| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is wcaA [C]
Identifier: 91783302
GI number: 91783302
Start: 2151985
End: 2152977
Strand: Direct
Name: wcaA [C]
Synonym: Bxe_A2517
Alternate gene names: 91783302
Gene position: 2151985-2152977 (Clockwise)
Preceding gene: 91783299
Following gene: 91783303
Centisome position: 43.96
GC content: 68.18
Gene sequence:
>993_bases ATGAGTGATCGTACCGGCGACCCGCAAGGAGGCGGCGCGTCTGAACTGGATGCGCGGCTGATCTCCATCTGCATTCCCAC CTGCAACCGGCCCGCATTGCTCGAACAGGCCATCGCGAGTTGCCACGCGCAGACGTATGGCGAGTTCGAAATCGTGATCG GCGACGATTCGACCGAGGACAGCGCGCAGCAGGTGGTGGAGCGCTGCCGCTCGCGCAGCGACCGGCCCATTCGTTACGAA CGCAATGTGCCGCGGCTCGGCCAGGCGTCCAATGTCAACCGGTTGTTCGCGCGCGCACACGGTGCCCGGCTCGTACTGCT GCACGACGACGATCTGCTCGAACCGGACGCGTTGAGCCGTCTCGACGCATGCTGGCAAGCCTGTCCGGAGTTGACAGCGG CATTCGGCAAGCAGCGCGTGATCGCCGACGACGGCACGCCGCGGCCCGACGCCAGCGAACGCCTGAACCGTGACTATCGC CGTGTGCCCGGCCGTGCCGGAAGGCTGCCCGTGCCGGCGCTGGCCGGCATCGACCAGATGTTCCCGAACAACGGCTATCT GGTGAATACCGTGGACGCGCGCCGCATCGCGTACCGGCCGGCGGCCGAAGTCGGCGAAGCGTGCGACTTCGATTTCGGCC TGCGGCTGAGCGTCGCCGCAACGGCGATCTGCTTCGTGGACGAGTTCGTGTCCGTATCGCGCGAAACGGCGTTGTCGATT TCAACGCATGCGCTGCCCGCCATGCACGCGTTTGCGCAGCTACGCGAGAGCCATGTGCCCGCCGCGGCGCAGGCCGCGCG CGAAGATGCGTTGCGCCGCGTGGCGCCGCGCGCGGCCTCGGCCTATGCGCGTGCGGGCGAGCCGGCCGCGGCCTGGCGCG TGCTGCTGTCGAAGCATTACCCGATGCGCGACAGATTGCGCGCACGTTTTCTCTATCACGTGCTGCTCGCCGCGCGCTCG ACGTTCGCGCTGCGCGCGCCGCACGGCAACTGA
Upstream 100 bases:
>100_bases ATCATCAAACGGGGTTTGACAATGAAGCGTGCCGGATTCGAGCGCCGCTCGCGAGCCAGAATGCAAAGCGGCCTGAGCGC AAACGGTTTGCGGAGCACAC
Downstream 100 bases:
>100_bases CCTTGCTGTCCGCTGCTGATGCCATGTGCCACAGGCATTCGCCGATATATCGGACTCCGAGACAATGTGGCGGGACGTAC AGAGCAATCATGCGATGTCT
Product: putative glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MSDRTGDPQGGGASELDARLISICIPTCNRPALLEQAIASCHAQTYGEFEIVIGDDSTEDSAQQVVERCRSRSDRPIRYE RNVPRLGQASNVNRLFARAHGARLVLLHDDDLLEPDALSRLDACWQACPELTAAFGKQRVIADDGTPRPDASERLNRDYR RVPGRAGRLPVPALAGIDQMFPNNGYLVNTVDARRIAYRPAAEVGEACDFDFGLRLSVAATAICFVDEFVSVSRETALSI STHALPAMHAFAQLRESHVPAAAQAAREDALRRVAPRAASAYARAGEPAAAWRVLLSKHYPMRDRLRARFLYHVLLAARS TFALRAPHGN
Sequences:
>Translated_330_residues MSDRTGDPQGGGASELDARLISICIPTCNRPALLEQAIASCHAQTYGEFEIVIGDDSTEDSAQQVVERCRSRSDRPIRYE RNVPRLGQASNVNRLFARAHGARLVLLHDDDLLEPDALSRLDACWQACPELTAAFGKQRVIADDGTPRPDASERLNRDYR RVPGRAGRLPVPALAGIDQMFPNNGYLVNTVDARRIAYRPAAEVGEACDFDFGLRLSVAATAICFVDEFVSVSRETALSI STHALPAMHAFAQLRESHVPAAAQAAREDALRRVAPRAASAYARAGEPAAAWRVLLSKHYPMRDRLRARFLYHVLLAARS TFALRAPHGN >Mature_329_residues SDRTGDPQGGGASELDARLISICIPTCNRPALLEQAIASCHAQTYGEFEIVIGDDSTEDSAQQVVERCRSRSDRPIRYER NVPRLGQASNVNRLFARAHGARLVLLHDDDLLEPDALSRLDACWQACPELTAAFGKQRVIADDGTPRPDASERLNRDYRR VPGRAGRLPVPALAGIDQMFPNNGYLVNTVDARRIAYRPAAEVGEACDFDFGLRLSVAATAICFVDEFVSVSRETALSIS THALPAMHAFAQLRESHVPAAAQAAREDALRRVAPRAASAYARAGEPAAAWRVLLSKHYPMRDRLRARFLYHVLLAARST FALRAPHGN
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 36191; Mature: 36060
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRTGDPQGGGASELDARLISICIPTCNRPALLEQAIASCHAQTYGEFEIVIGDDSTED CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCH SAQQVVERCRSRSDRPIRYERNVPRLGQASNVNRLFARAHGARLVLLHDDDLLEPDALSR HHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCHHHHHH LDACWQACPELTAAFGKQRVIADDGTPRPDASERLNRDYRRVPGRAGRLPVPALAGIDQM HHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHCHHHHHCCCCCCCCCCHHHHHHHHH FPNNGYLVNTVDARRIAYRPAAEVGEACDFDFGLRLSVAATAICFVDEFVSVSRETALSI CCCCCEEEECCCHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH STHALPAMHAFAQLRESHVPAAAQAAREDALRRVAPRAASAYARAGEPAAAWRVLLSKHY HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC PMRDRLRARFLYHVLLAARSTFALRAPHGN CHHHHHHHHHHHHHHHHHHHHEEEECCCCC >Mature Secondary Structure SDRTGDPQGGGASELDARLISICIPTCNRPALLEQAIASCHAQTYGEFEIVIGDDSTED CCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCH SAQQVVERCRSRSDRPIRYERNVPRLGQASNVNRLFARAHGARLVLLHDDDLLEPDALSR HHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCHHHHHH LDACWQACPELTAAFGKQRVIADDGTPRPDASERLNRDYRRVPGRAGRLPVPALAGIDQM HHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHCHHHHHCCCCCCCCCCHHHHHHHHH FPNNGYLVNTVDARRIAYRPAAEVGEACDFDFGLRLSVAATAICFVDEFVSVSRETALSI CCCCCEEEECCCHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH STHALPAMHAFAQLRESHVPAAAQAAREDALRRVAPRAASAYARAGEPAAAWRVLLSKHY HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC PMRDRLRARFLYHVLLAARSTFALRAPHGN CHHHHHHHHHHHHHHHHHHHHEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]