| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91783160
Identifier: 91783160
GI number: 91783160
Start: 2007485
End: 2008972
Strand: Direct
Name: 91783160
Synonym: Bxe_A2645
Alternate gene names: NA
Gene position: 2007485-2008972 (Clockwise)
Preceding gene: 91783159
Following gene: 91783161
Centisome position: 41.0
GC content: 67.0
Gene sequence:
>1488_bases ATGGCGCAGACAACTTCCGCGCAGGAGGCCGATCCGGTCATCAACGTGATCGAGCAGGACGTGCCGGGTAGCAGTGGCGG ACCGGCTCCGTCGAACGATCGTCAGGGCACGCTGGATTCGGCCGCGATGGATGCCGTATCCGCCCGGCGTCGGCGCGAGT TTGATGCCGCCCGCGCGAGACTGCGCGATCAGGCAATGCGCGACGATCCCGGCATGTCGCGACAGGCCGGCGGCCACGCA CCCGCCGACGCGGCGGGCGAGGTGAATCGCGGTCGTGCGCCGATCGACCAGCCGCCGGAACGCGTGCGCAAGCGCTACTT GCGTGCGGGAAACCAGTATTTCCTGAAGGATGCGCCGTATCAACTCGCGTTCGAGGATCTGGGCCCTTACCTCGTTACCG AACACAACCGCCCGGACGTGGTCGAGTCGATGATTGAAATGGTGCATGCCAAATCGTGGCAGCGTATCCGCGTGTCGGGC CACGAGGCGTTTCGCAGCGAGGTATGGCTGCAGGCGACGCTGCTTGGCATCGAGGTGAGCGGTTATGAGCCGAACGCGGC CGACCTGGCCCGTCTGGCGGATGCCCGGCAGGCTCGCCTGGACAATCGCATTGAGGTCGCGAGGGACGTCGCGGCGACGA CCACGTCGGGCACACGCGGTCGAACCGATGCGCGGCCCGTACCTGCAGCGGCTCCATCGGTCGATACGGGCGCCGCCGTC AACGGAGCCTCGTCCCCCGCACCGGGGCATGACGCTGTATCGGAGCCGCGCTCTCCGGCAGCAAGCCGGAACGCTGCAGA CGACGAACCTGATGCTCCGCGACGGTATGTTGGCGAATTGCGCGAGCACGGCAGTGCGCCGTATCTGCACAATCCGGCGC GCAGCGACTCCTATTACGTGGTGTTCCGCGACCCGTCGGGAATCGATCAGGCGGTATGGGGTGTGGACCTTGAACGTGCC ATGCGTGAATCGGTGGCCGTGATCGGGCAGGAGGTGGTGCTCGAGAACCTCGGCAAGCGTCTGGTGACCGTGCGGGTGCC GGTCCTCGATGGCGCAGGCAGGGTGATCGGTGAGGAAGACAAGGACGTTTATCGGAATACCTGGCAGGCGGAGGTCACGC AGCGTGACCAGACAGTTTCCCTCTCGCCTGCGCAACCCGCTGGTCCGGCGGATAGCGAGCCGCAGCGACGTGGTACGCCA CGCCCGGAAAGCGAACAGACGCTCCATCTGGCCGTACTGACCGCAGCGATGCGGGAGCAGGGCTTTAGCGAACGCTCGAT TGCTCGCGTGCAGCAGCGCGCGGCACGCATGCTGGTCGCGTTCGGGACGGAGGGGATTCCGGTTCCGACGCCGAAGGTGT TCGATCCAAAGGCGCCGTCGGGCCGGGATCGTCGGGATCGCAAGACGCGCCCTGCACCCGAGCGCGAACCGGCTCGCGAG ATCGACCGGACGCCGGCCGAGCCGTCGCCGATGGCTCCCTCGCGTTGA
Upstream 100 bases:
>100_bases CAGGGCGCGTCTCGCGAAGCGGGCACGGAACCCGACCGATAACGCACCCCAACGTGGTTCCCACATGAAAAACCATTCCT GAAAGATGCGAGGTGGCGAC
Downstream 100 bases:
>100_bases GGTGAATCGTGGTTGCGCGCGAGCGGCTGTGTGTCGAACTTGGGGCAGCGAGGTTGCGCTGGGACGACTGGTGCATGCGC CGTGGTTTGACGGCAGGCGA
Product: putative DNA primase, DNA transfer TraO- like protein
Products: NA
Alternate protein names: DNA Primase DNA Transfer TraO- Like Protein; Relaxase; DNA Primase; DNA Primase TraC
Number of amino acids: Translated: 495; Mature: 494
Protein sequence:
>495_residues MAQTTSAQEADPVINVIEQDVPGSSGGPAPSNDRQGTLDSAAMDAVSARRRREFDAARARLRDQAMRDDPGMSRQAGGHA PADAAGEVNRGRAPIDQPPERVRKRYLRAGNQYFLKDAPYQLAFEDLGPYLVTEHNRPDVVESMIEMVHAKSWQRIRVSG HEAFRSEVWLQATLLGIEVSGYEPNAADLARLADARQARLDNRIEVARDVAATTTSGTRGRTDARPVPAAAPSVDTGAAV NGASSPAPGHDAVSEPRSPAASRNAADDEPDAPRRYVGELREHGSAPYLHNPARSDSYYVVFRDPSGIDQAVWGVDLERA MRESVAVIGQEVVLENLGKRLVTVRVPVLDGAGRVIGEEDKDVYRNTWQAEVTQRDQTVSLSPAQPAGPADSEPQRRGTP RPESEQTLHLAVLTAAMREQGFSERSIARVQQRAARMLVAFGTEGIPVPTPKVFDPKAPSGRDRRDRKTRPAPEREPARE IDRTPAEPSPMAPSR
Sequences:
>Translated_495_residues MAQTTSAQEADPVINVIEQDVPGSSGGPAPSNDRQGTLDSAAMDAVSARRRREFDAARARLRDQAMRDDPGMSRQAGGHA PADAAGEVNRGRAPIDQPPERVRKRYLRAGNQYFLKDAPYQLAFEDLGPYLVTEHNRPDVVESMIEMVHAKSWQRIRVSG HEAFRSEVWLQATLLGIEVSGYEPNAADLARLADARQARLDNRIEVARDVAATTTSGTRGRTDARPVPAAAPSVDTGAAV NGASSPAPGHDAVSEPRSPAASRNAADDEPDAPRRYVGELREHGSAPYLHNPARSDSYYVVFRDPSGIDQAVWGVDLERA MRESVAVIGQEVVLENLGKRLVTVRVPVLDGAGRVIGEEDKDVYRNTWQAEVTQRDQTVSLSPAQPAGPADSEPQRRGTP RPESEQTLHLAVLTAAMREQGFSERSIARVQQRAARMLVAFGTEGIPVPTPKVFDPKAPSGRDRRDRKTRPAPEREPARE IDRTPAEPSPMAPSR >Mature_494_residues AQTTSAQEADPVINVIEQDVPGSSGGPAPSNDRQGTLDSAAMDAVSARRRREFDAARARLRDQAMRDDPGMSRQAGGHAP ADAAGEVNRGRAPIDQPPERVRKRYLRAGNQYFLKDAPYQLAFEDLGPYLVTEHNRPDVVESMIEMVHAKSWQRIRVSGH EAFRSEVWLQATLLGIEVSGYEPNAADLARLADARQARLDNRIEVARDVAATTTSGTRGRTDARPVPAAAPSVDTGAAVN GASSPAPGHDAVSEPRSPAASRNAADDEPDAPRRYVGELREHGSAPYLHNPARSDSYYVVFRDPSGIDQAVWGVDLERAM RESVAVIGQEVVLENLGKRLVTVRVPVLDGAGRVIGEEDKDVYRNTWQAEVTQRDQTVSLSPAQPAGPADSEPQRRGTPR PESEQTLHLAVLTAAMREQGFSERSIARVQQRAARMLVAFGTEGIPVPTPKVFDPKAPSGRDRRDRKTRPAPEREPAREI DRTPAEPSPMAPSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53895; Mature: 53764
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQTTSAQEADPVINVIEQDVPGSSGGPAPSNDRQGTLDSAAMDAVSARRRREFDAARAR CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LRDQAMRDDPGMSRQAGGHAPADAAGEVNRGRAPIDQPPERVRKRYLRAGNQYFLKDAPY HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCC QLAFEDLGPYLVTEHNRPDVVESMIEMVHAKSWQRIRVSGHEAFRSEVWLQATLLGIEVS CHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHEEEEEEEEEEC GYEPNAADLARLADARQARLDNRIEVARDVAATTTSGTRGRTDARPVPAAAPSVDTGAAV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC NGASSPAPGHDAVSEPRSPAASRNAADDEPDAPRRYVGELREHGSAPYLHNPARSDSYYV CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEE VFRDPSGIDQAVWGVDLERAMRESVAVIGQEVVLENLGKRLVTVRVPVLDGAGRVIGEED EEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCC KDVYRNTWQAEVTQRDQTVSLSPAQPAGPADSEPQRRGTPRPESEQTLHLAVLTAAMREQ HHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHC GFSERSIARVQQRAARMLVAFGTEGIPVPTPKVFDPKAPSGRDRRDRKTRPAPEREPARE CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHH IDRTPAEPSPMAPSR HHCCCCCCCCCCCCC >Mature Secondary Structure AQTTSAQEADPVINVIEQDVPGSSGGPAPSNDRQGTLDSAAMDAVSARRRREFDAARAR CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LRDQAMRDDPGMSRQAGGHAPADAAGEVNRGRAPIDQPPERVRKRYLRAGNQYFLKDAPY HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCC QLAFEDLGPYLVTEHNRPDVVESMIEMVHAKSWQRIRVSGHEAFRSEVWLQATLLGIEVS CHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHEEEEEEEEEEC GYEPNAADLARLADARQARLDNRIEVARDVAATTTSGTRGRTDARPVPAAAPSVDTGAAV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC NGASSPAPGHDAVSEPRSPAASRNAADDEPDAPRRYVGELREHGSAPYLHNPARSDSYYV CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEE VFRDPSGIDQAVWGVDLERAMRESVAVIGQEVVLENLGKRLVTVRVPVLDGAGRVIGEED EEECCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCC KDVYRNTWQAEVTQRDQTVSLSPAQPAGPADSEPQRRGTPRPESEQTLHLAVLTAAMREQ HHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHC GFSERSIARVQQRAARMLVAFGTEGIPVPTPKVFDPKAPSGRDRRDRKTRPAPEREPARE CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHH IDRTPAEPSPMAPSR HHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA