Click here to switch to the map view.

The map label for this gene is rraA [C]

Identifier: 91783387

GI number: 91783387

Start: 2233676

End: 2234383

Strand: Direct

Name: rraA [C]

Synonym: Bxe_A2429

Alternate gene names: 91783387

Gene position: 2233676-2234383 (Clockwise)

Preceding gene: 91783386

Following gene: 91783388

Centisome position: 45.62

GC content: 66.1

Gene sequence:

>708_bases
ATGGCCTATCAACAGCTTTATGTGAGTTTCACTCTTCTCTCCGACGACGTGCTCGCGCAATGGCGTCTGATTCCGCCCGC
CGTCGCCTCCGACTGCATGAACCGCACGCAGGTGATGGCGTCGATCATCAAGCCGATCAACGCGGGCGTGCGCTTGTGCG
GCCAGGCGCGCACGGTCGCGACGATGGTCGGCGACTGCGGGCCGATCTGCAACCTGATCGGCAGCGCGCGGCCCGGCGAA
ATTCTCGTGGTCGATGCAGGCGGCGCGGAAGACATCGCCGTGTGGGGCGGCGTGATGACCGAGGAGGCCGTGCATCGCGG
CCTCGGCGGCGCGGTAATCGACGGTGCAATTCGCGATGTCGCCGATATGCGGCGACTCAAGTTCAACATGTTCTGCCGCT
CGGTGGTGCCGCGCGGTCCGCATCACGGTTTCGGTGGCACGGTCGATACGACCATTGCGGCGGCGGGCGCGCCTGTCAGT
CCCGGCGATATCGTGCTCGGCGACGACGACGGCGTGGTGATCGTGCCGCTCGCGATCGCCGAAGAAGTGCTCAAGGCGGC
GCAAGCCCATCTGCTGAAGGAGGCGAAGTGGATCGATGGCATTCGAGGCGGGGTGTCGATCAGCGAGATGTTCGCGCTGC
CGCAGGCGCAAACCACGACGCATCCGACGGCGCTGGGCCAGGCGCAAGCAGCGGAACCGCAGCGTTAG

Upstream 100 bases:

>100_bases
GCGCAGATGCTGGTCGATTATCTGGTGCACGGACGCCTGCGCAACAACGTCAATCCGGCCTGGCAGCACGCCACCCCTTC
AACCCGATAAAGCGAACGTC

Downstream 100 bases:

>100_bases
CGCGGATGCATGCGCGGCGCGCGGAGCAAACGGATCTACCCGCCCGCTTGCGCAACGTGCTGTGCCTGAACGATTTCGCG
AACGTGGCGAAGCGCCGTTT

Product: putative dimethylmenaquinone methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MAYQQLYVSFTLLSDDVLAQWRLIPPAVASDCMNRTQVMASIIKPINAGVRLCGQARTVATMVGDCGPICNLIGSARPGE
ILVVDAGGAEDIAVWGGVMTEEAVHRGLGGAVIDGAIRDVADMRRLKFNMFCRSVVPRGPHHGFGGTVDTTIAAAGAPVS
PGDIVLGDDDGVVIVPLAIAEEVLKAAQAHLLKEAKWIDGIRGGVSISEMFALPQAQTTTHPTALGQAQAAEPQR

Sequences:

>Translated_235_residues
MAYQQLYVSFTLLSDDVLAQWRLIPPAVASDCMNRTQVMASIIKPINAGVRLCGQARTVATMVGDCGPICNLIGSARPGE
ILVVDAGGAEDIAVWGGVMTEEAVHRGLGGAVIDGAIRDVADMRRLKFNMFCRSVVPRGPHHGFGGTVDTTIAAAGAPVS
PGDIVLGDDDGVVIVPLAIAEEVLKAAQAHLLKEAKWIDGIRGGVSISEMFALPQAQTTTHPTALGQAQAAEPQR
>Mature_234_residues
AYQQLYVSFTLLSDDVLAQWRLIPPAVASDCMNRTQVMASIIKPINAGVRLCGQARTVATMVGDCGPICNLIGSARPGEI
LVVDAGGAEDIAVWGGVMTEEAVHRGLGGAVIDGAIRDVADMRRLKFNMFCRSVVPRGPHHGFGGTVDTTIAAAGAPVSP
GDIVLGDDDGVVIVPLAIAEEVLKAAQAHLLKEAKWIDGIRGGVSISEMFALPQAQTTTHPTALGQAQAAEPQR

Specific function: Regulator Of Rnase E/Rne, Which Inhibits The Endonuclease Activity And Thereby Leads To Increase The Half-Life And Abundance Of Rnas. General Modulator Of RNA Abundance. Does Not Have Any Methyltransferase Activity. [C]

COG id: COG0684

COG function: function code H; Demethylmenaquinone methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RraA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005493 [H]

Pfam domain/function: PF03737 Methyltransf_6 [H]

EC number: NA

Molecular weight: Translated: 24560; Mature: 24428

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYQQLYVSFTLLSDDVLAQWRLIPPAVASDCMNRTQVMASIIKPINAGVRLCGQARTVA
CCCHHEEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
TMVGDCGPICNLIGSARPGEILVVDAGGAEDIAVWGGVMTEEAVHRGLGGAVIDGAIRDV
HHHHCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHCCHHHHHHHHHCCCCHHHHHHHHHH
ADMRRLKFNMFCRSVVPRGPHHGFGGTVDTTIAAAGAPVSPGDIVLGDDDGVVIVPLAIA
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCEEEEEHHHH
EEVLKAAQAHLLKEAKWIDGIRGGVSISEMFALPQAQTTTHPTALGQAQAAEPQR
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCHHHCCCCCCCCCC
>Mature Secondary Structure 
AYQQLYVSFTLLSDDVLAQWRLIPPAVASDCMNRTQVMASIIKPINAGVRLCGQARTVA
CCHHEEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
TMVGDCGPICNLIGSARPGEILVVDAGGAEDIAVWGGVMTEEAVHRGLGGAVIDGAIRDV
HHHHCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHCCHHHHHHHHHCCCCHHHHHHHHHH
ADMRRLKFNMFCRSVVPRGPHHGFGGTVDTTIAAAGAPVSPGDIVLGDDDGVVIVPLAIA
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCEEEEEHHHH
EEVLKAAQAHLLKEAKWIDGIRGGVSISEMFALPQAQTTTHPTALGQAQAAEPQR
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]