Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

Click here to switch to the map view.

The map label for this gene is 91783467

Identifier: 91783467

GI number: 91783467

Start: 2310854

End: 2311630

Strand: Direct

Name: 91783467

Synonym: Bxe_A2349

Alternate gene names: NA

Gene position: 2310854-2311630 (Clockwise)

Preceding gene: 91783466

Following gene: 161621317

Centisome position: 47.2

GC content: 61.26

Gene sequence:

>777_bases
ATGACACCGATTCTTGTTTTCGACATCGAGACGATTCCCGATGTCGCCGGCATTCGCCGCCTCGAAGATCTGCCCGCCAC
GCTCAGCGACGCCGAAGTCGCCGAGCATGCGTTCGCCGCGCGCCGCGAAAAGACCGGCGGCGATTTCCTGCCGCATCATC
TGCAACGGATCGCGGCGATTTCCTGTGTGTTCCGCGACAACAACGGCTTCCGGGTCCGCTCGCTCGGTACGCTGGAAGAC
GGTGAGGCGGCGCTGGTGCAGTCGTTTTATCGCGTGATCGAGAAGTACACGCCGCAGCTCGTGTCGTGGAACGGCGGCGG
ATTCGACCTGCCGGTGCTGAACTACCGCGCACTCGTCAACGGCATTCCCGCCTACAAGTTCTGGGACCTCGGCGAGGACG
ACCGCGAGTTCAAGTGGAACAACTACATCAGCCGCTATCACGCGCGTCACACGGATCTGATGGACGTGCTCGCCATGTAT
CAGGCGCGCGCCAACGCGCCGCTCGACGCGCTCGCCAAAATGTGCGGCTTCCCCGGCAAGATGGGCATGGACGGCAGCCA
GGTGTGGCACGCGTACCAGGAAGGGCGCCTCGAAGAGATCCGCAATTACTGCGAGACCGACGTCGTCAATACTTATTTGC
TCTATTGCCGCTTCCAGTTGATTCGCGGCGCGTTTTCGCCCGCTGAGTATGCTGATGAGATCAACCTGGTCAAGAATGCA
CTGGCGCTGGAAACGGCGCCGCAATGGGCCGAGTATCTGGCGGCATTCGATCAGTAA

Upstream 100 bases:

>100_bases
ACGCGCGAGCGTGTGCGCCAGATCCAACAGGAAGCGCTCGTGCGGTTAAAGCGCTTCTTCGCCTCCAACGGTGTTCGGAA
AGACGCCGTTCTATAACCTG

Downstream 100 bases:

>100_bases
GTGGCTTGTAGTCGGGCCGCGGAGGGGCCCGCAGGGCGGCGCGGGTAGCGAGGCCGCCGCGGTCTTTCGCTCCAAAGGCT
CCAAAGGTGCAAGGCGGTGC

Product: putative 3'-5' exonuclease

Products: NA

Alternate protein names: 3-5' Exonuclease PolB-Like Protein; Polysaccharide Biosynthesis Protein; Propable PolB; Polysaccharide Biosynthesis Protein WlaX; Lipoprotein SmpA/OmlA Family; 3&Apos; Large-Conductance Mechanosensitive Channel

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MTPILVFDIETIPDVAGIRRLEDLPATLSDAEVAEHAFAARREKTGGDFLPHHLQRIAAISCVFRDNNGFRVRSLGTLED
GEAALVQSFYRVIEKYTPQLVSWNGGGFDLPVLNYRALVNGIPAYKFWDLGEDDREFKWNNYISRYHARHTDLMDVLAMY
QARANAPLDALAKMCGFPGKMGMDGSQVWHAYQEGRLEEIRNYCETDVVNTYLLYCRFQLIRGAFSPAEYADEINLVKNA
LALETAPQWAEYLAAFDQ

Sequences:

>Translated_258_residues
MTPILVFDIETIPDVAGIRRLEDLPATLSDAEVAEHAFAARREKTGGDFLPHHLQRIAAISCVFRDNNGFRVRSLGTLED
GEAALVQSFYRVIEKYTPQLVSWNGGGFDLPVLNYRALVNGIPAYKFWDLGEDDREFKWNNYISRYHARHTDLMDVLAMY
QARANAPLDALAKMCGFPGKMGMDGSQVWHAYQEGRLEEIRNYCETDVVNTYLLYCRFQLIRGAFSPAEYADEINLVKNA
LALETAPQWAEYLAAFDQ
>Mature_257_residues
TPILVFDIETIPDVAGIRRLEDLPATLSDAEVAEHAFAARREKTGGDFLPHHLQRIAAISCVFRDNNGFRVRSLGTLEDG
EAALVQSFYRVIEKYTPQLVSWNGGGFDLPVLNYRALVNGIPAYKFWDLGEDDREFKWNNYISRYHARHTDLMDVLAMYQ
ARANAPLDALAKMCGFPGKMGMDGSQVWHAYQEGRLEEIRNYCETDVVNTYLLYCRFQLIRGAFSPAEYADEINLVKNAL
ALETAPQWAEYLAAFDQ

Specific function: Unknown

COG id: COG3298

COG function: function code L; Predicted 3'-5' exonuclease related to the exonuclease domain of PolB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29298; Mature: 29167

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPILVFDIETIPDVAGIRRLEDLPATLSDAEVAEHAFAARREKTGGDFLPHHLQRIAAI
CCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
SCVFRDNNGFRVRSLGTLEDGEAALVQSFYRVIEKYTPQLVSWNGGGFDLPVLNYRALVN
HHEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHC
GIPAYKFWDLGEDDREFKWNNYISRYHARHTDLMDVLAMYQARANAPLDALAKMCGFPGK
CCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC
MGMDGSQVWHAYQEGRLEEIRNYCETDVVNTYLLYCRFQLIRGAFSPAEYADEINLVKNA
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LALETAPQWAEYLAAFDQ
HHHHCCHHHHHHHHHHCC
>Mature Secondary Structure 
TPILVFDIETIPDVAGIRRLEDLPATLSDAEVAEHAFAARREKTGGDFLPHHLQRIAAI
CCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
SCVFRDNNGFRVRSLGTLEDGEAALVQSFYRVIEKYTPQLVSWNGGGFDLPVLNYRALVN
HHEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHC
GIPAYKFWDLGEDDREFKWNNYISRYHARHTDLMDVLAMYQARANAPLDALAKMCGFPGK
CCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCC
MGMDGSQVWHAYQEGRLEEIRNYCETDVVNTYLLYCRFQLIRGAFSPAEYADEINLVKNA
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LALETAPQWAEYLAAFDQ
HHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA