Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is 91783159

Identifier: 91783159

GI number: 91783159

Start: 2005564

End: 2007426

Strand: Direct

Name: 91783159

Synonym: Bxe_A2646

Alternate gene names: NA

Gene position: 2005564-2007426 (Clockwise)

Preceding gene: 91783158

Following gene: 91783160

Centisome position: 40.96

GC content: 65.16

Gene sequence:

>1863_bases
ATGACTGCGCCCTATGTGGATGAAGCGAACCGTGCGCGTGCCGCGCTTGCCGTGATTCCAGCCGACGACTACGAGACCTG
GGTCGATATGGCGTTCGCGCTCAAACAGGGATTCGGCGACGAGGGCTTCGAGATCTGGGACGCGTGGAGCCGCACGGCGG
CTAACTATGACGAGCGCGCGGCCCGGACGACCTGGCGCTCCGTCAGCGAGTCGGGCGGCAAGACGCTCGCCACCCTGTTC
TGGCGAGCGCGCGAGCACGGCTTCGATCTCAGGCGCACGCATTACCCGGACCGTATGACCGCCGTGCTCGCGTCATCTCC
CGAGGTACTGGCGCAGCGCGAGCGTGAGGAAGTGCAGCGCCAGGCACGTCACGCAGCCGTTGCTCGCGAAGCTGTATCGA
TCTGGCAATGGGCGCGGCCGGTCGGACCAGAGCATCCGTATCTTGCGCGCAAGCACGTCGATCCGATGGAAACGTTGCGC
GAACTCGATGCGCTGGAACTGCATGCATTGCTCGGCTATGCGCCCGCCAGCGAGGAAAGACCGCTGACTGGCCGCGTGCT
GATCGTGCCCGTGTGGAATGGACCGATCTCGACACTGGAGCTGATCGACGAGCAGGGACGGAAGTCGTCACTCGCCGGTG
GCGCGAAGAAAGGTGGCTACTGGATGACGGAGCCAAGGCTGGCTCCGGCCGGCGAATCGTCGCTGATCCTGGTCGCCGAG
GGTATGGCGACGGCGTTGTCCGCCTCGCGTGCGACGGACTGGTTTGCGGTAGCCGCGCTATCGAGCGGGAATCTCGAAAC
AGTCGCGCGGAGCCTGCGCGAACGGTACCCCGATGCAGATCTGGTCGTCCTGGGTGAACTGGGCAATGGCGAGGCGCAGG
CCCGGCGAGCAGCGGAAGACGCGCGGGCGTATCTGGCCTGGCCGCAGTTCGCTGCGGACGCGCGCATCGACGGCAAGGTG
CCGAACGATTTCAGCGACATGGTGGTGCTGTCTGGCTTCGATGCCGTCGGCGAGCACCTGCGTGCGGTGGTTCGCTCTGT
TGTGCGGGCCGATGGCGAGTCGAAGTCGGATGTTCCCACCCCATCCGCCGTGACCGTAGTTGAGGTGGACAAGCGTGAGG
AGGACGGAAAAATGGGCAACGTCAAGGAAAAGCTGTTGGGCGACGCAGGAGATGGTCCGCGTCGCCGGTCGTCGAAGCGT
GGTGCGTCGAAACAGGAAGGGCCGGATGCGCCGGCAACGGAACCGGCATCCTCCGCTGCGGCGCCGTCGGCCGACTCTTC
GGCGGCAGCATCGCCGGCTGCTGATCCTCCGGTGGCTGATGCACCACGCTTCGCGTCGACGCGCCCGCCGGTCGGCGAGC
CCCTGTTTGGCGTTGGTGACGTTCCCAACGAAGTCAGGGCGCTGGCCGAGCATCGGTTCGGCTCACCGCTCAGGATGGGC
ACGCCGCGCGAGAACGGCGGACCGTATCGCGGCGAGGTGTTCAACACGGAACACTATCTGATCCAGGAGGTCGCGACGCG
CAGCGTCGTGTTCCACCGCAAGGACCGGATGACGTTCGTCAATGACCGTCTGACATGGATGAACGAAAACGCCCGGCTGA
ACGGCTCCGAATTGCAGGTGGGATATGACGGCAGTCAGGCGAAGGTCTATCCGTGGGACCGTGCGCGCGATCTACTGGAT
CGCACTGTTGCCTCGTTGAAGAAGTCCGCCCGGGAGCTCAATTTCAGTCCCAACCTGGAGGGCATGCTCGACCAGTTGCA
GACGAGATCCTGGGCGCGTATCCGAGAAGCGCGGACCGCGGCACTGGAAAAATCGAAGGAGCAGGGCGCGTCTCGCGAAG
CGGGCACGGAACCCGACCGATAA

Upstream 100 bases:

>100_bases
CTGACGATCTTGACGTGGCGGAGCTCGATTTCGTTGAACCGGCGCAGCGCGCGGCCCCGAATGGTTCGCAAGCCGGCTCA
CAGTCGATGGGAGCCCTGCA

Downstream 100 bases:

>100_bases
CGCACCCCAACGTGGTTCCCACATGAAAAACCATTCCTGAAAGATGCGAGGTGGCGACATGGCGCAGACAACTTCCGCGC
AGGAGGCCGATCCGGTCATC

Product: putative DNA replication primase protein

Products: NA

Alternate protein names: DNA Replication Primase; TOPRIM Domain-Containing Protein; Primase C 2 Family; Inner Membrane Protein; Primase C 2 Superfamily

Number of amino acids: Translated: 620; Mature: 619

Protein sequence:

>620_residues
MTAPYVDEANRARAALAVIPADDYETWVDMAFALKQGFGDEGFEIWDAWSRTAANYDERAARTTWRSVSESGGKTLATLF
WRAREHGFDLRRTHYPDRMTAVLASSPEVLAQREREEVQRQARHAAVAREAVSIWQWARPVGPEHPYLARKHVDPMETLR
ELDALELHALLGYAPASEERPLTGRVLIVPVWNGPISTLELIDEQGRKSSLAGGAKKGGYWMTEPRLAPAGESSLILVAE
GMATALSASRATDWFAVAALSSGNLETVARSLRERYPDADLVVLGELGNGEAQARRAAEDARAYLAWPQFAADARIDGKV
PNDFSDMVVLSGFDAVGEHLRAVVRSVVRADGESKSDVPTPSAVTVVEVDKREEDGKMGNVKEKLLGDAGDGPRRRSSKR
GASKQEGPDAPATEPASSAAAPSADSSAAASPAADPPVADAPRFASTRPPVGEPLFGVGDVPNEVRALAEHRFGSPLRMG
TPRENGGPYRGEVFNTEHYLIQEVATRSVVFHRKDRMTFVNDRLTWMNENARLNGSELQVGYDGSQAKVYPWDRARDLLD
RTVASLKKSARELNFSPNLEGMLDQLQTRSWARIREARTAALEKSKEQGASREAGTEPDR

Sequences:

>Translated_620_residues
MTAPYVDEANRARAALAVIPADDYETWVDMAFALKQGFGDEGFEIWDAWSRTAANYDERAARTTWRSVSESGGKTLATLF
WRAREHGFDLRRTHYPDRMTAVLASSPEVLAQREREEVQRQARHAAVAREAVSIWQWARPVGPEHPYLARKHVDPMETLR
ELDALELHALLGYAPASEERPLTGRVLIVPVWNGPISTLELIDEQGRKSSLAGGAKKGGYWMTEPRLAPAGESSLILVAE
GMATALSASRATDWFAVAALSSGNLETVARSLRERYPDADLVVLGELGNGEAQARRAAEDARAYLAWPQFAADARIDGKV
PNDFSDMVVLSGFDAVGEHLRAVVRSVVRADGESKSDVPTPSAVTVVEVDKREEDGKMGNVKEKLLGDAGDGPRRRSSKR
GASKQEGPDAPATEPASSAAAPSADSSAAASPAADPPVADAPRFASTRPPVGEPLFGVGDVPNEVRALAEHRFGSPLRMG
TPRENGGPYRGEVFNTEHYLIQEVATRSVVFHRKDRMTFVNDRLTWMNENARLNGSELQVGYDGSQAKVYPWDRARDLLD
RTVASLKKSARELNFSPNLEGMLDQLQTRSWARIREARTAALEKSKEQGASREAGTEPDR
>Mature_619_residues
TAPYVDEANRARAALAVIPADDYETWVDMAFALKQGFGDEGFEIWDAWSRTAANYDERAARTTWRSVSESGGKTLATLFW
RAREHGFDLRRTHYPDRMTAVLASSPEVLAQREREEVQRQARHAAVAREAVSIWQWARPVGPEHPYLARKHVDPMETLRE
LDALELHALLGYAPASEERPLTGRVLIVPVWNGPISTLELIDEQGRKSSLAGGAKKGGYWMTEPRLAPAGESSLILVAEG
MATALSASRATDWFAVAALSSGNLETVARSLRERYPDADLVVLGELGNGEAQARRAAEDARAYLAWPQFAADARIDGKVP
NDFSDMVVLSGFDAVGEHLRAVVRSVVRADGESKSDVPTPSAVTVVEVDKREEDGKMGNVKEKLLGDAGDGPRRRSSKRG
ASKQEGPDAPATEPASSAAAPSADSSAAASPAADPPVADAPRFASTRPPVGEPLFGVGDVPNEVRALAEHRFGSPLRMGT
PRENGGPYRGEVFNTEHYLIQEVATRSVVFHRKDRMTFVNDRLTWMNENARLNGSELQVGYDGSQAKVYPWDRARDLLDR
TVASLKKSARELNFSPNLEGMLDQLQTRSWARIREARTAALEKSKEQGASREAGTEPDR

Specific function: Unknown

COG id: COG4643

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67844; Mature: 67713

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPYVDEANRARAALAVIPADDYETWVDMAFALKQGFGDEGFEIWDAWSRTAANYDERA
CCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHH
ARTTWRSVSESGGKTLATLFWRAREHGFDLRRTHYPDRMTAVLASSPEVLAQREREEVQR
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHH
QARHAAVAREAVSIWQWARPVGPEHPYLARKHVDPMETLRELDALELHALLGYAPASEER
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PLTGRVLIVPVWNGPISTLELIDEQGRKSSLAGGAKKGGYWMTEPRLAPAGESSLILVAE
CCCCCEEEEEECCCCHHHHHHHHHCCCHHHHCCCCCCCCEECCCCCCCCCCCCCEEEEEC
GMATALSASRATDWFAVAALSSGNLETVARSLRERYPDADLVVLGELGNGEAQARRAAED
CHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHH
ARAYLAWPQFAADARIDGKVPNDFSDMVVLSGFDAVGEHLRAVVRSVVRADGESKSDVPT
HHHEECCCCHHCCCCCCCCCCCCHHHHHEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PSAVTVVEVDKREEDGKMGNVKEKLLGDAGDGPRRRSSKRGASKQEGPDAPATEPASSAA
CCEEEEEEECCCCCCCCCCCHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
APSADSSAAASPAADPPVADAPRFASTRPPVGEPLFGVGDVPNEVRALAEHRFGSPLRMG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
TPRENGGPYRGEVFNTEHYLIQEVATRSVVFHRKDRMTFVNDRLTWMNENARLNGSELQV
CCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCCCCEEECCCCEEECCCCEECCCEEEE
GYDGSQAKVYPWDRARDLLDRTVASLKKSARELNFSPNLEGMLDQLQTRSWARIREARTA
EECCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ALEKSKEQGASREAGTEPDR
HHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TAPYVDEANRARAALAVIPADDYETWVDMAFALKQGFGDEGFEIWDAWSRTAANYDERA
CCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHH
ARTTWRSVSESGGKTLATLFWRAREHGFDLRRTHYPDRMTAVLASSPEVLAQREREEVQR
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHH
QARHAAVAREAVSIWQWARPVGPEHPYLARKHVDPMETLRELDALELHALLGYAPASEER
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
PLTGRVLIVPVWNGPISTLELIDEQGRKSSLAGGAKKGGYWMTEPRLAPAGESSLILVAE
CCCCCEEEEEECCCCHHHHHHHHHCCCHHHHCCCCCCCCEECCCCCCCCCCCCCEEEEEC
GMATALSASRATDWFAVAALSSGNLETVARSLRERYPDADLVVLGELGNGEAQARRAAED
CHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHH
ARAYLAWPQFAADARIDGKVPNDFSDMVVLSGFDAVGEHLRAVVRSVVRADGESKSDVPT
HHHEECCCCHHCCCCCCCCCCCCHHHHHEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PSAVTVVEVDKREEDGKMGNVKEKLLGDAGDGPRRRSSKRGASKQEGPDAPATEPASSAA
CCEEEEEEECCCCCCCCCCCHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
APSADSSAAASPAADPPVADAPRFASTRPPVGEPLFGVGDVPNEVRALAEHRFGSPLRMG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
TPRENGGPYRGEVFNTEHYLIQEVATRSVVFHRKDRMTFVNDRLTWMNENARLNGSELQV
CCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCCCCEEECCCCEEECCCCEECCCEEEE
GYDGSQAKVYPWDRARDLLDRTVASLKKSARELNFSPNLEGMLDQLQTRSWARIREARTA
EECCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ALEKSKEQGASREAGTEPDR
HHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA