| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91783159
Identifier: 91783159
GI number: 91783159
Start: 2005564
End: 2007426
Strand: Direct
Name: 91783159
Synonym: Bxe_A2646
Alternate gene names: NA
Gene position: 2005564-2007426 (Clockwise)
Preceding gene: 91783158
Following gene: 91783160
Centisome position: 40.96
GC content: 65.16
Gene sequence:
>1863_bases ATGACTGCGCCCTATGTGGATGAAGCGAACCGTGCGCGTGCCGCGCTTGCCGTGATTCCAGCCGACGACTACGAGACCTG GGTCGATATGGCGTTCGCGCTCAAACAGGGATTCGGCGACGAGGGCTTCGAGATCTGGGACGCGTGGAGCCGCACGGCGG CTAACTATGACGAGCGCGCGGCCCGGACGACCTGGCGCTCCGTCAGCGAGTCGGGCGGCAAGACGCTCGCCACCCTGTTC TGGCGAGCGCGCGAGCACGGCTTCGATCTCAGGCGCACGCATTACCCGGACCGTATGACCGCCGTGCTCGCGTCATCTCC CGAGGTACTGGCGCAGCGCGAGCGTGAGGAAGTGCAGCGCCAGGCACGTCACGCAGCCGTTGCTCGCGAAGCTGTATCGA TCTGGCAATGGGCGCGGCCGGTCGGACCAGAGCATCCGTATCTTGCGCGCAAGCACGTCGATCCGATGGAAACGTTGCGC GAACTCGATGCGCTGGAACTGCATGCATTGCTCGGCTATGCGCCCGCCAGCGAGGAAAGACCGCTGACTGGCCGCGTGCT GATCGTGCCCGTGTGGAATGGACCGATCTCGACACTGGAGCTGATCGACGAGCAGGGACGGAAGTCGTCACTCGCCGGTG GCGCGAAGAAAGGTGGCTACTGGATGACGGAGCCAAGGCTGGCTCCGGCCGGCGAATCGTCGCTGATCCTGGTCGCCGAG GGTATGGCGACGGCGTTGTCCGCCTCGCGTGCGACGGACTGGTTTGCGGTAGCCGCGCTATCGAGCGGGAATCTCGAAAC AGTCGCGCGGAGCCTGCGCGAACGGTACCCCGATGCAGATCTGGTCGTCCTGGGTGAACTGGGCAATGGCGAGGCGCAGG CCCGGCGAGCAGCGGAAGACGCGCGGGCGTATCTGGCCTGGCCGCAGTTCGCTGCGGACGCGCGCATCGACGGCAAGGTG CCGAACGATTTCAGCGACATGGTGGTGCTGTCTGGCTTCGATGCCGTCGGCGAGCACCTGCGTGCGGTGGTTCGCTCTGT TGTGCGGGCCGATGGCGAGTCGAAGTCGGATGTTCCCACCCCATCCGCCGTGACCGTAGTTGAGGTGGACAAGCGTGAGG AGGACGGAAAAATGGGCAACGTCAAGGAAAAGCTGTTGGGCGACGCAGGAGATGGTCCGCGTCGCCGGTCGTCGAAGCGT GGTGCGTCGAAACAGGAAGGGCCGGATGCGCCGGCAACGGAACCGGCATCCTCCGCTGCGGCGCCGTCGGCCGACTCTTC GGCGGCAGCATCGCCGGCTGCTGATCCTCCGGTGGCTGATGCACCACGCTTCGCGTCGACGCGCCCGCCGGTCGGCGAGC CCCTGTTTGGCGTTGGTGACGTTCCCAACGAAGTCAGGGCGCTGGCCGAGCATCGGTTCGGCTCACCGCTCAGGATGGGC ACGCCGCGCGAGAACGGCGGACCGTATCGCGGCGAGGTGTTCAACACGGAACACTATCTGATCCAGGAGGTCGCGACGCG CAGCGTCGTGTTCCACCGCAAGGACCGGATGACGTTCGTCAATGACCGTCTGACATGGATGAACGAAAACGCCCGGCTGA ACGGCTCCGAATTGCAGGTGGGATATGACGGCAGTCAGGCGAAGGTCTATCCGTGGGACCGTGCGCGCGATCTACTGGAT CGCACTGTTGCCTCGTTGAAGAAGTCCGCCCGGGAGCTCAATTTCAGTCCCAACCTGGAGGGCATGCTCGACCAGTTGCA GACGAGATCCTGGGCGCGTATCCGAGAAGCGCGGACCGCGGCACTGGAAAAATCGAAGGAGCAGGGCGCGTCTCGCGAAG CGGGCACGGAACCCGACCGATAA
Upstream 100 bases:
>100_bases CTGACGATCTTGACGTGGCGGAGCTCGATTTCGTTGAACCGGCGCAGCGCGCGGCCCCGAATGGTTCGCAAGCCGGCTCA CAGTCGATGGGAGCCCTGCA
Downstream 100 bases:
>100_bases CGCACCCCAACGTGGTTCCCACATGAAAAACCATTCCTGAAAGATGCGAGGTGGCGACATGGCGCAGACAACTTCCGCGC AGGAGGCCGATCCGGTCATC
Product: putative DNA replication primase protein
Products: NA
Alternate protein names: DNA Replication Primase; TOPRIM Domain-Containing Protein; Primase C 2 Family; Inner Membrane Protein; Primase C 2 Superfamily
Number of amino acids: Translated: 620; Mature: 619
Protein sequence:
>620_residues MTAPYVDEANRARAALAVIPADDYETWVDMAFALKQGFGDEGFEIWDAWSRTAANYDERAARTTWRSVSESGGKTLATLF WRAREHGFDLRRTHYPDRMTAVLASSPEVLAQREREEVQRQARHAAVAREAVSIWQWARPVGPEHPYLARKHVDPMETLR ELDALELHALLGYAPASEERPLTGRVLIVPVWNGPISTLELIDEQGRKSSLAGGAKKGGYWMTEPRLAPAGESSLILVAE GMATALSASRATDWFAVAALSSGNLETVARSLRERYPDADLVVLGELGNGEAQARRAAEDARAYLAWPQFAADARIDGKV PNDFSDMVVLSGFDAVGEHLRAVVRSVVRADGESKSDVPTPSAVTVVEVDKREEDGKMGNVKEKLLGDAGDGPRRRSSKR GASKQEGPDAPATEPASSAAAPSADSSAAASPAADPPVADAPRFASTRPPVGEPLFGVGDVPNEVRALAEHRFGSPLRMG TPRENGGPYRGEVFNTEHYLIQEVATRSVVFHRKDRMTFVNDRLTWMNENARLNGSELQVGYDGSQAKVYPWDRARDLLD RTVASLKKSARELNFSPNLEGMLDQLQTRSWARIREARTAALEKSKEQGASREAGTEPDR
Sequences:
>Translated_620_residues MTAPYVDEANRARAALAVIPADDYETWVDMAFALKQGFGDEGFEIWDAWSRTAANYDERAARTTWRSVSESGGKTLATLF WRAREHGFDLRRTHYPDRMTAVLASSPEVLAQREREEVQRQARHAAVAREAVSIWQWARPVGPEHPYLARKHVDPMETLR ELDALELHALLGYAPASEERPLTGRVLIVPVWNGPISTLELIDEQGRKSSLAGGAKKGGYWMTEPRLAPAGESSLILVAE GMATALSASRATDWFAVAALSSGNLETVARSLRERYPDADLVVLGELGNGEAQARRAAEDARAYLAWPQFAADARIDGKV PNDFSDMVVLSGFDAVGEHLRAVVRSVVRADGESKSDVPTPSAVTVVEVDKREEDGKMGNVKEKLLGDAGDGPRRRSSKR GASKQEGPDAPATEPASSAAAPSADSSAAASPAADPPVADAPRFASTRPPVGEPLFGVGDVPNEVRALAEHRFGSPLRMG TPRENGGPYRGEVFNTEHYLIQEVATRSVVFHRKDRMTFVNDRLTWMNENARLNGSELQVGYDGSQAKVYPWDRARDLLD RTVASLKKSARELNFSPNLEGMLDQLQTRSWARIREARTAALEKSKEQGASREAGTEPDR >Mature_619_residues TAPYVDEANRARAALAVIPADDYETWVDMAFALKQGFGDEGFEIWDAWSRTAANYDERAARTTWRSVSESGGKTLATLFW RAREHGFDLRRTHYPDRMTAVLASSPEVLAQREREEVQRQARHAAVAREAVSIWQWARPVGPEHPYLARKHVDPMETLRE LDALELHALLGYAPASEERPLTGRVLIVPVWNGPISTLELIDEQGRKSSLAGGAKKGGYWMTEPRLAPAGESSLILVAEG MATALSASRATDWFAVAALSSGNLETVARSLRERYPDADLVVLGELGNGEAQARRAAEDARAYLAWPQFAADARIDGKVP NDFSDMVVLSGFDAVGEHLRAVVRSVVRADGESKSDVPTPSAVTVVEVDKREEDGKMGNVKEKLLGDAGDGPRRRSSKRG ASKQEGPDAPATEPASSAAAPSADSSAAASPAADPPVADAPRFASTRPPVGEPLFGVGDVPNEVRALAEHRFGSPLRMGT PRENGGPYRGEVFNTEHYLIQEVATRSVVFHRKDRMTFVNDRLTWMNENARLNGSELQVGYDGSQAKVYPWDRARDLLDR TVASLKKSARELNFSPNLEGMLDQLQTRSWARIREARTAALEKSKEQGASREAGTEPDR
Specific function: Unknown
COG id: COG4643
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67844; Mature: 67713
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPYVDEANRARAALAVIPADDYETWVDMAFALKQGFGDEGFEIWDAWSRTAANYDERA CCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHH ARTTWRSVSESGGKTLATLFWRAREHGFDLRRTHYPDRMTAVLASSPEVLAQREREEVQR HHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHH QARHAAVAREAVSIWQWARPVGPEHPYLARKHVDPMETLRELDALELHALLGYAPASEER HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC PLTGRVLIVPVWNGPISTLELIDEQGRKSSLAGGAKKGGYWMTEPRLAPAGESSLILVAE CCCCCEEEEEECCCCHHHHHHHHHCCCHHHHCCCCCCCCEECCCCCCCCCCCCCEEEEEC GMATALSASRATDWFAVAALSSGNLETVARSLRERYPDADLVVLGELGNGEAQARRAAED CHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHH ARAYLAWPQFAADARIDGKVPNDFSDMVVLSGFDAVGEHLRAVVRSVVRADGESKSDVPT HHHEECCCCHHCCCCCCCCCCCCHHHHHEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCC PSAVTVVEVDKREEDGKMGNVKEKLLGDAGDGPRRRSSKRGASKQEGPDAPATEPASSAA CCEEEEEEECCCCCCCCCCCHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC APSADSSAAASPAADPPVADAPRFASTRPPVGEPLFGVGDVPNEVRALAEHRFGSPLRMG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC TPRENGGPYRGEVFNTEHYLIQEVATRSVVFHRKDRMTFVNDRLTWMNENARLNGSELQV CCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCCCCEEECCCCEEECCCCEECCCEEEE GYDGSQAKVYPWDRARDLLDRTVASLKKSARELNFSPNLEGMLDQLQTRSWARIREARTA EECCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH ALEKSKEQGASREAGTEPDR HHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TAPYVDEANRARAALAVIPADDYETWVDMAFALKQGFGDEGFEIWDAWSRTAANYDERA CCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHH ARTTWRSVSESGGKTLATLFWRAREHGFDLRRTHYPDRMTAVLASSPEVLAQREREEVQR HHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHH QARHAAVAREAVSIWQWARPVGPEHPYLARKHVDPMETLRELDALELHALLGYAPASEER HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC PLTGRVLIVPVWNGPISTLELIDEQGRKSSLAGGAKKGGYWMTEPRLAPAGESSLILVAE CCCCCEEEEEECCCCHHHHHHHHHCCCHHHHCCCCCCCCEECCCCCCCCCCCCCEEEEEC GMATALSASRATDWFAVAALSSGNLETVARSLRERYPDADLVVLGELGNGEAQARRAAED CHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHH ARAYLAWPQFAADARIDGKVPNDFSDMVVLSGFDAVGEHLRAVVRSVVRADGESKSDVPT HHHEECCCCHHCCCCCCCCCCCCHHHHHEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCC PSAVTVVEVDKREEDGKMGNVKEKLLGDAGDGPRRRSSKRGASKQEGPDAPATEPASSAA CCEEEEEEECCCCCCCCCCCHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC APSADSSAAASPAADPPVADAPRFASTRPPVGEPLFGVGDVPNEVRALAEHRFGSPLRMG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC TPRENGGPYRGEVFNTEHYLIQEVATRSVVFHRKDRMTFVNDRLTWMNENARLNGSELQV CCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCCCCEEECCCCEEECCCCEECCCEEEE GYDGSQAKVYPWDRARDLLDRTVASLKKSARELNFSPNLEGMLDQLQTRSWARIREARTA EECCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH ALEKSKEQGASREAGTEPDR HHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA