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The map label for this gene is lpsE [H]

Identifier: 91783299

GI number: 91783299

Start: 2148982

End: 2150136

Strand: Direct

Name: lpsE [H]

Synonym: Bxe_A2519

Alternate gene names: 91783299

Gene position: 2148982-2150136 (Clockwise)

Preceding gene: 91783298

Following gene: 91783302

Centisome position: 43.89

GC content: 68.05

Gene sequence:

>1155_bases
ATGAAAATCATTCACCTCGCCAATCACGCGAAATGCATCGGCAACGGCATCGTCAACGTGATGATCGACCTGGCCTGCCT
GCAGGCGCGCGCCGGCCACGACGTGACGGTGGCGTCGGCCGGCGGCGGCTTCGAGGCGTTGCTGGCGCGGCACGGCGTGC
GCCATGTGCTGCTGCCGCAGTCGCCCAGACCGTCCCGCGTGGTGGGCATGGTGGCGGCCTTCAGACGCCTCGTCGCGCAG
TACGATCCCGACGTCGTGCACGCGCACATGATGACCGGCGCGTTGATCGCGCGCATGAGCGCGCTGCGGCGCCGCTACGT
GCTGATCACGACGGTGCACAACGAGTTTCAGCGCAGCGCGACGCTGATGGGCGTGGGCGACCACGTAGTGGCGGTCAGCG
ATGCGGTGGCCGTGGCAATGGCGCGGCGCGGCATTGCGCGGGAGCGTCTGAGCGTGGTGCGTAACGGCACGATCGGCACG
CCGCGCCTCGCCGACACGCCGATGCCCGCACAGCCGCAACTCGCGCATCCATGCGTCGTCACGGTGTCGGGCATGTATGA
ACGCAAGGGCATCGGCGATCTGCTGCACGCCTTCGTGCTGCTGCACGAGCGCGTGCCGGACGCGGTGCTGTATCTCGTGG
GCGACGGGCCGGACCGTGTTGCAATGGAGGCGTTGGCGCGGCAGCTGGGTGTCGCCGCGCAGGTGCGTTTCGAAGGTTTT
GTCGCGGACCCGCGTGCGTATCTCGCCCAGGCCGATGTGTTCGTGCTCGCTTCGCACTATGAAGCCGCCGGGCTCGTGCT
GTGCGAAGCGCGTGAGCTGGGGCGCGCGATCGTGGCGACGCGCGTGGGCGGCATTCCCGAGATGCTCGACGGCGGCGAAG
CCGGCGTACTGGTGCCGGTGCAGGATCCCGCTGCATTGGCGGAAGCGATCGGGCATCTCATGACCGCGCGCGACGCGCAT
GCGGCGCTGACCGCGCGCGCGCCGTACAAGCTCGAAAAATTCAGCGTGCAGCAGGTGAGCGACGGCTATCTGTCGATCTA
CGAACGCACGTTGGCAAGTTGCCAGCCGCGCCGTTTTGCGAGCATCGCCACGCGTGGGATGACTGCACCGGGCAGGGTGG
TGCGCGACAGCGTCACGCAATCGACCACGATCTGA

Upstream 100 bases:

>100_bases
AAGAAGACGCGTACGGCAAAGCGCTGATGTACCGCTTCACGCCGCAAACGGCGCCGCCTGCCGCGGCCGCCTCTCACTCA
ACGACTGTTGCGCAGACTCC

Downstream 100 bases:

>100_bases
TAGAACGGGCCGCGCACAGCGACCCGCCTGTTGAACCCGCCGTCCTCCGGACTTAGCTGCTGGTGGACGGCGTAAAGCGC
GCCCAGAGCTTGTAGACGAC

Product: putative lipopolysaccharide core biosynthesis glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MKIIHLANHAKCIGNGIVNVMIDLACLQARAGHDVTVASAGGGFEALLARHGVRHVLLPQSPRPSRVVGMVAAFRRLVAQ
YDPDVVHAHMMTGALIARMSALRRRYVLITTVHNEFQRSATLMGVGDHVVAVSDAVAVAMARRGIARERLSVVRNGTIGT
PRLADTPMPAQPQLAHPCVVTVSGMYERKGIGDLLHAFVLLHERVPDAVLYLVGDGPDRVAMEALARQLGVAAQVRFEGF
VADPRAYLAQADVFVLASHYEAAGLVLCEARELGRAIVATRVGGIPEMLDGGEAGVLVPVQDPAALAEAIGHLMTARDAH
AALTARAPYKLEKFSVQQVSDGYLSIYERTLASCQPRRFASIATRGMTAPGRVVRDSVTQSTTI

Sequences:

>Translated_384_residues
MKIIHLANHAKCIGNGIVNVMIDLACLQARAGHDVTVASAGGGFEALLARHGVRHVLLPQSPRPSRVVGMVAAFRRLVAQ
YDPDVVHAHMMTGALIARMSALRRRYVLITTVHNEFQRSATLMGVGDHVVAVSDAVAVAMARRGIARERLSVVRNGTIGT
PRLADTPMPAQPQLAHPCVVTVSGMYERKGIGDLLHAFVLLHERVPDAVLYLVGDGPDRVAMEALARQLGVAAQVRFEGF
VADPRAYLAQADVFVLASHYEAAGLVLCEARELGRAIVATRVGGIPEMLDGGEAGVLVPVQDPAALAEAIGHLMTARDAH
AALTARAPYKLEKFSVQQVSDGYLSIYERTLASCQPRRFASIATRGMTAPGRVVRDSVTQSTTI
>Mature_384_residues
MKIIHLANHAKCIGNGIVNVMIDLACLQARAGHDVTVASAGGGFEALLARHGVRHVLLPQSPRPSRVVGMVAAFRRLVAQ
YDPDVVHAHMMTGALIARMSALRRRYVLITTVHNEFQRSATLMGVGDHVVAVSDAVAVAMARRGIARERLSVVRNGTIGT
PRLADTPMPAQPQLAHPCVVTVSGMYERKGIGDLLHAFVLLHERVPDAVLYLVGDGPDRVAMEALARQLGVAAQVRFEGF
VADPRAYLAQADVFVLASHYEAAGLVLCEARELGRAIVATRVGGIPEMLDGGEAGVLVPVQDPAALAEAIGHLMTARDAH
AALTARAPYKLEKFSVQQVSDGYLSIYERTLASCQPRRFASIATRGMTAPGRVVRDSVTQSTTI

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI1788357, Length=242, Percent_Identity=29.7520661157025, Blast_Score=63, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24654571, Length=171, Percent_Identity=31.5789473684211, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 41055; Mature: 41055

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS00041 HTH_ARAC_FAMILY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIHLANHAKCIGNGIVNVMIDLACLQARAGHDVTVASAGGGFEALLARHGVRHVLLPQ
CEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCEEECCC
SPRPSRVVGMVAAFRRLVAQYDPDVVHAHMMTGALIARMSALRRRYVLITTVHNEFQRSA
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHH
TLMGVGDHVVAVSDAVAVAMARRGIARERLSVVRNGTIGTPRLADTPMPAQPQLAHPCVV
EEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEE
TVSGMYERKGIGDLLHAFVLLHERVPDAVLYLVGDGPDRVAMEALARQLGVAAQVRFEGF
EECCCHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCEEEEEECCE
VADPRAYLAQADVFVLASHYEAAGLVLCEARELGRAIVATRVGGIPEMLDGGEAGVLVPV
ECCCHHHHHHCCEEEEECCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEC
QDPAALAEAIGHLMTARDAHAALTARAPYKLEKFSVQQVSDGYLSIYERTLASCQPRRFA
CCHHHHHHHHHHHHHHCCHHHHEECCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHH
SIATRGMTAPGRVVRDSVTQSTTI
HHHHCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKIIHLANHAKCIGNGIVNVMIDLACLQARAGHDVTVASAGGGFEALLARHGVRHVLLPQ
CEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCEEECCC
SPRPSRVVGMVAAFRRLVAQYDPDVVHAHMMTGALIARMSALRRRYVLITTVHNEFQRSA
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHH
TLMGVGDHVVAVSDAVAVAMARRGIARERLSVVRNGTIGTPRLADTPMPAQPQLAHPCVV
EEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEE
TVSGMYERKGIGDLLHAFVLLHERVPDAVLYLVGDGPDRVAMEALARQLGVAAQVRFEGF
EECCCHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCEEEEEECCE
VADPRAYLAQADVFVLASHYEAAGLVLCEARELGRAIVATRVGGIPEMLDGGEAGVLVPV
ECCCHHHHHHCCEEEEECCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHCCCCCEEEEEC
QDPAALAEAIGHLMTARDAHAALTARAPYKLEKFSVQQVSDGYLSIYERTLASCQPRRFA
CCHHHHHHHHHHHHHHCCHHHHEECCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHH
SIATRGMTAPGRVVRDSVTQSTTI
HHHHCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]