiens, GI4557237, Length=393, Percent_Identity=44.0203562340967, Blast_Score=321, Evalue=1e-87, Organism=Homo sapiens, GI167614485, Length=390, Percent_Identity=43.8461538461538, Blast_Score=319, Evalue=3e-87, Organism=Homo sapiens, GI4501853, Length=395, Percent_Identity=42.7848101265823, Blast_Score=276, Evalue=3e-74, Organism=Homo sapiens, GI4504327, Length=424, Percent_Identity=31.6037735849057, Blast_Score=189, Evalue=4e-48, Organism=Homo sapiens, GI194353979, Length=392, Percent_Identity=31.6326530612245, Blast_Score=164, Evalue=1e-40, Organism=Escherichia coli, GI87082165, Length=392, Percent_Identity=63.0102040816327, Blast_Score=492, Evalue=1e-140, Organism=Escherichia coli, GI1788554, Length=393, Percent_Identity=60.559796437659, Blast_Score=451, Evalue=1e-128, Organism=Escherichia coli, GI1787663, Length=404, Percent_Identity=46.2871287128713, Blast_Score=324, Evalue=6e-90, Organism=Escherichia coli, GI48994986, Length=399, Percent_Identity=42.6065162907268, Blast_Score=275, Evalue=5e-75, Organism=Escherichia coli, GI1788683, Length=409, Percent_Identity=35.2078239608802, Blast_Score=205, Evalue=4e-54, Organism=Caenorhabditis elegans, GI133906874, Length=390, Percent_Identity=45.6410256410256, Blast_Score=329, Evalue=2e-90, Organism=Caenorhabditis elegans, GI25147385, Length=387, Percent_Identity=42.1188630490956, Blast_Score=300, Evalue=1e-81, Organism=Caenorhabditis elegans, GI17535921, Length=396, Percent_Identity=40.6565656565657, Blast_Score=275, Evalue=4e-74, Organism=Caenorhabditis elegans, GI17551802, Length=428, Percent_Identity=32.7102803738318, Blast_Score=191, Evalue=4e-49, Organism=Caenorhabditis elegans, GI17535917, Length=394, Percent_Identity=32.48730964467, Blast_Score=187, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6325229, Length=397, Percent_Identity=43.0730478589421, Blast_Score=296, Evalue=3e-81, Organism=Saccharomyces cerevisiae, GI6322031, Length=399, Percent_Identity=40.1002506265664, Blast_Score=236, Evalue=3e-63, Organism=Drosophila melanogaster, GI24655093, Length=392, Percent_Identity=58.1632653061224, Blast_Score=456, Evalue=1e-129, Organism=Drosophila melanogaster, GI24640423, Length=393, Percent_Identity=46.0559796437659, Blast_Score=328, Evalue=3e-90, Organism=Drosophila melanogaster, GI17648125, Length=390, Percent_Identity=45.3846153846154, Blast_Score=314, Evalue=7e-86, Organism=Drosophila melanogaster, GI17137578, Length=425, Percent_Identity=30.8235294117647, Blast_Score=177, Evalue=9e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020615 - InterPro: IPR020610 - InterPro: IPR020617 - InterPro: IPR020613 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: =2.3.1.9 [H]
Molecular weight: Translated: 40576; Mature: 40445
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: PS00098 THIOLASE_1 ; PS00737 THIOLASE_2 ; PS00099 THIOLASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDVVIVSAARTAVGKFGGSLAKIAAPDLGAAVIRAVLERAGLKPEQVSEVILGQVLTAG CCCEEEEEHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC SGQNPARQSLIKAGLPSAVPGMTINKVCGSGLKAVMLAANAIIAGDADIVIAGGQENMSA CCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHCEEEECCCCEEEECCCCCCCC APHVLPGSRDGFRMGDAKLVDSMIVDGLWDVYNQYHMGVTAENVAKEYGITREQQDAFAA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHH LSQNKAEAAQKSGRFDDEIVPIEIPQRKGEPLRFATDEFVRHGVTAESLAGLKPAFSKEG HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEHHHHHHHCCCCHHHHHCCCCCCCCCC TVTAANASGLNDGAAAVLVMSAKKAEALGLTPLARIKAYANAGVDPKVMGMGPVPASRRC CEEECCCCCCCCCCEEEEEEECCHHHHCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHH LERAGWTPADLDLMEINEAFAAQALAVHQQMGWDTSKVNVNGGAIAIGHPIGASGCRILV HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCCCHHHHHH TLLHEMQKRDAKKGLASLCIGGGMGVALAVERA HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC >Mature Secondary Structure TDVVIVSAARTAVGKFGGSLAKIAAPDLGAAVIRAVLERAGLKPEQVSEVILGQVLTAG CCEEEEEHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC SGQNPARQSLIKAGLPSAVPGMTINKVCGSGLKAVMLAANAIIAGDADIVIAGGQENMSA CCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHCEEEECCCCEEEECCCCCCCC APHVLPGSRDGFRMGDAKLVDSMIVDGLWDVYNQYHMGVTAENVAKEYGITREQQDAFAA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHH LSQNKAEAAQKSGRFDDEIVPIEIPQRKGEPLRFATDEFVRHGVTAESLAGLKPAFSKEG HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEHHHHHHHCCCCHHHHHCCCCCCCCCC TVTAANASGLNDGAAAVLVMSAKKAEALGLTPLARIKAYANAGVDPKVMGMGPVPASRRC CEEECCCCCCCCCCEEEEEEECCHHHHCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHH LERAGWTPADLDLMEINEAFAAQALAVHQQMGWDTSKVNVNGGAIAIGHPIGASGCRILV HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCCCHHHHHH TLLHEMQKRDAKKGLASLCIGGGMGVALAVERA HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2670935; 2670936 [H]